RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 PRELID2Q8N945 189 aa9.68□□□□□ -0.86
RABGGTA-221ENST00000561055 C12orf50Q8NA57 414 aaPredicted RBP9.68□□□□□ -0.86
RABGGTA-221ENST00000561055 FAM174AQ8TBP5 190 aa9.68□□□□□ -0.86
RABGGTA-221ENST00000561055 COG1Q8WTW3 980 aa9.68□□□□□ -0.86
RABGGTA-221ENST00000561055 ATG4AQ8WYN0 398 aa9.68□□□□□ -0.86
RABGGTA-221ENST00000561055 RBM15Q96T37 977 aaKnown RBP eCLIP9.68□□□□□ -0.86
RABGGTA-221ENST00000561055 TMEM121Q9BTD3 319 aa9.68□□□□□ -0.86
RABGGTA-221ENST00000561055 ADGRE3Q9BY15 652 aa9.68□□□□□ -0.86
RABGGTA-221ENST00000561055 SLC17A9Q9BYT1 436 aa9.68□□□□□ -0.86
RABGGTA-221ENST00000561055 ARRDC1-AS1Q9H2J1 176 aa9.68□□□□□ -0.86
RABGGTA-221ENST00000561055 KCTD5Q9NXV2 234 aa9.68□□□□□ -0.86
RABGGTA-221ENST00000561055 NCDNQ9UBB6 729 aa9.68□□□□□ -0.86
RABGGTA-221ENST00000561055 RNF14Q9UBS8 474 aa9.68□□□□□ -0.86
RABGGTA-221ENST00000561055 FAM153AQ9UHL3 310 aa9.68□□□□□ -0.86
RABGGTA-221ENST00000561055 CHKBQ9Y259 395 aa9.68□□□□□ -0.86
RABGGTA-221ENST00000561055 AAR2Q9Y312 384 aaKnown RBP9.68□□□□□ -0.86
RABGGTA-221ENST00000561055 TTLL3Q9Y4R7 772 aa9.68□□□□□ -0.86
RABGGTA-221ENST00000561055 HS3ST3A1Q9Y663 406 aa9.68□□□□□ -0.86
RABGGTA-221ENST00000561055 SAR1BQ9Y6B6 198 aa9.68□□□□□ -0.86
RABGGTA-221ENST00000561055 ARID1BQ8NFD5 2236 aaPredicted RBP9.68□□□□□ -0.86
RABGGTA-221ENST00000561055 PCNX2A6NKB5 2137 aa9.67□□□□□ -0.86
RABGGTA-221ENST00000561055 PRAMEF26H0Y7S4 382 aa9.67□□□□□ -0.86
RABGGTA-221ENST00000561055 TM7SF2O76062 418 aa9.67□□□□□ -0.86
RABGGTA-221ENST00000561055 NDST3O95803 873 aa9.67□□□□□ -0.86
RABGGTA-221ENST00000561055 MT-CYBP00156 380 aaPredicted RBP9.67□□□□□ -0.86
RABGGTA-221ENST00000561055 TUBB4AP04350 444 aa9.67□□□□□ -0.86
RABGGTA-221ENST00000561055 CYP2A6P11509 494 aaPredicted RBP9.67□□□□□ -0.86
RABGGTA-221ENST00000561055 GNSP15586 552 aa9.67□□□□□ -0.86
RABGGTA-221ENST00000561055 ITIH2P19823 946 aa9.67□□□□□ -0.86
RABGGTA-221ENST00000561055 MAOBP27338 520 aa9.67□□□□□ -0.86
RABGGTA-221ENST00000561055 VIPR1P32241 457 aa9.67□□□□□ -0.86
RABGGTA-221ENST00000561055 GEMP55040 296 aa9.67□□□□□ -0.86
RABGGTA-221ENST00000561055 GDF10P55107 478 aa9.67□□□□□ -0.86
RABGGTA-221ENST00000561055 CDK18Q07002 472 aa9.67□□□□□ -0.86
RABGGTA-221ENST00000561055 OVGP1Q12889 678 aa9.67□□□□□ -0.86
RABGGTA-221ENST00000561055 NAPEPLDQ6IQ20 393 aa9.67□□□□□ -0.86
RABGGTA-221ENST00000561055 USP45Q70EL2 814 aa9.67□□□□□ -0.86
RABGGTA-221ENST00000561055 ARMCX6Q7L4S7 300 aa9.67□□□□□ -0.86
RABGGTA-221ENST00000561055 IQCHQ86VS3 1027 aa9.67□□□□□ -0.86
RABGGTA-221ENST00000561055 CREG2Q8IUH2 290 aa9.67□□□□□ -0.86
RABGGTA-221ENST00000561055 RGL4Q8IZJ4 473 aa9.67□□□□□ -0.86
RABGGTA-221ENST00000561055 FAM71DQ8N9W8 422 aa9.67□□□□□ -0.86
RABGGTA-221ENST00000561055 MFSD2AQ8NA29 543 aa9.67□□□□□ -0.86
RABGGTA-221ENST00000561055 TMEM145Q8NBT3 493 aa9.67□□□□□ -0.86
RABGGTA-221ENST00000561055 DENND6BQ8NEG7 585 aa9.67□□□□□ -0.86
RABGGTA-221ENST00000561055 SPATA22Q8NHS9 363 aa9.67□□□□□ -0.86
RABGGTA-221ENST00000561055 CCDC110Q8TBZ0 833 aa9.67□□□□□ -0.86
RABGGTA-221ENST00000561055 PDCD6IPQ8WUM4 868 aaKnown RBP9.67□□□□□ -0.86
RABGGTA-221ENST00000561055 C1orf54Q8WWF1 131 aa9.67□□□□□ -0.86
RABGGTA-221ENST00000561055 PIGKQ92643 395 aa9.67□□□□□ -0.86
RABGGTA-221ENST00000561055 CENPTQ96BT3 561 aa9.67□□□□□ -0.86
RABGGTA-221ENST00000561055 OXNAD1Q96HP4 312 aaPredicted RBP9.67□□□□□ -0.86
RABGGTA-221ENST00000561055 MS4A14Q96JA4 679 aa9.67□□□□□ -0.86
RABGGTA-221ENST00000561055 MRGPRX2Q96LB1 330 aa9.67□□□□□ -0.86
RABGGTA-221ENST00000561055 SRPK1Q96SB4 655 aaKnown RBP9.67□□□□□ -0.86
RABGGTA-221ENST00000561055 KLF6Q99612 283 aaPredicted RBP9.67□□□□□ -0.86
RABGGTA-221ENST00000561055 GORASP1Q9BQQ3 440 aa9.67□□□□□ -0.86
RABGGTA-221ENST00000561055 ARNT2Q9HBZ2 717 aa9.67□□□□□ -0.86
RABGGTA-221ENST00000561055 CAPN10Q9HC96 672 aa9.67□□□□□ -0.86
RABGGTA-221ENST00000561055 MAGEE1Q9HCI5 957 aa9.67□□□□□ -0.86
RABGGTA-221ENST00000561055 TM9SF3Q9HD45 589 aa9.67□□□□□ -0.86
RABGGTA-221ENST00000561055 RSPH14Q9UHP6 348 aa9.67□□□□□ -0.86
RABGGTA-221ENST00000561055 GGT7Q9UJ14 662 aa9.67□□□□□ -0.86
RABGGTA-221ENST00000561055 SLC6A14Q9UN76 642 aa9.67□□□□□ -0.86
RABGGTA-221ENST00000561055 ZNF148Q9UQR1 794 aa9.67□□□□□ -0.86
RABGGTA-221ENST00000561055 ITM2BQ9Y287 266 aa9.67□□□□□ -0.86
RABGGTA-221ENST00000561055 GVINP1Q7Z2Y8 2422 aa9.67□□□□□ -0.86
RABGGTA-221ENST00000561055 PIKFYVEQ9Y2I7 2098 aa9.67□□□□□ -0.86
RABGGTA-221ENST00000561055 A0A1W2PR77 199 aa9.66□□□□□ -0.86
RABGGTA-221ENST00000561055 IGLON5A6NGN9 336 aa9.66□□□□□ -0.86
RABGGTA-221ENST00000561055 CAPN8A6NHC0 703 aa9.66□□□□□ -0.86
RABGGTA-221ENST00000561055 NPIPB15A6NHN6 443 aaPredicted RBP9.66□□□□□ -0.86
RABGGTA-221ENST00000561055 NEMP1O14524 444 aa9.66□□□□□ -0.86
RABGGTA-221ENST00000561055 TOR1BO14657 336 aa9.66□□□□□ -0.86
RABGGTA-221ENST00000561055 VILLO15195 856 aa9.66□□□□□ -0.86
RABGGTA-221ENST00000561055 ZNF185O15231 689 aa9.66□□□□□ -0.86
RABGGTA-221ENST00000561055 PSMD3O43242 534 aa9.66□□□□□ -0.86
RABGGTA-221ENST00000561055 GFRA3O60609 400 aa9.66□□□□□ -0.86
RABGGTA-221ENST00000561055 MMP20O60882 483 aa9.66□□□□□ -0.86
RABGGTA-221ENST00000561055 HEXIM1O94992 359 aaKnown RBP9.66□□□□□ -0.86
RABGGTA-221ENST00000561055 PAK4O96013 591 aaPredicted RBP9.66□□□□□ -0.86
RABGGTA-221ENST00000561055 ZNF30P17039 623 aa9.66□□□□□ -0.86
RABGGTA-221ENST00000561055 GM2AP17900 193 aa9.66□□□□□ -0.86
RABGGTA-221ENST00000561055 HNRNPA2B1P22626 353 aaKnown RBP9.66□□□□□ -0.86
RABGGTA-221ENST00000561055 LHCGRP22888 699 aa9.66□□□□□ -0.86
RABGGTA-221ENST00000561055 PSMB4P28070 264 aa9.66□□□□□ -0.86
RABGGTA-221ENST00000561055 ADRA1AP35348 466 aa9.66□□□□□ -0.86
RABGGTA-221ENST00000561055 HNF1BP35680 557 aa9.66□□□□□ -0.86
RABGGTA-221ENST00000561055 AFF3P51826 1226 aaKnown RBP9.66□□□□□ -0.86
RABGGTA-221ENST00000561055 WNT3AP56704 352 aa9.66□□□□□ -0.86
RABGGTA-221ENST00000561055 FAM193AP78312 1265 aa9.66□□□□□ -0.86
RABGGTA-221ENST00000561055 LMNB2Q03252 620 aa9.66□□□□□ -0.86
RABGGTA-221ENST00000561055 SPEM2Q0P670 501 aa9.66□□□□□ -0.86
RABGGTA-221ENST00000561055 SNX1Q13596 522 aa9.66□□□□□ -0.86
RABGGTA-221ENST00000561055 CDKN3Q16667 212 aa9.66□□□□□ -0.86
RABGGTA-221ENST00000561055 QPCTQ16769 361 aa9.66□□□□□ -0.86
RABGGTA-221ENST00000561055 FAM182AQ5T1J6 154 aa9.66□□□□□ -0.86
RABGGTA-221ENST00000561055 SEL1L3Q68CR1 1132 aa9.66□□□□□ -0.86
RABGGTA-221ENST00000561055 KCTD11Q693B1 232 aa9.66□□□□□ -0.86
RABGGTA-221ENST00000561055 RANBP10Q6VN20 620 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms