RNA–Protein interactions for RNA: ENST00000562039.1

NSMCE1-203, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 260 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-203ENST00000562039 BRAT1Q6PJG6 821 aa9.52□□□□□ -0.89
NSMCE1-203ENST00000562039 C19orf48Q6RUI8 117 aa9.52□□□□□ -0.89
NSMCE1-203ENST00000562039 LIPIQ6XZB0 460 aa9.52□□□□□ -0.89
NSMCE1-203ENST00000562039 TSPAN33Q86UF1 283 aa9.52□□□□□ -0.89
NSMCE1-203ENST00000562039 GAS2L3Q86XJ1 694 aa9.52□□□□□ -0.89
NSMCE1-203ENST00000562039 RFX6Q8HWS3 928 aa9.52□□□□□ -0.89
NSMCE1-203ENST00000562039 TC2NQ8N9U0 490 aa9.52□□□□□ -0.89
NSMCE1-203ENST00000562039 CCNYQ8ND76 341 aa9.52□□□□□ -0.89
NSMCE1-203ENST00000562039 DENND6BQ8NEG7 585 aa9.52□□□□□ -0.89
NSMCE1-203ENST00000562039 OR4C6Q8NH72 309 aa9.52□□□□□ -0.89
NSMCE1-203ENST00000562039 NUDCD1Q96RS6 583 aa9.52□□□□□ -0.89
NSMCE1-203ENST00000562039 APOOQ9BUR5 198 aa9.52□□□□□ -0.89
NSMCE1-203ENST00000562039 C1QTNF7Q9BXJ2 289 aa9.52□□□□□ -0.89
NSMCE1-203ENST00000562039 CLPBQ9H078 707 aa9.52□□□□□ -0.89
NSMCE1-203ENST00000562039 MRPL40Q9NQ50 206 aaKnown RBP9.52□□□□□ -0.89
NSMCE1-203ENST00000562039 GPR27Q9NS67 375 aa9.52□□□□□ -0.89
NSMCE1-203ENST00000562039 RBM22Q9NW64 420 aaKnown RBP eCLIP9.52□□□□□ -0.89
NSMCE1-203ENST00000562039 SEPT10Q9P0V9 454 aa9.52□□□□□ -0.89
NSMCE1-203ENST00000562039 GULP1Q9UBP9 304 aa9.52□□□□□ -0.89
NSMCE1-203ENST00000562039 APOBEC3BQ9UH17 382 aaKnown RBP9.52□□□□□ -0.89
NSMCE1-203ENST00000562039 CD84Q9UIB8 345 aa9.52□□□□□ -0.89
NSMCE1-203ENST00000562039 HEY1Q9Y5J3 304 aa9.52□□□□□ -0.89
NSMCE1-203ENST00000562039 ASXL3Q9C0F0 2248 aa9.51□□□□□ -0.89
NSMCE1-203ENST00000562039 ASPMQ8IZT6 3477 aa9.51□□□□□ -0.89
NSMCE1-203ENST00000562039 LY6G6EA0A0G2JKS1 128 aa9.51□□□□□ -0.89
NSMCE1-203ENST00000562039 TMEM202A6NGA9 273 aa9.51□□□□□ -0.89
NSMCE1-203ENST00000562039 SRRM3A6NNA2 597 aaPredicted RBP9.51□□□□□ -0.89
NSMCE1-203ENST00000562039 F5H423 210 aaPredicted RBP9.51□□□□□ -0.89
NSMCE1-203ENST00000562039 KCNK1O00180 336 aa9.51□□□□□ -0.89
NSMCE1-203ENST00000562039 AQP9O43315 295 aa9.51□□□□□ -0.89
NSMCE1-203ENST00000562039 HLA-DQB2P05538 268 aa9.51□□□□□ -0.89
NSMCE1-203ENST00000562039 PDHA1P08559 390 aa9.51□□□□□ -0.89
NSMCE1-203ENST00000562039 KRT7P08729 469 aa9.51□□□□□ -0.89
NSMCE1-203ENST00000562039 ALPPL2P10696 532 aa9.51□□□□□ -0.89
NSMCE1-203ENST00000562039 TSHRP16473 764 aa9.51□□□□□ -0.89
NSMCE1-203ENST00000562039 GM2AP17900 193 aa9.51□□□□□ -0.89
NSMCE1-203ENST00000562039 CR2P20023 1033 aa9.51□□□□□ -0.89
NSMCE1-203ENST00000562039 GARSP41250 739 aaKnown RBP9.51□□□□□ -0.89
NSMCE1-203ENST00000562039 MAGEA1P43355 309 aa9.51□□□□□ -0.89
NSMCE1-203ENST00000562039 ZNF75DP51815 510 aa9.51□□□□□ -0.89
NSMCE1-203ENST00000562039 PPARDQ03181 441 aa9.51□□□□□ -0.89
NSMCE1-203ENST00000562039 NSUN2Q08J23 767 aaKnown RBP eCLIP9.51□□□□□ -0.89
NSMCE1-203ENST00000562039 NIPAL4Q0D2K0 466 aa9.51□□□□□ -0.89
NSMCE1-203ENST00000562039 GALNT2Q10471 571 aa9.51□□□□□ -0.89
NSMCE1-203ENST00000562039 GRM3Q14832 879 aa9.51□□□□□ -0.89
NSMCE1-203ENST00000562039 PDK2Q15119 407 aa9.51□□□□□ -0.89
NSMCE1-203ENST00000562039 SMAD1Q15797 465 aaKnown RBP9.51□□□□□ -0.89
NSMCE1-203ENST00000562039 CNGA3Q16281 694 aa9.51□□□□□ -0.89
NSMCE1-203ENST00000562039 ALG11Q2TAA5 492 aa9.51□□□□□ -0.89
NSMCE1-203ENST00000562039 KAZNQ674X7 775 aa9.51□□□□□ -0.89
NSMCE1-203ENST00000562039 GUSBP11Q6P575 273 aa9.51□□□□□ -0.89
NSMCE1-203ENST00000562039 DPPA4Q7L190 304 aa9.51□□□□□ -0.89
NSMCE1-203ENST00000562039 EFL1Q7Z2Z2 1120 aaKnown RBP9.51□□□□□ -0.89
NSMCE1-203ENST00000562039 KDELC2Q7Z4H8 507 aa9.51□□□□□ -0.89
NSMCE1-203ENST00000562039 HSD11B1LQ7Z5J1 315 aa9.51□□□□□ -0.89
NSMCE1-203ENST00000562039 DCP2Q8IU60 420 aaKnown RBP9.51□□□□□ -0.89
NSMCE1-203ENST00000562039 CNGA4Q8IV77 575 aa9.51□□□□□ -0.89
NSMCE1-203ENST00000562039 SFTPA2Q8IWL1 248 aa9.51□□□□□ -0.89
NSMCE1-203ENST00000562039 BBS5Q8N3I7 341 aa9.51□□□□□ -0.89
NSMCE1-203ENST00000562039 GALNT15Q8N3T1 639 aa9.51□□□□□ -0.89
NSMCE1-203ENST00000562039 KDF1Q8NAX2 398 aaPredicted RBP9.51□□□□□ -0.89
NSMCE1-203ENST00000562039 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.51□□□□□ -0.89
NSMCE1-203ENST00000562039 ASB12Q8WXK4 309 aa9.51□□□□□ -0.89
NSMCE1-203ENST00000562039 ECHDC3Q96DC8 303 aa9.51□□□□□ -0.89
NSMCE1-203ENST00000562039 PDXPQ96GD0 296 aa9.51□□□□□ -0.89
NSMCE1-203ENST00000562039 ZNF599Q96NL3 588 aa9.51□□□□□ -0.89
NSMCE1-203ENST00000562039 LGMNQ99538 433 aa9.51□□□□□ -0.89
NSMCE1-203ENST00000562039 IL12RB2Q99665 862 aa9.51□□□□□ -0.89
NSMCE1-203ENST00000562039 MGME1Q9BQP7 344 aa9.51□□□□□ -0.89
NSMCE1-203ENST00000562039 ZNF670Q9BS34 389 aa9.51□□□□□ -0.89
NSMCE1-203ENST00000562039 LRRC61Q9BV99 259 aa9.51□□□□□ -0.89
NSMCE1-203ENST00000562039 LGR4Q9BXB1 951 aa9.51□□□□□ -0.89
NSMCE1-203ENST00000562039 CCDC86Q9H6F5 360 aaKnown RBP9.51□□□□□ -0.89
NSMCE1-203ENST00000562039 SPASTQ9UBP0 616 aa9.51□□□□□ -0.89
NSMCE1-203ENST00000562039 DOLKQ9UPQ8 538 aa9.51□□□□□ -0.89
NSMCE1-203ENST00000562039 CHKBQ9Y259 395 aa9.51□□□□□ -0.89
NSMCE1-203ENST00000562039 RAXQ9Y2V3 346 aa9.51□□□□□ -0.89
NSMCE1-203ENST00000562039 RAI2Q9Y5P3 530 aa9.51□□□□□ -0.89
NSMCE1-203ENST00000562039 U3KQA8 63 aa9.51□□□□□ -0.89
NSMCE1-203ENST00000562039 APC2O95996 2303 aa9.51□□□□□ -0.89
NSMCE1-203ENST00000562039 MYLKQ15746 1914 aa9.5□□□□□ -0.89
NSMCE1-203ENST00000562039 COL5A1P20908 1838 aaPredicted RBP9.5□□□□□ -0.89
NSMCE1-203ENST00000562039 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.5□□□□□ -0.89
NSMCE1-203ENST00000562039 FAM221BA6H8Z2 402 aa9.5□□□□□ -0.89
NSMCE1-203ENST00000562039 NPIPB15A6NHN6 443 aaPredicted RBP9.5□□□□□ -0.89
NSMCE1-203ENST00000562039 SOWAHDA6NJG2 315 aa9.5□□□□□ -0.89
NSMCE1-203ENST00000562039 YY2O15391 372 aa9.5□□□□□ -0.89
NSMCE1-203ENST00000562039 SPOPO43791 374 aa9.5□□□□□ -0.89
NSMCE1-203ENST00000562039 RASGRP1O95267 797 aa9.5□□□□□ -0.89
NSMCE1-203ENST00000562039 PGLSO95336 258 aa9.5□□□□□ -0.89
NSMCE1-203ENST00000562039 JCHAINP01591 159 aa9.5□□□□□ -0.89
NSMCE1-203ENST00000562039 ANXA6P08133 673 aa9.5□□□□□ -0.89
NSMCE1-203ENST00000562039 KRT10P13645 584 aa9.5□□□□□ -0.89
NSMCE1-203ENST00000562039 CTSEP14091 401 aa9.5□□□□□ -0.89
NSMCE1-203ENST00000562039 COMTP21964 271 aa9.5□□□□□ -0.89
NSMCE1-203ENST00000562039 LHCGRP22888 699 aa9.5□□□□□ -0.89
NSMCE1-203ENST00000562039 VIPR1P32241 457 aa9.5□□□□□ -0.89
NSMCE1-203ENST00000562039 ETV3P41162 512 aa9.5□□□□□ -0.89
NSMCE1-203ENST00000562039 POLR2LP62875 67 aaKnown RBP9.5□□□□□ -0.89
NSMCE1-203ENST00000562039 INSM1Q01101 510 aaPredicted RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms