RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 RPS6KA2Q15349 733 aa20.58■□□□□ 0.89
MAP1LC3B-206ENST00000564844 STRADAQ7RTN6 431 aa20.58■□□□□ 0.89
MAP1LC3B-206ENST00000564844 GABPB2Q8TAK5 448 aaPredicted RBP20.58■□□□□ 0.89
MAP1LC3B-206ENST00000564844 NUDT8Q8WV74 236 aa20.58■□□□□ 0.89
MAP1LC3B-206ENST00000564844 SLC25A23Q9BV35 468 aa20.58■□□□□ 0.89
MAP1LC3B-206ENST00000564844 MAP10Q9P2G4 905 aa20.58■□□□□ 0.89
MAP1LC3B-206ENST00000564844 ADAMTS5Q9UNA0 930 aa20.58■□□□□ 0.89
MAP1LC3B-206ENST00000564844 NOL3O60936 208 aaKnown RBP20.58■□□□□ 0.88
MAP1LC3B-206ENST00000564844 FOXA1P55317 472 aa20.58■□□□□ 0.88
MAP1LC3B-206ENST00000564844 LSM3P62310 102 aaKnown RBP20.58■□□□□ 0.88
MAP1LC3B-206ENST00000564844 CELF3Q5SZQ8 465 aaKnown RBP20.58■□□□□ 0.88
MAP1LC3B-206ENST00000564844 BTBD8Q5XKL5 378 aa20.58■□□□□ 0.88
MAP1LC3B-206ENST00000564844 PIM3Q86V86 326 aa20.58■□□□□ 0.88
MAP1LC3B-206ENST00000564844 DHRSXQ8N5I4 330 aa20.58■□□□□ 0.88
MAP1LC3B-206ENST00000564844 FLAD1Q8NFF5 587 aa20.58■□□□□ 0.88
MAP1LC3B-206ENST00000564844 SLAMF8Q9P0V8 285 aa20.58■□□□□ 0.88
MAP1LC3B-206ENST00000564844 LAMA2P24043 3122 aaKnown RBP20.58■□□□□ 0.88
MAP1LC3B-206ENST00000564844 YJEFN3A6XGL0 299 aa20.57■□□□□ 0.88
MAP1LC3B-206ENST00000564844 BAIAP3O94812 1187 aa20.57■□□□□ 0.88
MAP1LC3B-206ENST00000564844 YBX3P16989 372 aaKnown RBP eCLIP20.57■□□□□ 0.881e-7■■□□□ 13.9
MAP1LC3B-206ENST00000564844 ATP5F1P24539 256 aaPredicted RBP20.57■□□□□ 0.88
MAP1LC3B-206ENST00000564844 PSMA4P25789 261 aaKnown RBP20.57■□□□□ 0.88
MAP1LC3B-206ENST00000564844 ADRA1BP35368 520 aa20.57■□□□□ 0.88
MAP1LC3B-206ENST00000564844 OAZ1P54368 228 aa20.57■□□□□ 0.88
MAP1LC3B-206ENST00000564844 IMPG1Q17R60 797 aa20.57■□□□□ 0.88
MAP1LC3B-206ENST00000564844 KCTD11Q693B1 232 aa20.57■□□□□ 0.88
MAP1LC3B-206ENST00000564844 SLC15A3Q8IY34 581 aa20.57■□□□□ 0.88
MAP1LC3B-206ENST00000564844 ACDQ96AP0 544 aa20.57■□□□□ 0.88
MAP1LC3B-206ENST00000564844 MPHOSPH6Q99547 160 aaKnown RBP20.57■□□□□ 0.88
MAP1LC3B-206ENST00000564844 GBA3Q9H227 469 aa20.57■□□□□ 0.88
MAP1LC3B-206ENST00000564844 NXF3Q9H4D5 531 aaKnown RBP20.57■□□□□ 0.88
MAP1LC3B-206ENST00000564844 GPRC5DQ9NZD1 345 aa20.57■□□□□ 0.88
MAP1LC3B-206ENST00000564844 CRYL1Q9Y2S2 319 aa20.57■□□□□ 0.88
MAP1LC3B-206ENST00000564844 C22orf31O95567 290 aa20.57■□□□□ 0.88
MAP1LC3B-206ENST00000564844 HSPA1AP0DMV8 641 aaKnown RBP20.57■□□□□ 0.88
MAP1LC3B-206ENST00000564844 HSPA1BP0DMV9 641 aaKnown RBP20.57■□□□□ 0.88
MAP1LC3B-206ENST00000564844 CAPN3P20807 821 aa20.57■□□□□ 0.88
MAP1LC3B-206ENST00000564844 NOS2P35228 1153 aa20.57■□□□□ 0.88
MAP1LC3B-206ENST00000564844 TKTL1P51854 596 aa20.57■□□□□ 0.88
MAP1LC3B-206ENST00000564844 SNX16P57768 344 aa20.57■□□□□ 0.88
MAP1LC3B-206ENST00000564844 DHRS4L2Q6PKH6 230 aa20.57■□□□□ 0.88
MAP1LC3B-206ENST00000564844 PIWIL4Q7Z3Z4 852 aaKnown RBP20.57■□□□□ 0.88
MAP1LC3B-206ENST00000564844 DCBLD1Q8N8Z6 715 aa20.57■□□□□ 0.88
MAP1LC3B-206ENST00000564844 HDAC11Q96DB2 347 aa20.57■□□□□ 0.88
MAP1LC3B-206ENST00000564844 MAELQ96JY0 434 aaKnown RBP20.57■□□□□ 0.88
MAP1LC3B-206ENST00000564844 MUS81Q96NY9 551 aa20.57■□□□□ 0.88
MAP1LC3B-206ENST00000564844 HEPHQ9BQS7 1158 aa20.57■□□□□ 0.88
MAP1LC3B-206ENST00000564844 AKTIPQ9H8T0 292 aa20.57■□□□□ 0.88
MAP1LC3B-206ENST00000564844 EXD2Q9NVH0 621 aa20.57■□□□□ 0.88
MAP1LC3B-206ENST00000564844 TBCCD1Q9NVR7 557 aa20.57■□□□□ 0.88
MAP1LC3B-206ENST00000564844 CAMSAP3Q9P1Y5 1249 aaPredicted RBP20.57■□□□□ 0.88
MAP1LC3B-206ENST00000564844 USP17L7P0C7H9 530 aa20.57■□□□□ 0.88
MAP1LC3B-206ENST00000564844 LINC00032P0C843 101 aa20.57■□□□□ 0.88
MAP1LC3B-206ENST00000564844 ARNTP27540 789 aa20.57■□□□□ 0.88
MAP1LC3B-206ENST00000564844 ADSLP30566 484 aaPredicted RBP20.57■□□□□ 0.88
MAP1LC3B-206ENST00000564844 OXCT1P55809 520 aa20.57■□□□□ 0.88
MAP1LC3B-206ENST00000564844 ALDH16A1Q8IZ83 802 aa20.57■□□□□ 0.88
MAP1LC3B-206ENST00000564844 TMCO5AQ8N6Q1 288 aa20.57■□□□□ 0.88
MAP1LC3B-206ENST00000564844 ANKFN1Q8N957 763 aa20.57■□□□□ 0.88
MAP1LC3B-206ENST00000564844 IFT80Q9P2H3 777 aaPredicted RBP20.57■□□□□ 0.88
MAP1LC3B-206ENST00000564844 ANKRD6Q9Y2G4 727 aa20.57■□□□□ 0.88
MAP1LC3B-206ENST00000564844 OR51F1A6NGY5 319 aa20.56■□□□□ 0.88
MAP1LC3B-206ENST00000564844 CFAP99D6REC4 459 aa20.56■□□□□ 0.88
MAP1LC3B-206ENST00000564844 ANGPT2O15123 496 aa20.56■□□□□ 0.88
MAP1LC3B-206ENST00000564844 TSPAN1O60635 241 aa20.56■□□□□ 0.88
MAP1LC3B-206ENST00000564844 XYLBO75191 536 aa20.56■□□□□ 0.88
MAP1LC3B-206ENST00000564844 BMP2P12643 396 aa20.56■□□□□ 0.88
MAP1LC3B-206ENST00000564844 ALDH4A1P30038 563 aa20.56■□□□□ 0.88
MAP1LC3B-206ENST00000564844 NFATC3Q12968 1075 aa20.56■□□□□ 0.88
MAP1LC3B-206ENST00000564844 GPR158Q5T848 1215 aa20.56■□□□□ 0.88
MAP1LC3B-206ENST00000564844 DCAF15Q66K64 600 aa20.56■□□□□ 0.88
MAP1LC3B-206ENST00000564844 CYHR1Q6ZMK1 362 aa20.56■□□□□ 0.88
MAP1LC3B-206ENST00000564844 RDH11Q8TC12 318 aa20.56■□□□□ 0.88
MAP1LC3B-206ENST00000564844 TRPM4Q8TD43 1214 aa20.56■□□□□ 0.88
MAP1LC3B-206ENST00000564844 KCNN1Q92952 543 aa20.56■□□□□ 0.88
MAP1LC3B-206ENST00000564844 ZNF419Q96HQ0 510 aaPredicted RBP20.56■□□□□ 0.88
MAP1LC3B-206ENST00000564844 ZBED3Q96IU2 234 aaPredicted RBP20.56■□□□□ 0.88
MAP1LC3B-206ENST00000564844 ULBP1Q9BZM6 244 aa20.56■□□□□ 0.88
MAP1LC3B-206ENST00000564844 CMTM6Q9NX76 183 aa20.56■□□□□ 0.88
MAP1LC3B-206ENST00000564844 ZNHIT2Q9UHR6 403 aa20.56■□□□□ 0.88
MAP1LC3B-206ENST00000564844 TSC22D4Q9Y3Q8 395 aa20.56■□□□□ 0.88
MAP1LC3B-206ENST00000564844 MYF6P23409 242 aa20.56■□□□□ 0.88
MAP1LC3B-206ENST00000564844 MAPRE2Q15555 327 aa20.56■□□□□ 0.88
MAP1LC3B-206ENST00000564844 PYCR3Q53H96 274 aa20.56■□□□□ 0.88
MAP1LC3B-206ENST00000564844 SLC7A5P1Q8MH63 180 aa20.56■□□□□ 0.88
MAP1LC3B-206ENST00000564844 DQX1Q8TE96 717 aaKnown RBP20.56■□□□□ 0.88
MAP1LC3B-206ENST00000564844 NSUN5Q96P11 429 aaKnown RBP20.56■□□□□ 0.88
MAP1LC3B-206ENST00000564844 MRPL57Q9BQC6 102 aaKnown RBP20.56■□□□□ 0.88
MAP1LC3B-206ENST00000564844 ING2Q9H160 280 aa20.56■□□□□ 0.88
MAP1LC3B-206ENST00000564844 TSPYL2Q9H2G4 693 aaPredicted RBP20.56■□□□□ 0.88
MAP1LC3B-206ENST00000564844 CCM2LQ9NUG4 571 aaPredicted RBP20.56■□□□□ 0.88
MAP1LC3B-206ENST00000564844 TBC1D13Q9NVG8 400 aa20.56■□□□□ 0.88
MAP1LC3B-206ENST00000564844 FBXO5Q9UKT4 447 aa20.56■□□□□ 0.88
MAP1LC3B-206ENST00000564844 TMEM247A6NEH6 219 aa20.55■□□□□ 0.88
MAP1LC3B-206ENST00000564844 RSL1D1O76021 490 aaKnown RBP20.55■□□□□ 0.88
MAP1LC3B-206ENST00000564844 IPO13O94829 963 aaKnown RBP20.55■□□□□ 0.88
MAP1LC3B-206ENST00000564844 BCL10O95999 233 aa20.55■□□□□ 0.88
MAP1LC3B-206ENST00000564844 CPB1P15086 417 aa20.55■□□□□ 0.88
MAP1LC3B-206ENST00000564844 IL7RP16871 459 aa20.55■□□□□ 0.88
MAP1LC3B-206ENST00000564844 TRIM16LQ309B1 348 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms