RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, human

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPM1-231	ENST00000561395	MRRF	Q96E11	262 aa	Known RBP	7.59	□□□□□ -1.19
TPM1-231	ENST00000561395	ALG14	Q96F25	216 aa		7.59	□□□□□ -1.19
TPM1-231	ENST00000561395	PSKH2	Q96QS6	385 aa		7.59	□□□□□ -1.19
TPM1-231	ENST00000561395	SEMA3C	Q99985	751 aa		7.59	□□□□□ -1.19
TPM1-231	ENST00000561395	FEM1A	Q9BSK4	669 aa		7.59	□□□□□ -1.19
TPM1-231	ENST00000561395	IER2	Q9BTL4	223 aa		7.59	□□□□□ -1.19
TPM1-231	ENST00000561395	KIFC1	Q9BW19	673 aa		7.59	□□□□□ -1.19
TPM1-231	ENST00000561395	CINP	Q9BW66	212 aa	Predicted RBP	7.59	□□□□□ -1.19
TPM1-231	ENST00000561395	ARNT2	Q9HBZ2	717 aa		7.59	□□□□□ -1.19
TPM1-231	ENST00000561395	MRM3	Q9HC36	420 aa	Known RBP	7.59	□□□□□ -1.19
TPM1-231	ENST00000561395	SMYD2	Q9NRG4	433 aa		7.59	□□□□□ -1.19
TPM1-231	ENST00000561395	MOCS1	Q9NZB8	636 aa		7.59	□□□□□ -1.19
TPM1-231	ENST00000561395	SENP1	Q9P0U3	644 aa		7.59	□□□□□ -1.19
TPM1-231	ENST00000561395	ZNF180	Q9UJW8	692 aa		7.59	□□□□□ -1.19
TPM1-231	ENST00000561395	VPS28	Q9UK41	221 aa		7.59	□□□□□ -1.19
TPM1-231	ENST00000561395	NDRG2	Q9UN36	371 aa	Known RBP	7.59	□□□□□ -1.19
TPM1-231	ENST00000561395	SOX13	Q9UN79	622 aa		7.59	□□□□□ -1.19
TPM1-231	ENST00000561395	MRPS23	Q9Y3D9	190 aa	Known RBP	7.59	□□□□□ -1.19
TPM1-231	ENST00000561395	ACTL7A	Q9Y615	435 aa		7.59	□□□□□ -1.19
TPM1-231	ENST00000561395	RPS6KL1	Q9Y6S9	549 aa		7.59	□□□□□ -1.19
TPM1-231	ENST00000561395	KIAA1549L	Q6ZVL6	1849 aa		7.59	□□□□□ -1.19
TPM1-231	ENST00000561395	THADA	Q6YHU6	1953 aa		7.59	□□□□□ -1.2
TPM1-231	ENST00000561395	ANKRD36	A6QL64	1941 aa		7.58	□□□□□ -1.2
TPM1-231	ENST00000561395	ASCC3	Q8N3C0	2202 aa	Known RBP	7.58	□□□□□ -1.2
TPM1-231	ENST00000561395	ZCWPW2	A0A1B0GU75	182 aa		7.58	□□□□□ -1.2
TPM1-231	ENST00000561395	LOC285095	A0A1B0GVY8	99 aa		7.58	□□□□□ -1.2
TPM1-231	ENST00000561395	TTC24	A2A3L6	582 aa	Predicted RBP	7.58	□□□□□ -1.2
TPM1-231	ENST00000561395	SHISA7	A6NL88	538 aa		7.58	□□□□□ -1.2
TPM1-231	ENST00000561395	FOXO6	A8MYZ6	492 aa		7.58	□□□□□ -1.2
TPM1-231	ENST00000561395	TAF4	O00268	1085 aa		7.58	□□□□□ -1.2
TPM1-231	ENST00000561395	HR	O43593	1189 aa		7.58	□□□□□ -1.2
TPM1-231	ENST00000561395	ATP9B	O43861	1147 aa		7.58	□□□□□ -1.2
TPM1-231	ENST00000561395	SNAP91	O60641	907 aa		7.58	□□□□□ -1.2
TPM1-231	ENST00000561395	GJB3	O75712	270 aa		7.58	□□□□□ -1.2
TPM1-231	ENST00000561395	TMCC1	O94876	653 aa		7.58	□□□□□ -1.2
TPM1-231	ENST00000561395	PENK	P01210	267 aa	Predicted RBP	7.58	□□□□□ -1.2
TPM1-231	ENST00000561395	CYBB	P04839	570 aa		7.58	□□□□□ -1.2
TPM1-231	ENST00000561395	SERPINF2	P08697	491 aa		7.58	□□□□□ -1.2
TPM1-231	ENST00000561395	ATXN1L	P0C7T5	689 aa	Known RBP	7.58	□□□□□ -1.2
TPM1-231	ENST00000561395	TPH1	P17752	444 aa		7.58	□□□□□ -1.2
TPM1-231	ENST00000561395	KRT15	P19012	456 aa		7.58	□□□□□ -1.2
TPM1-231	ENST00000561395	CR2	P20023	1033 aa		7.58	□□□□□ -1.2
TPM1-231	ENST00000561395	SPINK2	P20155	84 aa		7.58	□□□□□ -1.2
TPM1-231	ENST00000561395	RGR	P47804	291 aa		7.58	□□□□□ -1.2
TPM1-231	ENST00000561395	MGAT5	Q09328	741 aa		7.58	□□□□□ -1.2
TPM1-231	ENST00000561395	LMAN2	Q12907	356 aa		7.58	□□□□□ -1.2
TPM1-231	ENST00000561395	FOXC1	Q12948	553 aa		7.58	□□□□□ -1.2
TPM1-231	ENST00000561395	POU6F1	Q14863	301 aa		7.58	□□□□□ -1.2
TPM1-231	ENST00000561395	CYTH1	Q15438	398 aa		7.58	□□□□□ -1.2
TPM1-231	ENST00000561395	SLC1A5	Q15758	541 aa		7.58	□□□□□ -1.2
TPM1-231	ENST00000561395	PCSK7	Q16549	785 aa		7.58	□□□□□ -1.2
TPM1-231	ENST00000561395	ANKRD20A4	Q4UJ75	823 aa		7.58	□□□□□ -1.2
TPM1-231	ENST00000561395	PCID2	Q5JVF3	399 aa		7.58	□□□□□ -1.2
TPM1-231	ENST00000561395	STPG1	Q5TH74	334 aa		7.58	□□□□□ -1.2
TPM1-231	ENST00000561395	CES3	Q6UWW8	571 aa		7.58	□□□□□ -1.2
TPM1-231	ENST00000561395	TPGS1	Q6ZTW0	290 aa		7.58	□□□□□ -1.2
TPM1-231	ENST00000561395	MARK2	Q7KZI7	788 aa	Known RBP	7.58	□□□□□ -1.2
TPM1-231	ENST00000561395	RASSF3	Q86WH2	238 aa		7.58	□□□□□ -1.2
TPM1-231	ENST00000561395	CTAGE3P	Q8IX95	158 aa		7.58	□□□□□ -1.2
TPM1-231	ENST00000561395	SRRM1	Q8IYB3	904 aa	Known RBP	7.58	□□□□□ -1.2
TPM1-231	ENST00000561395	UNC5B	Q8IZJ1	945 aa		7.58	□□□□□ -1.2
TPM1-231	ENST00000561395	FAM160A2	Q8N612	972 aa	Predicted RBP	7.58	□□□□□ -1.2
TPM1-231	ENST00000561395	PPM1N	Q8N819	430 aa		7.58	□□□□□ -1.2
TPM1-231	ENST00000561395	SERBP1	Q8NC51	408 aa	Known RBP eCLIP	7.58	□□□□□ -1.2
TPM1-231	ENST00000561395	PPHLN1	Q8NEY8	458 aa	Known RBP	7.58	□□□□□ -1.2
TPM1-231	ENST00000561395	FIBIN	Q8TAL6	211 aa		7.58	□□□□□ -1.2
TPM1-231	ENST00000561395	ZCCHC14	Q8WYQ9	949 aa	Known RBP	7.58	□□□□□ -1.2
TPM1-231	ENST00000561395	FGF13	Q92913	245 aa		7.58	□□□□□ -1.2
TPM1-231	ENST00000561395	BHMT	Q93088	406 aa		7.58	□□□□□ -1.2
TPM1-231	ENST00000561395	ZDHHC16	Q969W1	377 aa		7.58	□□□□□ -1.2
TPM1-231	ENST00000561395	MARVELD3	Q96A59	401 aa		7.58	□□□□□ -1.2
TPM1-231	ENST00000561395	ZNF669	Q96BR6	464 aa	Predicted RBP	7.58	□□□□□ -1.2
TPM1-231	ENST00000561395	OTUB2	Q96DC9	234 aa		7.58	□□□□□ -1.2
TPM1-231	ENST00000561395	CERS2	Q96G23	380 aa		7.58	□□□□□ -1.2
TPM1-231	ENST00000561395	FEM1C	Q96JP0	617 aa		7.58	□□□□□ -1.2
TPM1-231	ENST00000561395	LMLN	Q96KR4	655 aa		7.58	□□□□□ -1.2
TPM1-231	ENST00000561395	ZSWIM3	Q96MP5	696 aa		7.58	□□□□□ -1.2
TPM1-231	ENST00000561395	FCRL3	Q96P31	734 aa	Predicted RBP	7.58	□□□□□ -1.2
TPM1-231	ENST00000561395	SELENOS	Q9BQE4	189 aa		7.58	□□□□□ -1.2
TPM1-231	ENST00000561395	C2orf49	Q9BVC5	232 aa	Predicted RBP	7.58	□□□□□ -1.2
TPM1-231	ENST00000561395	CAPS2	Q9BXY5	557 aa		7.58	□□□□□ -1.2
TPM1-231	ENST00000561395	KIF9	Q9HAQ2	790 aa		7.58	□□□□□ -1.2
TPM1-231	ENST00000561395	HEBP1	Q9NRV9	189 aa		7.58	□□□□□ -1.2
TPM1-231	ENST00000561395	RXFP3	Q9NSD7	469 aa		7.58	□□□□□ -1.2
TPM1-231	ENST00000561395	TBC1D14	Q9P2M4	693 aa		7.58	□□□□□ -1.2
TPM1-231	ENST00000561395	LHX3	Q9UBR4	397 aa		7.58	□□□□□ -1.2
TPM1-231	ENST00000561395	VPS51	Q9UID3	782 aa		7.58	□□□□□ -1.2
TPM1-231	ENST00000561395	TCAF1	Q9Y4C2	921 aa		7.58	□□□□□ -1.2
TPM1-231	ENST00000561395	IKBKG	Q9Y6K9	419 aa		7.58	□□□□□ -1.2
TPM1-231	ENST00000561395	FAM169A	Q9Y6X4	670 aa		7.58	□□□□□ -1.2
TPM1-231	ENST00000561395	SMG1	Q96Q15	3661 aa	Known RBP	7.58	□□□□□ -1.2
TPM1-231	ENST00000561395	NAV2	Q8IVL1	2488 aa		7.57	□□□□□ -1.2
TPM1-231	ENST00000561395	MYOF	Q9NZM1	2061 aa		7.57	□□□□□ -1.2
TPM1-231	ENST00000561395	IQANK1	A0A1B0GTG1	560 aa		7.57	□□□□□ -1.2
TPM1-231	ENST00000561395	CXorf51A	A0A1B0GTR3	108 aa		7.57	□□□□□ -1.2
TPM1-231	ENST00000561395	TMEM120B	A0PK00	339 aa		7.57	□□□□□ -1.2
TPM1-231	ENST00000561395		A6NNZ2	444 aa		7.57	□□□□□ -1.2
TPM1-231	ENST00000561395	CHURC1-FNTB	B4DL54	471 aa		7.57	□□□□□ -1.2
TPM1-231	ENST00000561395	MAN2B1	O00754	1011 aa		7.57	□□□□□ -1.2
TPM1-231	ENST00000561395	SLC9A3R1	O14745	358 aa	Predicted RBP	7.57	□□□□□ -1.2

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