RNA–Protein interactions for RNA: ENST00000565634.5

UBFD1-204, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 724 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-204ENST00000565634 CD6P30203 668 aa6.3□□□□□ -1.4
UBFD1-204ENST00000565634 SLC6A4P31645 630 aa6.3□□□□□ -1.4
UBFD1-204ENST00000565634 DEKP35659 375 aaKnown RBP6.3□□□□□ -1.4
UBFD1-204ENST00000565634 HNF1BP35680 557 aa6.3□□□□□ -1.4
UBFD1-204ENST00000565634 ATP5C1P36542 298 aaKnown RBP6.3□□□□□ -1.4
UBFD1-204ENST00000565634 MARCKSL1P49006 195 aa6.3□□□□□ -1.4
UBFD1-204ENST00000565634 VAV2P52735 878 aa6.3□□□□□ -1.4
UBFD1-204ENST00000565634 CLCQ05315 142 aa6.3□□□□□ -1.4
UBFD1-204ENST00000565634 BNIP3Q12983 259 aa6.3□□□□□ -1.4
UBFD1-204ENST00000565634 SKIDA1Q1XH10 827 aa6.3□□□□□ -1.4
UBFD1-204ENST00000565634 LY6G5CQ5SRR4 150 aa6.3□□□□□ -1.4
UBFD1-204ENST00000565634 C10orf76Q5T2E6 689 aa6.3□□□□□ -1.4
UBFD1-204ENST00000565634 DNAJC24Q6P3W2 148 aa6.3□□□□□ -1.4
UBFD1-204ENST00000565634 RFWD3Q6PCD5 774 aa6.3□□□□□ -1.4
UBFD1-204ENST00000565634 FAM131BQ86XD5 332 aa6.3□□□□□ -1.4
UBFD1-204ENST00000565634 TP53INP2Q8IXH6 220 aa6.3□□□□□ -1.4
UBFD1-204ENST00000565634 SRRM1Q8IYB3 904 aaKnown RBP6.3□□□□□ -1.4
UBFD1-204ENST00000565634 C3orf20Q8ND61 904 aa6.3□□□□□ -1.4
UBFD1-204ENST00000565634 ZNF248Q8NDW4 579 aa6.3□□□□□ -1.4
UBFD1-204ENST00000565634 STK35Q8TDR2 534 aa6.3□□□□□ -1.4
UBFD1-204ENST00000565634 KCNE4Q8WWG9 221 aa6.3□□□□□ -1.4
UBFD1-204ENST00000565634 DNASE2BQ8WZ79 361 aa6.3□□□□□ -1.4
UBFD1-204ENST00000565634 IRGQQ8WZA9 623 aa6.3□□□□□ -1.4
UBFD1-204ENST00000565634 EXTL1Q92935 676 aa6.3□□□□□ -1.4
UBFD1-204ENST00000565634 SLC39A13Q96H72 371 aa6.3□□□□□ -1.4
UBFD1-204ENST00000565634 VCPIP1Q96JH7 1222 aa6.3□□□□□ -1.4
UBFD1-204ENST00000565634 SLITRK1Q96PX8 696 aa6.3□□□□□ -1.4
UBFD1-204ENST00000565634 HERPUD2Q9BSE4 406 aa6.3□□□□□ -1.4
UBFD1-204ENST00000565634 SELENOOQ9BVL4 669 aa6.3□□□□□ -1.4
UBFD1-204ENST00000565634 ZDHHC5Q9C0B5 715 aa6.3□□□□□ -1.4
UBFD1-204ENST00000565634 KIF9Q9HAQ2 790 aa6.3□□□□□ -1.4
UBFD1-204ENST00000565634 POPDC2Q9HBU9 364 aa6.3□□□□□ -1.4
UBFD1-204ENST00000565634 LRRC4CQ9HCJ2 640 aa6.3□□□□□ -1.4
UBFD1-204ENST00000565634 TLR8Q9NR97 1041 aaKnown RBP6.3□□□□□ -1.4
UBFD1-204ENST00000565634 ABCC13Q9NSE7 274 aa6.3□□□□□ -1.4
UBFD1-204ENST00000565634 PARVAQ9NVD7 372 aa6.3□□□□□ -1.4
UBFD1-204ENST00000565634 CLIC5Q9NZA1 410 aa6.3□□□□□ -1.4
UBFD1-204ENST00000565634 MARCH2Q9P0N8 246 aa6.3□□□□□ -1.4
UBFD1-204ENST00000565634 CTTNBP2NLQ9P2B4 639 aa6.3□□□□□ -1.4
UBFD1-204ENST00000565634 CFAP97Q9P2B7 532 aa6.3□□□□□ -1.4
UBFD1-204ENST00000565634 RASAL2Q9UJF2 1139 aa6.3□□□□□ -1.4
UBFD1-204ENST00000565634 PACSIN2Q9UNF0 486 aaPredicted RBP6.3□□□□□ -1.4
UBFD1-204ENST00000565634 MFHAS1Q9Y4C4 1052 aa6.3□□□□□ -1.4
UBFD1-204ENST00000565634 ACTL7BQ9Y614 415 aa6.3□□□□□ -1.4
UBFD1-204ENST00000565634 ALG6Q9Y672 507 aa6.3□□□□□ -1.4
UBFD1-204ENST00000565634 CHD5Q8TDI0 1954 aa6.29□□□□□ -1.4
UBFD1-204ENST00000565634 ESPL1Q14674 2120 aa6.29□□□□□ -1.4
UBFD1-204ENST00000565634 CENPEQ02224 2701 aa6.29□□□□□ -1.4
UBFD1-204ENST00000565634 A0A096LPE4 126 aa6.29□□□□□ -1.4
UBFD1-204ENST00000565634 A0A1W2PPZ6 126 aa6.29□□□□□ -1.4
UBFD1-204ENST00000565634 FAM221AA4D161 298 aa6.29□□□□□ -1.4
UBFD1-204ENST00000565634 PMS2P1A4D2B8 440 aa6.29□□□□□ -1.4
UBFD1-204ENST00000565634 GRID2IPA4D2P6 1211 aa6.29□□□□□ -1.4
UBFD1-204ENST00000565634 PRRT4C9JH25 899 aa6.29□□□□□ -1.4
UBFD1-204ENST00000565634 E9PAM4 449 aa6.29□□□□□ -1.4
UBFD1-204ENST00000565634 PDPK1O15530 556 aa6.29□□□□□ -1.4
UBFD1-204ENST00000565634 HSF2BPO75031 334 aa6.29□□□□□ -1.4
UBFD1-204ENST00000565634 ZNF217O75362 1048 aa6.29□□□□□ -1.4
UBFD1-204ENST00000565634 LRCH4O75427 683 aa6.29□□□□□ -1.4
UBFD1-204ENST00000565634 RFPL3O75679 317 aa6.29□□□□□ -1.4
UBFD1-204ENST00000565634 PALMO75781 387 aa6.29□□□□□ -1.4
UBFD1-204ENST00000565634 IGLV3-27P01718 113 aa6.29□□□□□ -1.4
UBFD1-204ENST00000565634 CD48P09326 243 aa6.29□□□□□ -1.4
UBFD1-204ENST00000565634 ZNF883P0CG24 379 aa6.29□□□□□ -1.4
UBFD1-204ENST00000565634 ITGB6P18564 788 aa6.29□□□□□ -1.4
UBFD1-204ENST00000565634 GPD1P21695 349 aa6.29□□□□□ -1.4
UBFD1-204ENST00000565634 COMTP21964 271 aa6.29□□□□□ -1.4
UBFD1-204ENST00000565634 PSMA2P25787 234 aa6.29□□□□□ -1.4
UBFD1-204ENST00000565634 MIPP30301 263 aa6.29□□□□□ -1.4
UBFD1-204ENST00000565634 NTSR1P30989 418 aa6.29□□□□□ -1.4
UBFD1-204ENST00000565634 FBN2P35556 2912 aa6.29□□□□□ -1.4
UBFD1-204ENST00000565634 CYLC1P35663 651 aaPredicted RBP6.29□□□□□ -1.4
UBFD1-204ENST00000565634 GRIA2P42262 883 aa6.29□□□□□ -1.4
UBFD1-204ENST00000565634 GRK6P43250 576 aa6.29□□□□□ -1.4
UBFD1-204ENST00000565634 TNFRSF4P43489 277 aa6.29□□□□□ -1.4
UBFD1-204ENST00000565634 NOP2P46087 812 aaKnown RBP6.29□□□□□ -1.4
UBFD1-204ENST00000565634 CXCR3P49682 368 aa6.29□□□□□ -1.4
UBFD1-204ENST00000565634 SULT1E1P49888 294 aa6.29□□□□□ -1.4
UBFD1-204ENST00000565634 ZNF143P52747 638 aaPredicted RBP6.29□□□□□ -1.4
UBFD1-204ENST00000565634 GYS2P54840 703 aa6.29□□□□□ -1.4
UBFD1-204ENST00000565634 GSCP56915 257 aaPredicted RBP6.29□□□□□ -1.4
UBFD1-204ENST00000565634 TBX4P57082 545 aa6.29□□□□□ -1.4
UBFD1-204ENST00000565634 SLC8A3P57103 927 aa6.29□□□□□ -1.4
UBFD1-204ENST00000565634 SLC7A9P82251 487 aa6.29□□□□□ -1.4
UBFD1-204ENST00000565634 PCDH1Q08174 1060 aa6.29□□□□□ -1.4
UBFD1-204ENST00000565634 ADCY2Q08462 1091 aa6.29□□□□□ -1.4
UBFD1-204ENST00000565634 ANO4Q32M45 955 aa6.29□□□□□ -1.4
UBFD1-204ENST00000565634 SLC25A52Q3SY17 297 aa6.29□□□□□ -1.4
UBFD1-204ENST00000565634 PIK3R6Q5UE93 754 aa6.29□□□□□ -1.4
UBFD1-204ENST00000565634 MSANTD2Q6P1R3 559 aa6.29□□□□□ -1.4
UBFD1-204ENST00000565634 SCYL2Q6P3W7 929 aa6.29□□□□□ -1.4
UBFD1-204ENST00000565634 DCUN1D2Q6PH85 259 aa6.29□□□□□ -1.4
UBFD1-204ENST00000565634 GK5Q6ZS86 529 aa6.29□□□□□ -1.4
UBFD1-204ENST00000565634 RSRC2Q7L4I2 434 aaKnown RBP6.29□□□□□ -1.4
UBFD1-204ENST00000565634 LSRQ86X29 649 aaPredicted RBP6.29□□□□□ -1.4
UBFD1-204ENST00000565634 CIR1Q86X95 450 aaPredicted RBP6.29□□□□□ -1.4
UBFD1-204ENST00000565634 TMEM25Q86YD3 366 aa6.29□□□□□ -1.4
UBFD1-204ENST00000565634 DENND1CQ8IV53 801 aa6.29□□□□□ -1.4
UBFD1-204ENST00000565634 BBS7Q8IWZ6 715 aa6.29□□□□□ -1.4
UBFD1-204ENST00000565634 CHPFQ8IZ52 775 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms