RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 TSPAN6O43657 245 aa10.69□□□□□ -0.7
HDGFL3-204ENST00000563790 CCDC130P13994 396 aa10.69□□□□□ -0.7
HDGFL3-204ENST00000563790 EGR1P18146 543 aa10.69□□□□□ -0.7
HDGFL3-204ENST00000563790 HTR1BP28222 390 aa10.69□□□□□ -0.7
HDGFL3-204ENST00000563790 RBPJQ06330 500 aa10.69□□□□□ -0.7
HDGFL3-204ENST00000563790 TFF3Q07654 80 aa10.69□□□□□ -0.7
HDGFL3-204ENST00000563790 C3AR1Q16581 482 aa10.69□□□□□ -0.7
HDGFL3-204ENST00000563790 HIF1AQ16665 826 aa10.69□□□□□ -0.7
HDGFL3-204ENST00000563790 FAM199XQ6PEV8 388 aaPredicted RBP10.69□□□□□ -0.7
HDGFL3-204ENST00000563790 FOXR2Q6PJQ5 311 aa10.69□□□□□ -0.7
HDGFL3-204ENST00000563790 CLEC20AQ6ZU45 233 aa10.69□□□□□ -0.7
HDGFL3-204ENST00000563790 HIPK1Q86Z02 1210 aa10.69□□□□□ -0.7
HDGFL3-204ENST00000563790 IRF2BP1Q8IU81 584 aa10.69□□□□□ -0.7
HDGFL3-204ENST00000563790 GALNT16Q8N428 558 aa10.69□□□□□ -0.7
HDGFL3-204ENST00000563790 SLC2A14Q8TDB8 520 aa10.69□□□□□ -0.7
HDGFL3-204ENST00000563790 PPP1R16AQ96I34 528 aa10.69□□□□□ -0.7
HDGFL3-204ENST00000563790 TNIP3Q96KP6 325 aa10.69□□□□□ -0.7
HDGFL3-204ENST00000563790 AMBRA1Q9C0C7 1298 aa10.69□□□□□ -0.7
HDGFL3-204ENST00000563790 MBNL1Q9NR56 388 aaKnown RBP10.69□□□□□ -0.7
HDGFL3-204ENST00000563790 SPATS2LQ9NUQ6 558 aaKnown RBP10.69□□□□□ -0.7
HDGFL3-204ENST00000563790 TINAGQ9UJW2 476 aa10.69□□□□□ -0.7
HDGFL3-204ENST00000563790 MEMO1Q9Y316 297 aa10.69□□□□□ -0.7
HDGFL3-204ENST00000563790 FREM1Q5H8C1 2179 aa10.68□□□□□ -0.7
HDGFL3-204ENST00000563790 GOLGA6L7A0A1B0GV03 622 aa10.68□□□□□ -0.7
HDGFL3-204ENST00000563790 RASA4BC9J798 803 aa10.68□□□□□ -0.7
HDGFL3-204ENST00000563790 ARHGEF9O43307 516 aa10.68□□□□□ -0.7
HDGFL3-204ENST00000563790 RASA4O43374 803 aa10.68□□□□□ -0.7
HDGFL3-204ENST00000563790 BNIP3LO60238 219 aa10.68□□□□□ -0.7
HDGFL3-204ENST00000563790 SLC19A2O60779 497 aa10.68□□□□□ -0.7
HDGFL3-204ENST00000563790 SPAG6O75602 509 aa10.68□□□□□ -0.7
HDGFL3-204ENST00000563790 ECEL1O95672 775 aa10.68□□□□□ -0.7
HDGFL3-204ENST00000563790 FGF1P05230 155 aa10.68□□□□□ -0.7
HDGFL3-204ENST00000563790 HMGB1P09429 215 aaKnown RBP10.68□□□□□ -0.7
HDGFL3-204ENST00000563790 ARCN1P48444 511 aaKnown RBP10.68□□□□□ -0.7
HDGFL3-204ENST00000563790 BIRC2Q13490 618 aa10.68□□□□□ -0.7
HDGFL3-204ENST00000563790 SLC12A1Q13621 1099 aa10.68□□□□□ -0.7
HDGFL3-204ENST00000563790 ATP1A4Q13733 1029 aa10.68□□□□□ -0.7
HDGFL3-204ENST00000563790 KRT32Q14532 448 aa10.68□□□□□ -0.7
HDGFL3-204ENST00000563790 INPP5AQ14642 412 aa10.68□□□□□ -0.7
HDGFL3-204ENST00000563790 ZNF174Q15697 407 aa10.68□□□□□ -0.7
HDGFL3-204ENST00000563790 PDCD2Q16342 344 aaPredicted RBP10.68□□□□□ -0.7
HDGFL3-204ENST00000563790 CBARPQ8N350 705 aaPredicted RBP10.68□□□□□ -0.7
HDGFL3-204ENST00000563790 ZBTB2Q8N680 514 aa10.68□□□□□ -0.7
HDGFL3-204ENST00000563790 PPM1NQ8N819 430 aa10.68□□□□□ -0.7
HDGFL3-204ENST00000563790 TP53I13Q8NBR0 393 aaPredicted RBP10.68□□□□□ -0.7
HDGFL3-204ENST00000563790 OR2A12Q8NGT7 310 aa10.68□□□□□ -0.7
HDGFL3-204ENST00000563790 CCL4L1Q8NHW4 92 aa10.68□□□□□ -0.7
HDGFL3-204ENST00000563790 DNAJB14Q8TBM8 379 aa10.68□□□□□ -0.7
HDGFL3-204ENST00000563790 ZDHHC1Q8WTX9 485 aa10.68□□□□□ -0.7
HDGFL3-204ENST00000563790 TAF4BQ92750 862 aa10.68□□□□□ -0.7
HDGFL3-204ENST00000563790 RNF34Q969K3 372 aa10.68□□□□□ -0.7
HDGFL3-204ENST00000563790 JAKMIP2Q96AA8 810 aa10.68□□□□□ -0.7
HDGFL3-204ENST00000563790 MYEOVQ96EZ4 313 aa10.68□□□□□ -0.7
HDGFL3-204ENST00000563790 AHCYL2Q96HN2 611 aaKnown RBP10.68□□□□□ -0.7
HDGFL3-204ENST00000563790 ANKRD36BP1Q96IX9 119 aa10.68□□□□□ -0.7
HDGFL3-204ENST00000563790 LCORQ96JN0 433 aaPredicted RBP10.68□□□□□ -0.7
HDGFL3-204ENST00000563790 GPATCH1Q9BRR8 931 aaKnown RBP10.68□□□□□ -0.7
HDGFL3-204ENST00000563790 FEM1AQ9BSK4 669 aa10.68□□□□□ -0.7
HDGFL3-204ENST00000563790 TMEM168Q9H0V1 697 aa10.68□□□□□ -0.7
HDGFL3-204ENST00000563790 IKZF4Q9H2S9 585 aa10.68□□□□□ -0.7
HDGFL3-204ENST00000563790 SLC25A13Q9UJS0 675 aa10.68□□□□□ -0.7
HDGFL3-204ENST00000563790 K7ENM7 598 aa10.67□□□□□ -0.7
HDGFL3-204ENST00000563790 TULP1O00294 542 aaPredicted RBP10.67□□□□□ -0.7
HDGFL3-204ENST00000563790 ANKRD34CP0C6C1 535 aa10.67□□□□□ -0.7
HDGFL3-204ENST00000563790 FAM200BP0CF97 657 aa10.67□□□□□ -0.7
HDGFL3-204ENST00000563790 FGF5P12034 268 aa10.67□□□□□ -0.7
HDGFL3-204ENST00000563790 NUMBP49757 651 aa10.67□□□□□ -0.7
HDGFL3-204ENST00000563790 PLK1P53350 603 aa10.67□□□□□ -0.7
HDGFL3-204ENST00000563790 RAPGEF1Q13905 1077 aa10.67□□□□□ -0.7
HDGFL3-204ENST00000563790 TOB2Q14106 344 aaPredicted RBP10.67□□□□□ -0.7
HDGFL3-204ENST00000563790 KEAP1Q14145 624 aa10.67□□□□□ -0.7
HDGFL3-204ENST00000563790 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.67□□□□□ -0.7
HDGFL3-204ENST00000563790 IZUMO3Q5VZ72 239 aa10.67□□□□□ -0.7
HDGFL3-204ENST00000563790 ANKRD40Q6AI12 368 aa10.67□□□□□ -0.7
HDGFL3-204ENST00000563790 CDC20BQ86Y33 519 aa10.67□□□□□ -0.7
HDGFL3-204ENST00000563790 OR10G6Q8NH81 332 aa10.67□□□□□ -0.7
HDGFL3-204ENST00000563790 GOT1L1Q8NHS2 421 aaPredicted RBP10.67□□□□□ -0.7
HDGFL3-204ENST00000563790 POMGNT1Q8WZA1 660 aa10.67□□□□□ -0.7
HDGFL3-204ENST00000563790 TNFRSF25Q93038 417 aa10.67□□□□□ -0.7
HDGFL3-204ENST00000563790 WDR92Q96MX6 357 aa10.67□□□□□ -0.7
HDGFL3-204ENST00000563790 OR6C1Q96RD1 312 aa10.67□□□□□ -0.7
HDGFL3-204ENST00000563790 FAM213AQ9BRX8 229 aa10.67□□□□□ -0.7
HDGFL3-204ENST00000563790 RNF32Q9H0A6 362 aa10.67□□□□□ -0.7
HDGFL3-204ENST00000563790 ZHX3Q9H4I2 956 aa10.67□□□□□ -0.7
HDGFL3-204ENST00000563790 C1GALT1Q9NS00 363 aa10.67□□□□□ -0.7
HDGFL3-204ENST00000563790 RASSF1Q9NS23 344 aa10.67□□□□□ -0.7
HDGFL3-204ENST00000563790 INTS13Q9NVM9 706 aa10.67□□□□□ -0.7
HDGFL3-204ENST00000563790 RBAKQ9NYW8 714 aaPredicted RBP10.67□□□□□ -0.7
HDGFL3-204ENST00000563790 SLC30A1Q9Y6M5 507 aa10.67□□□□□ -0.7
HDGFL3-204ENST00000563790 WASF2Q9Y6W5 498 aa10.67□□□□□ -0.7
HDGFL3-204ENST00000563790 SCN2AQ99250 2005 aa10.67□□□□□ -0.7
HDGFL3-204ENST00000563790 FAM237BA0A1B0GVD1 139 aa10.66□□□□□ -0.7
HDGFL3-204ENST00000563790 ALX3O95076 343 aa10.66□□□□□ -0.7
HDGFL3-204ENST00000563790 RPS6KB1P23443 525 aa10.66□□□□□ -0.7
HDGFL3-204ENST00000563790 SCNN1AP37088 669 aa10.66□□□□□ -0.7
HDGFL3-204ENST00000563790 SLC11A2P49281 568 aa10.66□□□□□ -0.7
HDGFL3-204ENST00000563790 SOX8P57073 446 aa10.66□□□□□ -0.7
HDGFL3-204ENST00000563790 TNNC1P63316 161 aa10.66□□□□□ -0.7
HDGFL3-204ENST00000563790 IRX6P78412 446 aaPredicted RBP10.66□□□□□ -0.7
HDGFL3-204ENST00000563790 NRG1Q02297 640 aaPredicted RBP10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms