RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 C20orf27Q9GZN8 174 aa10.93□□□□□ -0.66
SNRPA1-211ENST00000560433 RETREG1Q9H6L5 497 aa10.93□□□□□ -0.66
SNRPA1-211ENST00000560433 TRIOO75962 3097 aa10.92□□□□□ -0.66
SNRPA1-211ENST00000560433 VCANP13611 3396 aa10.92□□□□□ -0.66
SNRPA1-211ENST00000560433 FAM95CA0A1B0GW59 222 aa10.92□□□□□ -0.66
SNRPA1-211ENST00000560433 ANTXRLA6NF34 631 aa10.92□□□□□ -0.66
SNRPA1-211ENST00000560433 OTOL1A6NHN0 477 aaPredicted RBP10.92□□□□□ -0.66
SNRPA1-211ENST00000560433 GSRP00390 522 aa10.92□□□□□ -0.66
SNRPA1-211ENST00000560433 SRCP12931 536 aa10.92□□□□□ -0.66
SNRPA1-211ENST00000560433 HOXA9P31269 272 aa10.92□□□□□ -0.66
SNRPA1-211ENST00000560433 NAB1Q13506 487 aa10.92□□□□□ -0.66
SNRPA1-211ENST00000560433 CHI3L2Q15782 390 aa10.92□□□□□ -0.66
SNRPA1-211ENST00000560433 SPRED3Q2MJR0 410 aa10.92□□□□□ -0.66
SNRPA1-211ENST00000560433 INO80DQ53TQ3 878 aaPredicted RBP10.92□□□□□ -0.66
SNRPA1-211ENST00000560433 RETSATQ6NUM9 610 aa10.92□□□□□ -0.66
SNRPA1-211ENST00000560433 ZNF783Q6ZMS7 281 aa10.92□□□□□ -0.66
SNRPA1-211ENST00000560433 EP400NLQ6ZTU2 488 aa10.92□□□□□ -0.66
SNRPA1-211ENST00000560433 SRLQ86TD4 932 aa10.92□□□□□ -0.66
SNRPA1-211ENST00000560433 C2CD4AQ8NCU7 369 aaPredicted RBP10.92□□□□□ -0.66
SNRPA1-211ENST00000560433 PTCD2Q8WV60 388 aaKnown RBP10.92□□□□□ -0.66
SNRPA1-211ENST00000560433 RHOJQ9H4E5 214 aa10.92□□□□□ -0.66
SNRPA1-211ENST00000560433 EBF3Q9H4W6 596 aa10.92□□□□□ -0.66
SNRPA1-211ENST00000560433 MRM3Q9HC36 420 aaKnown RBP10.92□□□□□ -0.66
SNRPA1-211ENST00000560433 ZDHHC7Q9NXF8 308 aa10.92□□□□□ -0.66
SNRPA1-211ENST00000560433 SRRM3A6NNA2 597 aaPredicted RBP10.92□□□□□ -0.66
SNRPA1-211ENST00000560433 KITP10721 976 aa10.92□□□□□ -0.66
SNRPA1-211ENST00000560433 SERPINB8P50452 374 aa10.92□□□□□ -0.66
SNRPA1-211ENST00000560433 DUSP6Q16828 381 aa10.92□□□□□ -0.66
SNRPA1-211ENST00000560433 GEN1Q17RS7 908 aa10.92□□□□□ -0.66
SNRPA1-211ENST00000560433 MPP7Q5T2T1 576 aa10.92□□□□□ -0.66
SNRPA1-211ENST00000560433 RNF187Q5TA31 235 aaPredicted RBP10.92□□□□□ -0.66
SNRPA1-211ENST00000560433 NAIF1Q69YI7 327 aaPredicted RBP10.92□□□□□ -0.66
SNRPA1-211ENST00000560433 C12orf40Q86WS4 652 aa10.92□□□□□ -0.66
SNRPA1-211ENST00000560433 ZSWIM9Q86XI8 627 aa10.92□□□□□ -0.66
SNRPA1-211ENST00000560433 CILP2Q8IUL8 1156 aa10.92□□□□□ -0.66
SNRPA1-211ENST00000560433 NUDCD3Q8IVD9 361 aa10.92□□□□□ -0.66
SNRPA1-211ENST00000560433 CNTN4Q8IWV2 1026 aa10.92□□□□□ -0.66
SNRPA1-211ENST00000560433 KCTD4Q8WVF5 259 aa10.92□□□□□ -0.66
SNRPA1-211ENST00000560433 EID2BQ96D98 161 aa10.92□□□□□ -0.66
SNRPA1-211ENST00000560433 LMLNQ96KR4 655 aa10.92□□□□□ -0.66
SNRPA1-211ENST00000560433 RANBP9Q96S59 729 aa10.92□□□□□ -0.66
SNRPA1-211ENST00000560433 GPR22Q99680 433 aa10.92□□□□□ -0.66
SNRPA1-211ENST00000560433 OLFM1Q99784 485 aa10.92□□□□□ -0.66
SNRPA1-211ENST00000560433 NPHS2Q9NP85 383 aa10.92□□□□□ -0.66
SNRPA1-211ENST00000560433 ZDHHC4Q9NPG8 344 aa10.92□□□□□ -0.66
SNRPA1-211ENST00000560433 MARCOQ9UEW3 520 aaPredicted RBP10.92□□□□□ -0.66
SNRPA1-211ENST00000560433 DCTN4Q9UJW0 460 aa10.92□□□□□ -0.66
SNRPA1-211ENST00000560433 GGA2Q9UJY4 613 aa10.92□□□□□ -0.66
SNRPA1-211ENST00000560433 TIMM44O43615 452 aa10.91□□□□□ -0.66
SNRPA1-211ENST00000560433 EPOP01588 193 aa10.91□□□□□ -0.66
SNRPA1-211ENST00000560433 ALADP13716 330 aa10.91□□□□□ -0.66
SNRPA1-211ENST00000560433 TAS2R39P59534 338 aa10.91□□□□□ -0.66
SNRPA1-211ENST00000560433 FRG1Q14331 258 aaKnown RBP10.91□□□□□ -0.66
SNRPA1-211ENST00000560433 POM121L1PQ3SYA9 428 aa10.91□□□□□ -0.66
SNRPA1-211ENST00000560433 FASTKD1Q53R41 847 aaKnown RBP10.91□□□□□ -0.66
SNRPA1-211ENST00000560433 FAM78AQ5JUQ0 283 aa10.91□□□□□ -0.66
SNRPA1-211ENST00000560433 ATG14Q6ZNE5 492 aa10.91□□□□□ -0.66
SNRPA1-211ENST00000560433 SPATA21Q7Z572 469 aa10.91□□□□□ -0.66
SNRPA1-211ENST00000560433 CCDC197Q8NCU1 140 aa10.91□□□□□ -0.66
SNRPA1-211ENST00000560433 FGF13Q92913 245 aa10.91□□□□□ -0.66
SNRPA1-211ENST00000560433 ACDQ96AP0 544 aa10.91□□□□□ -0.66
SNRPA1-211ENST00000560433 CDKN2AIPNLQ96HQ2 116 aa10.91□□□□□ -0.66
SNRPA1-211ENST00000560433 RMDN2Q96LZ7 410 aa10.91□□□□□ -0.66
SNRPA1-211ENST00000560433 NSRP1Q9H0G5 558 aaKnown RBP10.91□□□□□ -0.66
SNRPA1-211ENST00000560433 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.9□□□□□ -0.66
SNRPA1-211ENST00000560433 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.9□□□□□ -0.66
SNRPA1-211ENST00000560433 TK2O00142 265 aa10.9□□□□□ -0.66
SNRPA1-211ENST00000560433 CD3EAPO15446 510 aaKnown RBP10.9□□□□□ -0.66
SNRPA1-211ENST00000560433 PLIN3O60664 434 aa10.9□□□□□ -0.66
SNRPA1-211ENST00000560433 EDF1O60869 148 aaKnown RBP10.9□□□□□ -0.66
SNRPA1-211ENST00000560433 LYPLA1O75608 230 aaPredicted RBP10.9□□□□□ -0.66
SNRPA1-211ENST00000560433 FGF19O95750 216 aa10.9□□□□□ -0.66
SNRPA1-211ENST00000560433 GLP2RO95838 553 aa10.9□□□□□ -0.66
SNRPA1-211ENST00000560433 PENKP01210 267 aaPredicted RBP10.9□□□□□ -0.66
SNRPA1-211ENST00000560433 SLC35E2BP0CK96 405 aa10.9□□□□□ -0.66
SNRPA1-211ENST00000560433 PABPC1P11940 636 aaKnown RBP10.9□□□□□ -0.66
SNRPA1-211ENST00000560433 ARSAP15289 507 aa10.9□□□□□ -0.66
SNRPA1-211ENST00000560433 DDX6P26196 483 aaKnown RBP eCLIP10.9□□□□□ -0.66
SNRPA1-211ENST00000560433 CD151P48509 253 aa10.9□□□□□ -0.66
SNRPA1-211ENST00000560433 CSE1LP55060 971 aaKnown RBP10.9□□□□□ -0.66
SNRPA1-211ENST00000560433 NSUN2Q08J23 767 aaKnown RBP eCLIP10.9□□□□□ -0.66
SNRPA1-211ENST00000560433 DLG1Q12959 904 aa10.9□□□□□ -0.66
SNRPA1-211ENST00000560433 ZNF449Q6P9G9 518 aa10.9□□□□□ -0.66
SNRPA1-211ENST00000560433 Q6ZVU0 165 aa10.9□□□□□ -0.66
SNRPA1-211ENST00000560433 PIM3Q86V86 326 aa10.9□□□□□ -0.66
SNRPA1-211ENST00000560433 C10orf107Q8IVU9 208 aa10.9□□□□□ -0.66
SNRPA1-211ENST00000560433 SFTPA1Q8IWL2 248 aa10.9□□□□□ -0.66
SNRPA1-211ENST00000560433 GRIN3AQ8TCU5 1115 aa10.9□□□□□ -0.66
SNRPA1-211ENST00000560433 SGF29Q96ES7 293 aa10.9□□□□□ -0.66
SNRPA1-211ENST00000560433 OMDQ99983 421 aa10.9□□□□□ -0.66
SNRPA1-211ENST00000560433 CIPCQ9C0C6 399 aa10.9□□□□□ -0.66
SNRPA1-211ENST00000560433 ABCF3Q9NUQ8 709 aa10.9□□□□□ -0.66
SNRPA1-211ENST00000560433 POLR3BQ9NW08 1133 aaPredicted RBP10.9□□□□□ -0.66
SNRPA1-211ENST00000560433 DUS2Q9NX74 493 aaKnown RBP10.9□□□□□ -0.66
SNRPA1-211ENST00000560433 FKBPLQ9UIM3 349 aa10.9□□□□□ -0.66
SNRPA1-211ENST00000560433 MSRAQ9UJ68 235 aa10.9□□□□□ -0.66
SNRPA1-211ENST00000560433 ZNF197O14709 1029 aa10.9□□□□□ -0.66
SNRPA1-211ENST00000560433 GLRA3O75311 464 aa10.9□□□□□ -0.66
SNRPA1-211ENST00000560433 ALDH3A1P30838 453 aa10.9□□□□□ -0.66
SNRPA1-211ENST00000560433 BCL2L1Q07817 233 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms