RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 COPS2P61201 443 aa13.97□□□□□ -0.17
TPM1-230ENST00000561266 OTUD4Q01804 1114 aaKnown RBP13.97□□□□□ -0.17
TPM1-230ENST00000561266 BNIP3Q12983 259 aa13.97□□□□□ -0.17
TPM1-230ENST00000561266 STAT4Q14765 748 aa13.97□□□□□ -0.17
TPM1-230ENST00000561266 NOMO1Q15155 1222 aa13.97□□□□□ -0.17
TPM1-230ENST00000561266 WSCD2Q2TBF2 565 aa13.97□□□□□ -0.17
TPM1-230ENST00000561266 DBX2Q6ZNG2 339 aa13.97□□□□□ -0.17
TPM1-230ENST00000561266 ZNF662Q6ZS27 426 aa13.97□□□□□ -0.17
TPM1-230ENST00000561266 Q6ZSR6 202 aa13.97□□□□□ -0.17
TPM1-230ENST00000561266 DPPA4Q7L190 304 aa13.97□□□□□ -0.17
TPM1-230ENST00000561266 CBARPQ8N350 705 aaPredicted RBP13.97□□□□□ -0.17
TPM1-230ENST00000561266 RNF10Q8N5U6 811 aaKnown RBP13.97□□□□□ -0.17
TPM1-230ENST00000561266 PLA2G15Q8NCC3 412 aa13.97□□□□□ -0.17
TPM1-230ENST00000561266 DEFB124Q8NES8 71 aa13.97□□□□□ -0.17
TPM1-230ENST00000561266 SPATA22Q8NHS9 363 aa13.97□□□□□ -0.17
TPM1-230ENST00000561266 ACTL9Q8TC94 416 aa13.97□□□□□ -0.17
TPM1-230ENST00000561266 ASB12Q8WXK4 309 aa13.97□□□□□ -0.17
TPM1-230ENST00000561266 P3H4Q92791 437 aa13.97□□□□□ -0.17
TPM1-230ENST00000561266 TADA1Q96BN2 335 aa13.97□□□□□ -0.17
TPM1-230ENST00000561266 PDLIM2Q96JY6 352 aa13.97□□□□□ -0.17
TPM1-230ENST00000561266 QKIQ96PU8 341 aaKnown RBP eCLIP13.97□□□□□ -0.17
TPM1-230ENST00000561266 LENG8Q96PV6 779 aaPredicted RBP13.97□□□□□ -0.17
TPM1-230ENST00000561266 RBM15Q96T37 977 aaKnown RBP eCLIP13.97□□□□□ -0.17
TPM1-230ENST00000561266 TDRD1Q9BXT4 1180 aaKnown RBP13.97□□□□□ -0.17
TPM1-230ENST00000561266 GPR27Q9NS67 375 aa13.97□□□□□ -0.17
TPM1-230ENST00000561266 TM7SF3Q9NS93 570 aa13.97□□□□□ -0.17
TPM1-230ENST00000561266 TPX2Q9ULW0 747 aaKnown RBP13.97□□□□□ -0.17
TPM1-230ENST00000561266 R3HDM2Q9Y2K5 976 aaKnown RBP13.97□□□□□ -0.17
TPM1-230ENST00000561266 PPP2R2CQ9Y2T4 447 aa13.97□□□□□ -0.17
TPM1-230ENST00000561266 HS3ST3A1Q9Y663 406 aa13.97□□□□□ -0.17
TPM1-230ENST00000561266 A0A1B0GTQ1 180 aa13.96□□□□□ -0.17
TPM1-230ENST00000561266 APOC4-APOC2K7ER74 178 aa13.96□□□□□ -0.17
TPM1-230ENST00000561266 PPP1R12AO14974 1030 aaPredicted RBP13.96□□□□□ -0.17
TPM1-230ENST00000561266 TM7SF2O76062 418 aa13.96□□□□□ -0.17
TPM1-230ENST00000561266 MT-CYBP00156 380 aaPredicted RBP13.96□□□□□ -0.17
TPM1-230ENST00000561266 APOC2P02655 101 aa13.96□□□□□ -0.17
TPM1-230ENST00000561266 CCDC175P0C221 793 aa13.96□□□□□ -0.17
TPM1-230ENST00000561266 RBL1P28749 1068 aa13.96□□□□□ -0.17
TPM1-230ENST00000561266 AKT2P31751 481 aa13.96□□□□□ -0.17
TPM1-230ENST00000561266 PFN3P60673 137 aa13.96□□□□□ -0.17
TPM1-230ENST00000561266 ELP6Q0PNE2 266 aa13.96□□□□□ -0.17
TPM1-230ENST00000561266 SGCGQ13326 291 aa13.96□□□□□ -0.17
TPM1-230ENST00000561266 KLF1Q13351 362 aaPredicted RBP13.96□□□□□ -0.17
TPM1-230ENST00000561266 IRF4Q15306 451 aa13.96□□□□□ -0.17
TPM1-230ENST00000561266 CNGA3Q16281 694 aa13.96□□□□□ -0.17
TPM1-230ENST00000561266 TEX44Q53QW1 395 aa13.96□□□□□ -0.17
TPM1-230ENST00000561266 ZNF542PQ5EBM4 170 aa13.96□□□□□ -0.17
TPM1-230ENST00000561266 RALGPS1Q5JS13 557 aa13.96□□□□□ -0.17
TPM1-230ENST00000561266 CFAP58Q5T655 872 aa13.96□□□□□ -0.17
TPM1-230ENST00000561266 KCTD16Q68DU8 428 aa13.96□□□□□ -0.17
TPM1-230ENST00000561266 KANSL1Q7Z3B3 1105 aa13.96□□□□□ -0.17
TPM1-230ENST00000561266 DGLUCYQ7Z3D6 616 aa13.96□□□□□ -0.17
TPM1-230ENST00000561266 HSD11B1LQ7Z5J1 315 aa13.96□□□□□ -0.17
TPM1-230ENST00000561266 GATAD2AQ86YP4 633 aa13.96□□□□□ -0.17
TPM1-230ENST00000561266 REXO1L1PQ8IX06 675 aa13.96□□□□□ -0.17
TPM1-230ENST00000561266 TFB1MQ8WVM0 346 aaKnown RBP13.96□□□□□ -0.17
TPM1-230ENST00000561266 IMP4Q96G21 291 aaKnown RBP13.96□□□□□ -0.17
TPM1-230ENST00000561266 KLHDC7BQ96G42 594 aa13.96□□□□□ -0.17
TPM1-230ENST00000561266 ELF4Q99607 663 aaPredicted RBP13.96□□□□□ -0.17
TPM1-230ENST00000561266 GORASP1Q9BQQ3 440 aa13.96□□□□□ -0.17
TPM1-230ENST00000561266 GLOD4Q9HC38 313 aa13.96□□□□□ -0.17
TPM1-230ENST00000561266 AMACRQ9UHK6 382 aa13.96□□□□□ -0.17
TPM1-230ENST00000561266 KLF15Q9UIH9 416 aa13.96□□□□□ -0.17
TPM1-230ENST00000561266 EFR3BQ9Y2G0 817 aa13.96□□□□□ -0.17
TPM1-230ENST00000561266 PPIL1Q9Y3C6 166 aa13.96□□□□□ -0.17
TPM1-230ENST00000561266 MED19A0JLT2 244 aaPredicted RBP13.95□□□□□ -0.18
TPM1-230ENST00000561266 KRT86O43790 486 aa13.95□□□□□ -0.18
TPM1-230ENST00000561266 KCNK5O95279 499 aa13.95□□□□□ -0.18
TPM1-230ENST00000561266 CER1O95813 267 aa13.95□□□□□ -0.18
TPM1-230ENST00000561266 HNF1BP35680 557 aa13.95□□□□□ -0.18
TPM1-230ENST00000561266 SUOXP51687 545 aa13.95□□□□□ -0.18
TPM1-230ENST00000561266 FZD2Q14332 565 aa13.95□□□□□ -0.18
TPM1-230ENST00000561266 CDKN3Q16667 212 aa13.95□□□□□ -0.18
TPM1-230ENST00000561266 PPM1JQ5JR12 505 aa13.95□□□□□ -0.18
TPM1-230ENST00000561266 ARMC12Q5T9G4 340 aa13.95□□□□□ -0.18
TPM1-230ENST00000561266 MEI1Q5TIA1 1274 aa13.95□□□□□ -0.18
TPM1-230ENST00000561266 ERAP2Q6P179 960 aa13.95□□□□□ -0.18
TPM1-230ENST00000561266 CRTC1Q6UUV9 634 aa13.95□□□□□ -0.18
TPM1-230ENST00000561266 IL27RAQ6UWB1 636 aa13.95□□□□□ -0.18
TPM1-230ENST00000561266 KYAT3Q6YP21 454 aaKnown RBP13.95□□□□□ -0.18
TPM1-230ENST00000561266 KDELC2Q7Z4H8 507 aa13.95□□□□□ -0.18
TPM1-230ENST00000561266 PTAR1Q7Z6K3 402 aaPredicted RBP13.95□□□□□ -0.18
TPM1-230ENST00000561266 IQCHQ86VS3 1027 aa13.95□□□□□ -0.18
TPM1-230ENST00000561266 SYCE1Q8N0S2 351 aa13.95□□□□□ -0.18
TPM1-230ENST00000561266 ZNF567Q8N184 647 aa13.95□□□□□ -0.18
TPM1-230ENST00000561266 TEKT5Q96M29 485 aa13.95□□□□□ -0.18
TPM1-230ENST00000561266 COQ10AQ96MF6 247 aa13.95□□□□□ -0.18
TPM1-230ENST00000561266 MCCC1Q96RQ3 725 aaPredicted RBP13.95□□□□□ -0.18
TPM1-230ENST00000561266 TRIB3Q96RU7 358 aa13.95□□□□□ -0.18
TPM1-230ENST00000561266 TSGA10Q9BZW7 698 aa13.95□□□□□ -0.18
TPM1-230ENST00000561266 USP29Q9HBJ7 922 aa13.95□□□□□ -0.18
TPM1-230ENST00000561266 UBP1Q9NZI7 540 aa13.95□□□□□ -0.18
TPM1-230ENST00000561266 PHTF1Q9UMS5 762 aa13.95□□□□□ -0.18
TPM1-230ENST00000561266 SCN8AQ9UQD0 1980 aa13.94□□□□□ -0.18
TPM1-230ENST00000561266 MIF4GDA9UHW6 222 aaKnown RBP13.94□□□□□ -0.18
TPM1-230ENST00000561266 H7C0C1 242 aa13.94□□□□□ -0.18
TPM1-230ENST00000561266 K7ESM1 405 aa13.94□□□□□ -0.18
TPM1-230ENST00000561266 SDC3O75056 442 aa13.94□□□□□ -0.18
TPM1-230ENST00000561266 CBFA2T3O75081 653 aa13.94□□□□□ -0.18
TPM1-230ENST00000561266 RECQL5O94762 991 aaPredicted RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms