RNA–Protein interactions for RNA: ENST00000565602.5

EDC3-208, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 5

Gene EDC3, Length 1,862 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-208ENST00000565602 SOX9P48436 509 aa18.59■□□□□ 0.57
EDC3-208ENST00000565602 OXCT1P55809 520 aa18.59■□□□□ 0.57
EDC3-208ENST00000565602 ARF5P84085 180 aa18.59■□□□□ 0.57
EDC3-208ENST00000565602 PDE1BQ01064 536 aa18.59■□□□□ 0.57
EDC3-208ENST00000565602 SF3A3Q12874 501 aaKnown RBP eCLIP18.59■□□□□ 0.57
EDC3-208ENST00000565602 SLC12A1Q13621 1099 aa18.59■□□□□ 0.57
EDC3-208ENST00000565602 GEN1Q17RS7 908 aa18.59■□□□□ 0.57
EDC3-208ENST00000565602 TMEM215Q68D42 235 aa18.59■□□□□ 0.57
EDC3-208ENST00000565602 KDELC2Q7Z4H8 507 aa18.59■□□□□ 0.57
EDC3-208ENST00000565602 ZNF557Q8N988 423 aaPredicted RBP18.59■□□□□ 0.57
EDC3-208ENST00000565602 AGAP2Q99490 1192 aa18.59■□□□□ 0.57
EDC3-208ENST00000565602 SPON2Q9BUD6 331 aa18.59■□□□□ 0.57
EDC3-208ENST00000565602 SLC27A6Q9Y2P4 619 aa18.59■□□□□ 0.57
EDC3-208ENST00000565602 STARD13Q9Y3M8 1113 aa18.59■□□□□ 0.57
EDC3-208ENST00000565602 C19orf67A6NJJ6 358 aa18.58■□□□□ 0.57
EDC3-208ENST00000565602 SNAP91O60641 907 aa18.58■□□□□ 0.57
EDC3-208ENST00000565602 CD160O95971 181 aa18.58■□□□□ 0.57
EDC3-208ENST00000565602 PABPC1P11940 636 aaKnown RBP18.58■□□□□ 0.57
EDC3-208ENST00000565602 SERPINB4P48594 390 aa18.58■□□□□ 0.57
EDC3-208ENST00000565602 DGKGP49619 791 aa18.58■□□□□ 0.57
EDC3-208ENST00000565602 SEPT6Q14141 434 aa18.58■□□□□ 0.57
EDC3-208ENST00000565602 PITRM1Q5JRX3 1037 aa18.58■□□□□ 0.57
EDC3-208ENST00000565602 IER5LQ5T953 404 aa18.58■□□□□ 0.57
EDC3-208ENST00000565602 ADIPOR2Q86V24 386 aa18.58■□□□□ 0.57
EDC3-208ENST00000565602 SLC25A41Q8N5S1 370 aa18.58■□□□□ 0.57
EDC3-208ENST00000565602 DCAF4L2Q8NA75 395 aa18.58■□□□□ 0.57
EDC3-208ENST00000565602 ISL2Q96A47 359 aa18.58■□□□□ 0.57
EDC3-208ENST00000565602 RANBP9Q96S59 729 aa18.58■□□□□ 0.57
EDC3-208ENST00000565602 SEMA3CQ99985 751 aa18.58■□□□□ 0.57
EDC3-208ENST00000565602 SLCO1B3Q9NPD5 702 aa18.58■□□□□ 0.57
EDC3-208ENST00000565602 UBA2Q9UBT2 640 aaPredicted RBP18.58■□□□□ 0.57
EDC3-208ENST00000565602 VPS51Q9UID3 782 aa18.58■□□□□ 0.57
EDC3-208ENST00000565602 VPS28Q9UK41 221 aa18.58■□□□□ 0.57
EDC3-208ENST00000565602 ACTL7AQ9Y615 435 aa18.58■□□□□ 0.57
EDC3-208ENST00000565602 HEATR9A2RTY3 570 aa18.58■□□□□ 0.56
EDC3-208ENST00000565602 GLRA3O75311 464 aa18.58■□□□□ 0.56
EDC3-208ENST00000565602 PAMP19021 973 aa18.58■□□□□ 0.56
EDC3-208ENST00000565602 SERPINB8P50452 374 aa18.58■□□□□ 0.56
EDC3-208ENST00000565602 SERPINH1P50454 418 aaKnown RBP18.58■□□□□ 0.56
EDC3-208ENST00000565602 ALG1LQ6GMV1 187 aa18.58■□□□□ 0.56
EDC3-208ENST00000565602 DNASE1L2Q92874 299 aa18.58■□□□□ 0.56
EDC3-208ENST00000565602 MANSC1Q9H8J5 431 aa18.58■□□□□ 0.56
EDC3-208ENST00000565602 TREX1Q9NSU2 369 aa18.58■□□□□ 0.56
EDC3-208ENST00000565602 VCANP13611 3396 aa18.57■□□□□ 0.56
EDC3-208ENST00000565602 MUSKO15146 869 aa18.57■□□□□ 0.56
EDC3-208ENST00000565602 TIMM44O43615 452 aa18.57■□□□□ 0.56
EDC3-208ENST00000565602 BMP1P13497 986 aa18.57■□□□□ 0.56
EDC3-208ENST00000565602 EIF2DP41214 584 aaKnown RBP18.57■□□□□ 0.56
EDC3-208ENST00000565602 MAGEA12P43365 314 aa18.57■□□□□ 0.56
EDC3-208ENST00000565602 TDGQ13569 410 aa18.57■□□□□ 0.56
EDC3-208ENST00000565602 IHHQ14623 411 aa18.57■□□□□ 0.56
EDC3-208ENST00000565602 RNF187Q5TA31 235 aaPredicted RBP18.57■□□□□ 0.56
EDC3-208ENST00000565602 KIAA0930Q6ICG6 404 aaPredicted RBP18.57■□□□□ 0.56
EDC3-208ENST00000565602 CCDC121Q6ZUS5 278 aa18.57■□□□□ 0.56
EDC3-208ENST00000565602 CNTN4Q8IWV2 1026 aa18.57■□□□□ 0.56
EDC3-208ENST00000565602 DCLK2Q8N568 766 aa18.57■□□□□ 0.56
EDC3-208ENST00000565602 CSGALNACT1Q8TDX6 532 aa18.57■□□□□ 0.56
EDC3-208ENST00000565602 MGME1Q9BQP7 344 aa18.57■□□□□ 0.56
EDC3-208ENST00000565602 DEC1Q9P2X7 70 aa18.57■□□□□ 0.56
EDC3-208ENST00000565602 SEPT3Q9UH03 358 aa18.57■□□□□ 0.56
EDC3-208ENST00000565602 ARL2BPQ9Y2Y0 163 aa18.57■□□□□ 0.56
EDC3-208ENST00000565602 TTC24A2A3L6 582 aaPredicted RBP18.56■□□□□ 0.56
EDC3-208ENST00000565602 CBX4O00257 560 aa18.56■□□□□ 0.56
EDC3-208ENST00000565602 PDE1CQ14123 709 aaPredicted RBP18.56■□□□□ 0.56
EDC3-208ENST00000565602 RFTN1Q14699 578 aaPredicted RBP18.56■□□□□ 0.56
EDC3-208ENST00000565602 ESRP1Q6NXG1 681 aaKnown RBP18.56■□□□□ 0.56
EDC3-208ENST00000565602 SFTPA1Q8IWL2 248 aa18.56■□□□□ 0.56
EDC3-208ENST00000565602 AHI1Q8N157 1196 aa18.56■□□□□ 0.56
EDC3-208ENST00000565602 OTUD6BQ8N6M0 293 aa18.56■□□□□ 0.56
EDC3-208ENST00000565602 ARMC2Q8NEN0 867 aa18.56■□□□□ 0.56
EDC3-208ENST00000565602 FEM1CQ96JP0 617 aa18.56■□□□□ 0.56
EDC3-208ENST00000565602 PLCD4Q9BRC7 762 aa18.56■□□□□ 0.56
EDC3-208ENST00000565602 MCMBPQ9BTE3 642 aa18.56■□□□□ 0.56
EDC3-208ENST00000565602 CINPQ9BW66 212 aaPredicted RBP18.56■□□□□ 0.56
EDC3-208ENST00000565602 SLC2A4RGQ9NR83 387 aa18.56■□□□□ 0.56
EDC3-208ENST00000565602 SNX15Q9NRS6 342 aa18.56■□□□□ 0.56
EDC3-208ENST00000565602 SRFP11831 508 aa18.56■□□□□ 0.56
EDC3-208ENST00000565602 NEFHP12036 1026 aa18.56■□□□□ 0.56
EDC3-208ENST00000565602 TYK2P29597 1187 aa18.56■□□□□ 0.56
EDC3-208ENST00000565602 CTSOP43234 321 aaPredicted RBP18.56■□□□□ 0.56
EDC3-208ENST00000565602 ARCN1P48444 511 aaKnown RBP18.56■□□□□ 0.56
EDC3-208ENST00000565602 CORO7P57737 925 aa18.56■□□□□ 0.56
EDC3-208ENST00000565602 KDSRQ06136 332 aa18.56■□□□□ 0.56
EDC3-208ENST00000565602 DMC1Q14565 340 aa18.56■□□□□ 0.56
EDC3-208ENST00000565602 SLC14A2Q15849 920 aa18.56■□□□□ 0.56
EDC3-208ENST00000565602 GRAMD4Q6IC98 578 aa18.56■□□□□ 0.56
EDC3-208ENST00000565602 FSTL4Q6MZW2 842 aa18.56■□□□□ 0.56
EDC3-208ENST00000565602 TXNDC11Q6PKC3 985 aa18.56■□□□□ 0.56
EDC3-208ENST00000565602 LINGO4Q6UY18 593 aa18.56■□□□□ 0.56
EDC3-208ENST00000565602 KYAT3Q6YP21 454 aaKnown RBP18.56■□□□□ 0.56
EDC3-208ENST00000565602 TRIM42Q8IWZ5 723 aa18.56■□□□□ 0.56
EDC3-208ENST00000565602 PTPRN2Q92932 1015 aa18.56■□□□□ 0.56
EDC3-208ENST00000565602 ACDQ96AP0 544 aa18.56■□□□□ 0.56
EDC3-208ENST00000565602 ATXN7L3BQ96GX2 97 aa18.56■□□□□ 0.56
EDC3-208ENST00000565602 C2orf49Q9BVC5 232 aaPredicted RBP18.56■□□□□ 0.56
EDC3-208ENST00000565602 FBRSL1Q9HCM7 1045 aaKnown RBP18.56■□□□□ 0.56
EDC3-208ENST00000565602 HEBP1Q9NRV9 189 aa18.56■□□□□ 0.56
EDC3-208ENST00000565602 SLC2A6Q9UGQ3 507 aa18.56■□□□□ 0.56
EDC3-208ENST00000565602 LOC285095A0A1B0GVY8 99 aa18.55■□□□□ 0.56
EDC3-208ENST00000565602 SHISA7A6NL88 538 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms