RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-222ENST00000561431 TMEM88Q6PEY1 159 aa4.31□□□□□ -1.72
LRRC28-222ENST00000561431 DHRS13Q6UX07 377 aa4.31□□□□□ -1.72
LRRC28-222ENST00000561431 ATF7IPQ6VMQ6 1270 aa4.31□□□□□ -1.72
LRRC28-222ENST00000561431 SLC39A5Q6ZMH5 540 aa4.31□□□□□ -1.72
LRRC28-222ENST00000561431 ENOSF1Q7L5Y1 443 aa4.31□□□□□ -1.72
LRRC28-222ENST00000561431 ATG9AQ7Z3C6 839 aa4.31□□□□□ -1.72
LRRC28-222ENST00000561431 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.31□□□□□ -1.72
LRRC28-222ENST00000561431 GLCCI1Q86VQ1 547 aa4.31□□□□□ -1.72
LRRC28-222ENST00000561431 VSIG1Q86XK7 387 aa4.31□□□□□ -1.72
LRRC28-222ENST00000561431 UEVLDQ8IX04 471 aa4.31□□□□□ -1.72
LRRC28-222ENST00000561431 RNF168Q8IYW5 571 aaPredicted RBP4.31□□□□□ -1.72
LRRC28-222ENST00000561431 BOLLQ8N9W6 283 aaKnown RBP4.31□□□□□ -1.72
LRRC28-222ENST00000561431 GABPB2Q8TAK5 448 aaPredicted RBP4.31□□□□□ -1.72
LRRC28-222ENST00000561431 BRSK1Q8TDC3 778 aa4.31□□□□□ -1.72
LRRC28-222ENST00000561431 CLEC4CQ8WTT0 213 aa4.31□□□□□ -1.72
LRRC28-222ENST00000561431 ZNF606Q8WXB4 792 aa4.31□□□□□ -1.72
LRRC28-222ENST00000561431 ARRDC3Q96B67 414 aa4.31□□□□□ -1.72
LRRC28-222ENST00000561431 TRMT61AQ96FX7 289 aaKnown RBP4.31□□□□□ -1.72
LRRC28-222ENST00000561431 RBM18Q96H35 190 aaKnown RBP4.31□□□□□ -1.72
LRRC28-222ENST00000561431 ZBED3Q96IU2 234 aaPredicted RBP4.31□□□□□ -1.72
LRRC28-222ENST00000561431 RADILQ96JH8 1075 aa4.31□□□□□ -1.72
LRRC28-222ENST00000561431 MAELQ96JY0 434 aaKnown RBP4.31□□□□□ -1.72
LRRC28-222ENST00000561431 GPR78Q96P69 363 aa4.31□□□□□ -1.72
LRRC28-222ENST00000561431 GSDMAQ96QA5 445 aa4.31□□□□□ -1.72
LRRC28-222ENST00000561431 CLPBQ9H078 707 aa4.31□□□□□ -1.72
LRRC28-222ENST00000561431 SFXN1Q9H9B4 322 aa4.31□□□□□ -1.72
LRRC28-222ENST00000561431 PLEKHA2Q9HB19 425 aa4.31□□□□□ -1.72
LRRC28-222ENST00000561431 CD209Q9NNX6 404 aa4.31□□□□□ -1.72
LRRC28-222ENST00000561431 MYOZ2Q9NPC6 264 aa4.31□□□□□ -1.72
LRRC28-222ENST00000561431 ASIC5Q9NY37 505 aa4.31□□□□□ -1.72
LRRC28-222ENST00000561431 B3GNT3Q9Y2A9 372 aa4.31□□□□□ -1.72
LRRC28-222ENST00000561431 PAPPA2Q9BXP8 1791 aa4.31□□□□□ -1.72
LRRC28-222ENST00000561431 SSC5DA1L4H1 1573 aa4.31□□□□□ -1.72
LRRC28-222ENST00000561431 ECM29Q5VYK3 1845 aa4.3□□□□□ -1.72
LRRC28-222ENST00000561431 AOX1Q06278 1338 aa4.3□□□□□ -1.72
LRRC28-222ENST00000561431 FAM205AQ6ZU69 1335 aa4.3□□□□□ -1.72
LRRC28-222ENST00000561431 A0A087X0M5 115 aa4.3□□□□□ -1.72
LRRC28-222ENST00000561431 A0A1B0GX30 115 aa4.3□□□□□ -1.72
LRRC28-222ENST00000561431 KRTAP29-1A8MX34 341 aaPredicted RBP4.3□□□□□ -1.72
LRRC28-222ENST00000561431 PI4K2BG5E9Z4 385 aa4.3□□□□□ -1.72
LRRC28-222ENST00000561431 KIAA0754O94854 1291 aa4.3□□□□□ -1.72
LRRC28-222ENST00000561431 MBPP02686 304 aaPredicted RBP4.3□□□□□ -1.72
LRRC28-222ENST00000561431 CHRM5P08912 532 aaPredicted RBP4.3□□□□□ -1.72
LRRC28-222ENST00000561431 UBTFL1P0CB47 393 aaPredicted RBP4.3□□□□□ -1.72
LRRC28-222ENST00000561431 CKMT1AP12532 417 aa4.3□□□□□ -1.72
LRRC28-222ENST00000561431 KRT10P13645 584 aa4.3□□□□□ -1.72
LRRC28-222ENST00000561431 AKR1B1P15121 316 aa4.3□□□□□ -1.72
LRRC28-222ENST00000561431 PROZP22891 400 aa4.3□□□□□ -1.72
LRRC28-222ENST00000561431 TACR3P29371 465 aa4.3□□□□□ -1.72
LRRC28-222ENST00000561431 STAT6P42226 847 aa4.3□□□□□ -1.72
LRRC28-222ENST00000561431 GYG1P46976 350 aa4.3□□□□□ -1.72
LRRC28-222ENST00000561431 KCNJ4P48050 445 aa4.3□□□□□ -1.72
LRRC28-222ENST00000561431 ELLP55199 621 aaPredicted RBP4.3□□□□□ -1.72
LRRC28-222ENST00000561431 SLC20A2Q08357 652 aa4.3□□□□□ -1.72
LRRC28-222ENST00000561431 DMTNQ08495 405 aa4.3□□□□□ -1.72
LRRC28-222ENST00000561431 GAB1Q13480 694 aa4.3□□□□□ -1.72
LRRC28-222ENST00000561431 TRPC3Q13507 836 aa4.3□□□□□ -1.72
LRRC28-222ENST00000561431 ALKBH1Q13686 389 aaKnown RBP4.3□□□□□ -1.72
LRRC28-222ENST00000561431 ANXA2RQ3ZCQ2 193 aa4.3□□□□□ -1.72
LRRC28-222ENST00000561431 ZNF484Q5JVG2 852 aa4.3□□□□□ -1.72
LRRC28-222ENST00000561431 CFAP58Q5T655 872 aa4.3□□□□□ -1.72
LRRC28-222ENST00000561431 FAM205BPQ63HN1 556 aa4.3□□□□□ -1.72
LRRC28-222ENST00000561431 FCRLBQ6BAA4 426 aa4.3□□□□□ -1.72
LRRC28-222ENST00000561431 CNSTQ6PJW8 725 aa4.3□□□□□ -1.72
LRRC28-222ENST00000561431 BTN2A1Q7KYR7 527 aa4.3□□□□□ -1.72
LRRC28-222ENST00000561431 KDELC2Q7Z4H8 507 aa4.3□□□□□ -1.72
LRRC28-222ENST00000561431 LRRTM4Q86VH4 590 aa4.3□□□□□ -1.72
LRRC28-222ENST00000561431 CHSY1Q86X52 802 aa4.3□□□□□ -1.72
LRRC28-222ENST00000561431 IQCA1Q86XH1 822 aa4.3□□□□□ -1.72
LRRC28-222ENST00000561431 EPHX4Q8IUS5 362 aa4.3□□□□□ -1.72
LRRC28-222ENST00000561431 HERC6Q8IVU3 1022 aa4.3□□□□□ -1.72
LRRC28-222ENST00000561431 LINC01465Q8N7H1 131 aa4.3□□□□□ -1.72
LRRC28-222ENST00000561431 ZMIZ2Q8NF64 920 aa4.3□□□□□ -1.72
LRRC28-222ENST00000561431 TDRD7Q8NHU6 1098 aaKnown RBP4.3□□□□□ -1.72
LRRC28-222ENST00000561431 MGARPQ8TDB4 240 aa4.3□□□□□ -1.72
LRRC28-222ENST00000561431 PIGKQ92643 395 aa4.3□□□□□ -1.72
LRRC28-222ENST00000561431 FAM84BQ96KN1 310 aaPredicted RBP4.3□□□□□ -1.72
LRRC28-222ENST00000561431 TRIM31Q9BZY9 425 aa4.3□□□□□ -1.72
LRRC28-222ENST00000561431 TWSG1Q9GZX9 223 aa4.3□□□□□ -1.72
LRRC28-222ENST00000561431 RPAP3Q9H6T3 665 aaPredicted RBP4.3□□□□□ -1.72
LRRC28-222ENST00000561431 UBN1Q9NPG3 1134 aa4.3□□□□□ -1.72
LRRC28-222ENST00000561431 WASH6PQ9NQA3 447 aa4.3□□□□□ -1.72
LRRC28-222ENST00000561431 GGA3Q9NZ52 723 aa4.3□□□□□ -1.72
LRRC28-222ENST00000561431 IFT80Q9P2H3 777 aaPredicted RBP4.3□□□□□ -1.72
LRRC28-222ENST00000561431 IPO11Q9UI26 975 aaKnown RBP4.3□□□□□ -1.72
LRRC28-222ENST00000561431 SLC13A4Q9UKG4 626 aa4.3□□□□□ -1.72
LRRC28-222ENST00000561431 SLC8A2Q9UPR5 921 aa4.3□□□□□ -1.72
LRRC28-222ENST00000561431 PCDHAC2Q9Y5I4 1007 aa4.3□□□□□ -1.72
LRRC28-222ENST00000561431 COPG1Q9Y678 874 aaKnown RBP4.3□□□□□ -1.72
LRRC28-222ENST00000561431 SIRT4Q9Y6E7 314 aaPredicted RBP4.3□□□□□ -1.72
LRRC28-222ENST00000561431 C17orf113A0A1B0GUU1 675 aa4.29□□□□□ -1.72
LRRC28-222ENST00000561431 TCRBV5S1A1TA0A578 114 aa4.29□□□□□ -1.72
LRRC28-222ENST00000561431 B4DLN1 442 aa4.29□□□□□ -1.72
LRRC28-222ENST00000561431 H3BNC9 293 aa4.29□□□□□ -1.72
LRRC28-222ENST00000561431 NDC80O14777 642 aa4.29□□□□□ -1.72
LRRC28-222ENST00000561431 SYN3O14994 580 aa4.29□□□□□ -1.72
LRRC28-222ENST00000561431 TSPAN3O60637 253 aa4.29□□□□□ -1.72
LRRC28-222ENST00000561431 ZBED4O75132 1171 aa4.29□□□□□ -1.72
LRRC28-222ENST00000561431 CIAO1O76071 339 aa4.29□□□□□ -1.72
LRRC28-222ENST00000561431 CELF2O95319 508 aaKnown RBP4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms