RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 EIF3CLB5ME19 914 aaKnown RBP5.76□□□□□ -1.49
LINC00557-201ENST00000563184 BDNFP23560 247 aa5.76□□□□□ -1.49
LINC00557-201ENST00000563184 RFX2P48378 723 aa5.76□□□□□ -1.49
LINC00557-201ENST00000563184 ARF3P61204 181 aaPredicted RBP5.76□□□□□ -1.49
LINC00557-201ENST00000563184 ARF1P84077 181 aaKnown RBP5.76□□□□□ -1.49
LINC00557-201ENST00000563184 ST3GAL1Q11201 340 aa5.76□□□□□ -1.49
LINC00557-201ENST00000563184 OLIG2Q13516 323 aa5.76□□□□□ -1.49
LINC00557-201ENST00000563184 C2orf68Q2NKX9 166 aa5.76□□□□□ -1.49
LINC00557-201ENST00000563184 DCAF6Q58WW2 860 aa5.76□□□□□ -1.49
LINC00557-201ENST00000563184 ITPRIPL1Q6GPH6 555 aa5.76□□□□□ -1.49
LINC00557-201ENST00000563184 ANKRD54Q6NXT1 300 aa5.76□□□□□ -1.49
LINC00557-201ENST00000563184 TECPR1Q7Z6L1 1165 aa5.76□□□□□ -1.49
LINC00557-201ENST00000563184 PALB2Q86YC2 1186 aa5.76□□□□□ -1.49
LINC00557-201ENST00000563184 ZBTB2Q8N680 514 aa5.76□□□□□ -1.49
LINC00557-201ENST00000563184 MIGA1Q8NAN2 632 aa5.76□□□□□ -1.49
LINC00557-201ENST00000563184 ARHGEF2Q92974 986 aaKnown RBP5.76□□□□□ -1.49
LINC00557-201ENST00000563184 PPP1R13BQ96KQ4 1090 aa5.76□□□□□ -1.49
LINC00557-201ENST00000563184 CAMK1GQ96NX5 476 aa5.76□□□□□ -1.49
LINC00557-201ENST00000563184 SLITRK1Q96PX8 696 aa5.76□□□□□ -1.49
LINC00557-201ENST00000563184 C1QTNF5Q9BXJ0 243 aa5.76□□□□□ -1.49
LINC00557-201ENST00000563184 FAM234AQ9H0X4 552 aa5.76□□□□□ -1.49
LINC00557-201ENST00000563184 GHITMQ9H3K2 345 aa5.76□□□□□ -1.49
LINC00557-201ENST00000563184 CISD1Q9NZ45 108 aaKnown RBP5.76□□□□□ -1.49
LINC00557-201ENST00000563184 CNOT8Q9UFF9 292 aaKnown RBP5.76□□□□□ -1.49
LINC00557-201ENST00000563184 FBXO9Q9UK97 447 aaPredicted RBP5.76□□□□□ -1.49
LINC00557-201ENST00000563184 AAR2Q9Y312 384 aaKnown RBP5.76□□□□□ -1.49
LINC00557-201ENST00000563184 FAM237AA0A1B0GTK4 181 aa5.75□□□□□ -1.49
LINC00557-201ENST00000563184 A0A1B0GVT2 93 aa5.75□□□□□ -1.49
LINC00557-201ENST00000563184 INAFM1C9JVW0 142 aa5.75□□□□□ -1.49
LINC00557-201ENST00000563184 SPRY3O43610 288 aa5.75□□□□□ -1.49
LINC00557-201ENST00000563184 RARGP13631 454 aa5.75□□□□□ -1.49
LINC00557-201ENST00000563184 CDH2P19022 906 aaPredicted RBP5.75□□□□□ -1.49
LINC00557-201ENST00000563184 CHATP28329 748 aa5.75□□□□□ -1.49
LINC00557-201ENST00000563184 PIGAP37287 484 aa5.75□□□□□ -1.49
LINC00557-201ENST00000563184 HADHAP40939 763 aa5.75□□□□□ -1.49
LINC00557-201ENST00000563184 ENTPD1P49961 510 aa5.75□□□□□ -1.49
LINC00557-201ENST00000563184 F2RL1P55085 397 aa5.75□□□□□ -1.49
LINC00557-201ENST00000563184 FOXD4Q12950 439 aaPredicted RBP5.75□□□□□ -1.49
LINC00557-201ENST00000563184 SHBQ15464 509 aa5.75□□□□□ -1.49
LINC00557-201ENST00000563184 MEA1Q16626 185 aa5.75□□□□□ -1.49
LINC00557-201ENST00000563184 CFAP161Q6P656 301 aa5.75□□□□□ -1.49
LINC00557-201ENST00000563184 KLHL24Q6TFL4 600 aa5.75□□□□□ -1.49
LINC00557-201ENST00000563184 MTSS1LQ765P7 747 aa5.75□□□□□ -1.49
LINC00557-201ENST00000563184 HAPLN4Q86UW8 402 aa5.75□□□□□ -1.49
LINC00557-201ENST00000563184 ARHGAP12Q8IWW6 846 aa5.75□□□□□ -1.49
LINC00557-201ENST00000563184 CCDC105Q8IYK2 499 aa5.75□□□□□ -1.49
LINC00557-201ENST00000563184 PELI3Q8N2H9 469 aa5.75□□□□□ -1.49
LINC00557-201ENST00000563184 WDTC1Q8N5D0 677 aa5.75□□□□□ -1.49
LINC00557-201ENST00000563184 PDILTQ8N807 584 aa5.75□□□□□ -1.49
LINC00557-201ENST00000563184 BEST2Q8NFU1 509 aa5.75□□□□□ -1.49
LINC00557-201ENST00000563184 SLC41A2Q96JW4 573 aa5.75□□□□□ -1.49
LINC00557-201ENST00000563184 FAM110AQ9BQ89 295 aa5.75□□□□□ -1.49
LINC00557-201ENST00000563184 ESRP2Q9H6T0 727 aaKnown RBP5.75□□□□□ -1.49
LINC00557-201ENST00000563184 EIF2B3Q9NR50 452 aaKnown RBP5.75□□□□□ -1.49
LINC00557-201ENST00000563184 HCFC1R1Q9NWW0 138 aa5.75□□□□□ -1.49
LINC00557-201ENST00000563184 EHD2Q9NZN4 543 aa5.75□□□□□ -1.49
LINC00557-201ENST00000563184 ANKRD18BA2A2Z9 1011 aa5.74□□□□□ -1.49
LINC00557-201ENST00000563184 FAM90A8PA6NJQ4 464 aa5.74□□□□□ -1.49
LINC00557-201ENST00000563184 H3BNX3 289 aa5.74□□□□□ -1.49
LINC00557-201ENST00000563184 TIMM23O14925 209 aa5.74□□□□□ -1.49
LINC00557-201ENST00000563184 TIPRLO75663 272 aa5.74□□□□□ -1.49
LINC00557-201ENST00000563184 GFPT2O94808 682 aa5.74□□□□□ -1.49
LINC00557-201ENST00000563184 FAM90A13PP0C7W8 464 aa5.74□□□□□ -1.49
LINC00557-201ENST00000563184 FAM90A24PP0C7X0 464 aa5.74□□□□□ -1.49
LINC00557-201ENST00000563184 CDK4P11802 303 aa5.74□□□□□ -1.49
LINC00557-201ENST00000563184 IL7RP16871 459 aa5.74□□□□□ -1.49
LINC00557-201ENST00000563184 ABATP80404 500 aa5.74□□□□□ -1.49
LINC00557-201ENST00000563184 NIPAL4Q0D2K0 466 aa5.74□□□□□ -1.49
LINC00557-201ENST00000563184 ITGADQ13349 1161 aa5.74□□□□□ -1.49
LINC00557-201ENST00000563184 DRAP1Q14919 205 aaPredicted RBP5.74□□□□□ -1.49
LINC00557-201ENST00000563184 DNTTIP2Q5QJE6 756 aaKnown RBP5.74□□□□□ -1.49
LINC00557-201ENST00000563184 FNBP1LQ5T0N5 605 aa5.74□□□□□ -1.49
LINC00557-201ENST00000563184 OTUD1Q5VV17 481 aaPredicted RBP5.74□□□□□ -1.49
LINC00557-201ENST00000563184 CCDC129Q6ZRS4 1044 aa5.74□□□□□ -1.49
LINC00557-201ENST00000563184 FASTKD5Q7L8L6 764 aaKnown RBP5.74□□□□□ -1.49
LINC00557-201ENST00000563184 LINGO2Q7L985 606 aa5.74□□□□□ -1.49
LINC00557-201ENST00000563184 TTC39CQ8N584 583 aa5.74□□□□□ -1.49
LINC00557-201ENST00000563184 ASB5Q8WWX0 329 aa5.74□□□□□ -1.49
LINC00557-201ENST00000563184 TRIB2Q92519 343 aa5.74□□□□□ -1.49
LINC00557-201ENST00000563184 SMG7Q92540 1137 aaKnown RBP5.74□□□□□ -1.49
LINC00557-201ENST00000563184 OTULINQ96BN8 352 aa5.74□□□□□ -1.49
LINC00557-201ENST00000563184 MKKSQ9NPJ1 570 aaPredicted RBP5.74□□□□□ -1.49
LINC00557-201ENST00000563184 OR6C3Q9NZP0 311 aa5.74□□□□□ -1.49
LINC00557-201ENST00000563184 DLGAP2Q9P1A6 1054 aa5.74□□□□□ -1.49
LINC00557-201ENST00000563184 TBC1D29Q9UFV1 150 aa5.74□□□□□ -1.49
LINC00557-201ENST00000563184 LAS1LQ9Y4W2 734 aaKnown RBP5.74□□□□□ -1.49
LINC00557-201ENST00000563184 TNFRSF18Q9Y5U5 241 aa5.74□□□□□ -1.49
LINC00557-201ENST00000563184 PTGDR2Q9Y5Y4 395 aa5.74□□□□□ -1.49
LINC00557-201ENST00000563184 LYVE1Q9Y5Y7 322 aa5.74□□□□□ -1.49
LINC00557-201ENST00000563184 CEPT1Q9Y6K0 416 aa5.74□□□□□ -1.49
LINC00557-201ENST00000563184 SQORQ9Y6N5 450 aa5.74□□□□□ -1.49
LINC00557-201ENST00000563184 EVPLQ92817 2033 aa5.74□□□□□ -1.49
LINC00557-201ENST00000563184 FRMD3A2A2Y4 597 aa5.73□□□□□ -1.49
LINC00557-201ENST00000563184 INO80B-WBP1J3KQ70 363 aa5.73□□□□□ -1.49
LINC00557-201ENST00000563184 GTPBP1O00178 669 aaKnown RBP5.73□□□□□ -1.49
LINC00557-201ENST00000563184 VWA5AO00534 786 aa5.73□□□□□ -1.49
LINC00557-201ENST00000563184 ITM2AO43736 263 aa5.73□□□□□ -1.49
LINC00557-201ENST00000563184 NKX2-2O95096 273 aa5.73□□□□□ -1.49
LINC00557-201ENST00000563184 NDUFB4O95168 129 aa5.73□□□□□ -1.49
LINC00557-201ENST00000563184 OR2C1O95371 312 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms