RNA–Protein interactions for RNA: ENST00000561707.1

COTL1-202, Transcript of coactosin like F-actin binding protein 1, humanhuman

TSL 1 (best)

Gene COTL1, Length 781 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COTL1-202ENST00000561707 ZIM3Q96PE6 472 aa12.89□□□□□ -0.35
COTL1-202ENST00000561707 RANBP9Q96S59 729 aa12.89□□□□□ -0.35
COTL1-202ENST00000561707 ARHGEF3Q9NR81 526 aa12.89□□□□□ -0.35
COTL1-202ENST00000561707 MUTYHQ9UIF7 546 aa12.89□□□□□ -0.35
COTL1-202ENST00000561707 RABGEF1Q9UJ41 708 aa12.89□□□□□ -0.35
COTL1-202ENST00000561707 RPL26L1Q9UNX3 145 aaKnown RBP12.89□□□□□ -0.35
COTL1-202ENST00000561707 PLAAQ9Y263 795 aa12.89□□□□□ -0.35
COTL1-202ENST00000561707 ARL5AQ9Y689 179 aa12.89□□□□□ -0.35
COTL1-202ENST00000561707 NFS1Q9Y697 457 aa12.89□□□□□ -0.35
COTL1-202ENST00000561707 RPS6KL1Q9Y6S9 549 aa12.89□□□□□ -0.35
COTL1-202ENST00000561707 A0A0J9YYE9 177 aa12.88□□□□□ -0.35
COTL1-202ENST00000561707 FAM237BA0A1B0GVD1 139 aa12.88□□□□□ -0.35
COTL1-202ENST00000561707 A0A1W2PQF6 199 aa12.88□□□□□ -0.35
COTL1-202ENST00000561707 MROH6A6NGR9 719 aa12.88□□□□□ -0.35
COTL1-202ENST00000561707 GOLGA8CPA6NN73 597 aa12.88□□□□□ -0.35
COTL1-202ENST00000561707 CXorf49A8MYA2 514 aaPredicted RBP12.88□□□□□ -0.35
COTL1-202ENST00000561707 MAP2K7O14733 419 aa12.88□□□□□ -0.35
COTL1-202ENST00000561707 NPC1O15118 1278 aa12.88□□□□□ -0.35
COTL1-202ENST00000561707 SYNCRIPO60506 623 aaKnown RBP12.88□□□□□ -0.35
COTL1-202ENST00000561707 IL1BP01584 269 aa12.88□□□□□ -0.35
COTL1-202ENST00000561707 TRBC1P01850 177 aa12.88□□□□□ -0.35
COTL1-202ENST00000561707 PRNPP04156 253 aa12.88□□□□□ -0.35
COTL1-202ENST00000561707 PGAM1P18669 254 aa12.88□□□□□ -0.35
COTL1-202ENST00000561707 STARD6P59095 220 aa12.88□□□□□ -0.35
COTL1-202ENST00000561707 FAM193AP78312 1265 aa12.88□□□□□ -0.35
COTL1-202ENST00000561707 FZD5Q13467 585 aa12.88□□□□□ -0.35
COTL1-202ENST00000561707 ELAVL3Q14576 367 aaKnown RBP12.88□□□□□ -0.35
COTL1-202ENST00000561707 EFTUD2Q15029 972 aaKnown RBP eCLIP12.88□□□□□ -0.35
COTL1-202ENST00000561707 E2F5Q15329 346 aa12.88□□□□□ -0.35
COTL1-202ENST00000561707 CDKN3Q16667 212 aa12.88□□□□□ -0.35
COTL1-202ENST00000561707 TMEM92Q6UXU6 159 aa12.88□□□□□ -0.35
COTL1-202ENST00000561707 PARS2Q7L3T8 475 aaKnown RBP12.88□□□□□ -0.35
COTL1-202ENST00000561707 LYSMD3Q7Z3D4 306 aa12.88□□□□□ -0.35
COTL1-202ENST00000561707 TTC7BQ86TV6 843 aa12.88□□□□□ -0.35
COTL1-202ENST00000561707 TMEM135Q86UB9 458 aa12.88□□□□□ -0.35
COTL1-202ENST00000561707 TSPAN33Q86UF1 283 aa12.88□□□□□ -0.35
COTL1-202ENST00000561707 GJD3Q8N144 294 aa12.88□□□□□ -0.35
COTL1-202ENST00000561707 SIX5Q8N196 739 aa12.88□□□□□ -0.35
COTL1-202ENST00000561707 EID2BQ96D98 161 aa12.88□□□□□ -0.35
COTL1-202ENST00000561707 LRIG1Q96JA1 1093 aa12.88□□□□□ -0.35
COTL1-202ENST00000561707 GABRG3Q99928 467 aa12.88□□□□□ -0.35
COTL1-202ENST00000561707 OSBPL1AQ9BXW6 950 aa12.88□□□□□ -0.35
COTL1-202ENST00000561707 FOXQ1Q9C009 403 aa12.88□□□□□ -0.35
COTL1-202ENST00000561707 SLC6A17Q9H1V8 727 aa12.88□□□□□ -0.35
COTL1-202ENST00000561707 MAGEE1Q9HCI5 957 aa12.88□□□□□ -0.35
COTL1-202ENST00000561707 SMYD2Q9NRG4 433 aa12.88□□□□□ -0.35
COTL1-202ENST00000561707 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.88□□□□□ -0.35
COTL1-202ENST00000561707 IL1RAPL1Q9NZN1 696 aa12.88□□□□□ -0.35
COTL1-202ENST00000561707 DKK3Q9UBP4 350 aa12.88□□□□□ -0.35
COTL1-202ENST00000561707 PPIL1Q9Y3C6 166 aa12.88□□□□□ -0.35
COTL1-202ENST00000561707 FAM169AQ9Y6X4 670 aa12.88□□□□□ -0.35
COTL1-202ENST00000561707 A0A087WUV0 522 aaPredicted RBP12.87□□□□□ -0.35
COTL1-202ENST00000561707 ZCWPW2A0A1B0GU75 182 aa12.87□□□□□ -0.35
COTL1-202ENST00000561707 TSPAN11A1L157 253 aa12.87□□□□□ -0.35
COTL1-202ENST00000561707 HEATR9A2RTY3 570 aa12.87□□□□□ -0.35
COTL1-202ENST00000561707 NPIPB15A6NHN6 443 aaPredicted RBP12.87□□□□□ -0.35
COTL1-202ENST00000561707 FAM170BA6NMN3 283 aa12.87□□□□□ -0.35
COTL1-202ENST00000561707 MID1O15344 667 aa12.87□□□□□ -0.35
COTL1-202ENST00000561707 CLDN7O95471 211 aa12.87□□□□□ -0.35
COTL1-202ENST00000561707 SLC4A1P02730 911 aa12.87□□□□□ -0.35
COTL1-202ENST00000561707 C1QAP02745 245 aa12.87□□□□□ -0.35
COTL1-202ENST00000561707 ERVK-10P10266 1014 aa12.87□□□□□ -0.35
COTL1-202ENST00000561707 HOXB2P14652 356 aa12.87□□□□□ -0.35
COTL1-202ENST00000561707 TSHRP16473 764 aa12.87□□□□□ -0.35
COTL1-202ENST00000561707 GRIA4P48058 902 aa12.87□□□□□ -0.35
COTL1-202ENST00000561707 ARSDP51689 593 aa12.87□□□□□ -0.35
COTL1-202ENST00000561707 RPS14P62263 151 aaKnown RBP12.87□□□□□ -0.35
COTL1-202ENST00000561707 SATB1Q01826 763 aa12.87□□□□□ -0.35
COTL1-202ENST00000561707 CRYMQ14894 314 aa12.87□□□□□ -0.35
COTL1-202ENST00000561707 UBXN2BQ14CS0 331 aa12.87□□□□□ -0.35
COTL1-202ENST00000561707 TAF1AQ15573 450 aaPredicted RBP12.87□□□□□ -0.35
COTL1-202ENST00000561707 CNGA3Q16281 694 aa12.87□□□□□ -0.35
COTL1-202ENST00000561707 UGP2Q16851 508 aa12.87□□□□□ -0.35
COTL1-202ENST00000561707 FBXO43Q4G163 708 aa12.87□□□□□ -0.35
COTL1-202ENST00000561707 SPANXN3Q5MJ09 141 aa12.87□□□□□ -0.35
COTL1-202ENST00000561707 SPDYCQ5MJ68 293 aa12.87□□□□□ -0.35
COTL1-202ENST00000561707 CRTC1Q6UUV9 634 aa12.87□□□□□ -0.35
COTL1-202ENST00000561707 Q6ZS52 159 aa12.87□□□□□ -0.35
COTL1-202ENST00000561707 RFLNAQ6ZTI6 216 aa12.87□□□□□ -0.35
COTL1-202ENST00000561707 CACUL1Q86Y37 369 aa12.87□□□□□ -0.35
COTL1-202ENST00000561707 CCNJLQ8IV13 435 aa12.87□□□□□ -0.35
COTL1-202ENST00000561707 OR4K2Q8NGD2 314 aa12.87□□□□□ -0.35
COTL1-202ENST00000561707 OR13C4Q8NGS5 318 aa12.87□□□□□ -0.35
COTL1-202ENST00000561707 OR2T3Q8NH03 318 aa12.87□□□□□ -0.35
COTL1-202ENST00000561707 GSDMBQ8TAX9 411 aa12.87□□□□□ -0.35
COTL1-202ENST00000561707 MRRFQ96E11 262 aaKnown RBP12.87□□□□□ -0.35
COTL1-202ENST00000561707 SCRN2Q96FV2 425 aa12.87□□□□□ -0.35
COTL1-202ENST00000561707 NAT9Q9BTE0 207 aa12.87□□□□□ -0.35
COTL1-202ENST00000561707 GPR63Q9BZJ6 419 aa12.87□□□□□ -0.35
COTL1-202ENST00000561707 RSPH9Q9H1X1 276 aaPredicted RBP12.87□□□□□ -0.35
COTL1-202ENST00000561707 MRM3Q9HC36 420 aaKnown RBP12.87□□□□□ -0.35
COTL1-202ENST00000561707 BPIFA1Q9NP55 256 aa12.87□□□□□ -0.35
COTL1-202ENST00000561707 LTB4R2Q9NPC1 389 aa12.87□□□□□ -0.35
COTL1-202ENST00000561707 PCDH12Q9NPG4 1184 aa12.87□□□□□ -0.35
COTL1-202ENST00000561707 TREX1Q9NSU2 369 aa12.87□□□□□ -0.35
COTL1-202ENST00000561707 ZNF711Q9Y462 761 aa12.87□□□□□ -0.35
COTL1-202ENST00000561707 LRRK1Q38SD2 2015 aa12.87□□□□□ -0.35
COTL1-202ENST00000561707 DOCK9Q9BZ29 2069 aa12.86□□□□□ -0.35
COTL1-202ENST00000561707 TCRBV9S1A1TA0A576 114 aa12.86□□□□□ -0.35
COTL1-202ENST00000561707 KANSL1LA0AUZ9 987 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms