RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 CHST14Q8NCH0 376 aa5.29□□□□□ -1.56
SPG11-220ENST00000559933 CSGALNACT1Q8TDX6 532 aa5.29□□□□□ -1.56
SPG11-220ENST00000559933 EPS8L3Q8TE67 593 aaKnown RBP5.29□□□□□ -1.56
SPG11-220ENST00000559933 MAIP1Q8WWC4 291 aa5.29□□□□□ -1.56
SPG11-220ENST00000559933 MAML1Q92585 1016 aa5.29□□□□□ -1.56
SPG11-220ENST00000559933 OTUB2Q96DC9 234 aa5.29□□□□□ -1.56
SPG11-220ENST00000559933 OXNAD1Q96HP4 312 aaPredicted RBP5.29□□□□□ -1.56
SPG11-220ENST00000559933 MRGPRX3Q96LB0 322 aa5.29□□□□□ -1.56
SPG11-220ENST00000559933 GDAP1L1Q96MZ0 367 aa5.29□□□□□ -1.56
SPG11-220ENST00000559933 SPATA13Q96N96 652 aa5.29□□□□□ -1.56
SPG11-220ENST00000559933 RBM15Q96T37 977 aaKnown RBP eCLIP5.29□□□□□ -1.56
SPG11-220ENST00000559933 TRIM56Q9BRZ2 755 aaKnown RBP5.29□□□□□ -1.56
SPG11-220ENST00000559933 MLPHQ9BV36 600 aaPredicted RBP5.29□□□□□ -1.56
SPG11-220ENST00000559933 TUBB2BQ9BVA1 445 aa5.29□□□□□ -1.56
SPG11-220ENST00000559933 MAGEH1Q9H213 219 aa5.29□□□□□ -1.56
SPG11-220ENST00000559933 PCDH9Q9HC56 1237 aa5.29□□□□□ -1.56
SPG11-220ENST00000559933 EPB41L5Q9HCM4 733 aa5.29□□□□□ -1.56
SPG11-220ENST00000559933 RBM22Q9NW64 420 aaKnown RBP eCLIP5.29□□□□□ -1.568e-7■■■■■ 35
SPG11-220ENST00000559933 KIAA1522Q9P206 1035 aaPredicted RBP5.29□□□□□ -1.56
SPG11-220ENST00000559933 RNF14Q9UBS8 474 aa5.29□□□□□ -1.56
SPG11-220ENST00000559933 UBA2Q9UBT2 640 aaPredicted RBP5.29□□□□□ -1.56
SPG11-220ENST00000559933 PCYOX1Q9UHG3 505 aa5.29□□□□□ -1.56
SPG11-220ENST00000559933 RSPH14Q9UHP6 348 aa5.29□□□□□ -1.56
SPG11-220ENST00000559933 GPN3Q9UHW5 284 aaPredicted RBP5.29□□□□□ -1.56
SPG11-220ENST00000559933 SLCO3A1Q9UIG8 710 aa5.29□□□□□ -1.56
SPG11-220ENST00000559933 ZMYM5Q9UJ78 669 aa5.29□□□□□ -1.56
SPG11-220ENST00000559933 FBXO10Q9UK96 956 aa5.29□□□□□ -1.56
SPG11-220ENST00000559933 MTF2Q9Y483 593 aaPredicted RBP5.29□□□□□ -1.56
SPG11-220ENST00000559933 ACTL7BQ9Y614 415 aa5.29□□□□□ -1.56
SPG11-220ENST00000559933 RAD54BQ9Y620 910 aa5.29□□□□□ -1.56
SPG11-220ENST00000559933 PIAS3Q9Y6X2 628 aa5.29□□□□□ -1.56
SPG11-220ENST00000559933 ATG2BQ96BY7 2078 aa5.28□□□□□ -1.56
SPG11-220ENST00000559933 MYO10Q9HD67 2058 aa5.28□□□□□ -1.56
SPG11-220ENST00000559933 CACNA1GO43497 2377 aa5.28□□□□□ -1.56
SPG11-220ENST00000559933 UQCRHLA0A096LP55 91 aa5.28□□□□□ -1.56
SPG11-220ENST00000559933 CCDC78A2IDD5 438 aa5.28□□□□□ -1.56
SPG11-220ENST00000559933 TBC1D3BA6NDS4 549 aa5.28□□□□□ -1.56
SPG11-220ENST00000559933 K7EQS6 105 aa5.28□□□□□ -1.56
SPG11-220ENST00000559933 PLK4O00444 970 aa5.28□□□□□ -1.56
SPG11-220ENST00000559933 PAX4O43316 350 aa5.28□□□□□ -1.56
SPG11-220ENST00000559933 ZNF821O75541 412 aaPredicted RBP5.28□□□□□ -1.56
SPG11-220ENST00000559933 SEC31AO94979 1220 aaKnown RBP5.28□□□□□ -1.56
SPG11-220ENST00000559933 UQCRHP07919 91 aa5.28□□□□□ -1.56
SPG11-220ENST00000559933 F7P08709 466 aaPredicted RBP5.28□□□□□ -1.56
SPG11-220ENST00000559933 FAM153BP0C7A2 387 aa5.28□□□□□ -1.56
SPG11-220ENST00000559933 SRCP12931 536 aa5.28□□□□□ -1.56
SPG11-220ENST00000559933 FOSL1P15407 271 aa5.28□□□□□ -1.56
SPG11-220ENST00000559933 SPINK2P20155 84 aa5.28□□□□□ -1.56
SPG11-220ENST00000559933 CCNCP24863 283 aa5.28□□□□□ -1.56
SPG11-220ENST00000559933 IVDP26440 423 aa5.28□□□□□ -1.56
SPG11-220ENST00000559933 PLA2G5P39877 138 aa5.28□□□□□ -1.56
SPG11-220ENST00000559933 ADCY8P40145 1251 aa5.28□□□□□ -1.56
SPG11-220ENST00000559933 CD86P42081 329 aa5.28□□□□□ -1.56
SPG11-220ENST00000559933 IL12RB1P42701 662 aa5.28□□□□□ -1.56
SPG11-220ENST00000559933 SERPINH1P50454 418 aaKnown RBP5.28□□□□□ -1.56
SPG11-220ENST00000559933 GALK1P51570 392 aa5.28□□□□□ -1.56
SPG11-220ENST00000559933 ITGA8P53708 1063 aa5.28□□□□□ -1.56
SPG11-220ENST00000559933 YBEYP58557 167 aaPredicted RBP5.28□□□□□ -1.56
SPG11-220ENST00000559933 RHOAP61586 193 aa5.28□□□□□ -1.56
SPG11-220ENST00000559933 IFI35P80217 286 aaPredicted RBP5.28□□□□□ -1.56
SPG11-220ENST00000559933 ECT2LQ008S8 904 aa5.28□□□□□ -1.56
SPG11-220ENST00000559933 SEMG2Q02383 582 aa5.28□□□□□ -1.56
SPG11-220ENST00000559933 IL10RBQ08334 325 aa5.28□□□□□ -1.56
SPG11-220ENST00000559933 ITKQ08881 620 aa5.28□□□□□ -1.56
SPG11-220ENST00000559933 MTA1Q13330 715 aa5.28□□□□□ -1.56
SPG11-220ENST00000559933 XRCC4Q13426 336 aa5.28□□□□□ -1.56
SPG11-220ENST00000559933 DHX34Q14147 1143 aaKnown RBP5.28□□□□□ -1.56
SPG11-220ENST00000559933 ZNF234Q14588 700 aa5.28□□□□□ -1.56
SPG11-220ENST00000559933 ZNF235Q14590 738 aa5.28□□□□□ -1.56
SPG11-220ENST00000559933 FASTKD3Q14CZ7 662 aaKnown RBP5.28□□□□□ -1.56
SPG11-220ENST00000559933 FAM153CQ494X1 144 aa5.28□□□□□ -1.56
SPG11-220ENST00000559933 FNDC3BQ53EP0 1204 aaKnown RBP5.28□□□□□ -1.56
SPG11-220ENST00000559933 TEX44Q53QW1 395 aa5.28□□□□□ -1.56
SPG11-220ENST00000559933 DUPD1Q68J44 220 aa5.28□□□□□ -1.56
SPG11-220ENST00000559933 FSTL4Q6MZW2 842 aa5.28□□□□□ -1.56
SPG11-220ENST00000559933 TIGD7Q6NT04 549 aaPredicted RBP5.28□□□□□ -1.56
SPG11-220ENST00000559933 Q6ZS52 159 aa5.28□□□□□ -1.56
SPG11-220ENST00000559933 ARHGEF18Q6ZSZ5 1173 aa5.28□□□□□ -1.56
SPG11-220ENST00000559933 ZNF534Q76KX8 674 aa5.28□□□□□ -1.56
SPG11-220ENST00000559933 PID1Q7Z2X4 250 aa5.28□□□□□ -1.56
SPG11-220ENST00000559933 KIAA0907Q7Z7F0 614 aaPredicted RBP5.28□□□□□ -1.56
SPG11-220ENST00000559933 ZAR1Q86SH2 424 aa5.28□□□□□ -1.56
SPG11-220ENST00000559933 PRPF39Q86UA1 669 aaKnown RBP5.28□□□□□ -1.56
SPG11-220ENST00000559933 CCDC117Q8IWD4 279 aaPredicted RBP5.28□□□□□ -1.56
SPG11-220ENST00000559933 LZTR1Q8N653 840 aa5.28□□□□□ -1.56
SPG11-220ENST00000559933 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.28□□□□□ -1.56
SPG11-220ENST00000559933 ATP11CQ8NB49 1132 aa5.28□□□□□ -1.56
SPG11-220ENST00000559933 MYRIPQ8NFW9 859 aa5.28□□□□□ -1.56
SPG11-220ENST00000559933 ATL2Q8NHH9 583 aa5.28□□□□□ -1.56
SPG11-220ENST00000559933 ARRDC2Q8TBH0 407 aa5.28□□□□□ -1.56
SPG11-220ENST00000559933 GRIN3AQ8TCU5 1115 aa5.28□□□□□ -1.56
SPG11-220ENST00000559933 IFT81Q8WYA0 676 aa5.28□□□□□ -1.56
SPG11-220ENST00000559933 CPT1BQ92523 772 aa5.28□□□□□ -1.56
SPG11-220ENST00000559933 SLCO2A1Q92959 643 aa5.28□□□□□ -1.56
SPG11-220ENST00000559933 E2F7Q96AV8 911 aa5.28□□□□□ -1.56
SPG11-220ENST00000559933 VOPP1Q96AW1 172 aa5.28□□□□□ -1.56
SPG11-220ENST00000559933 RTP4Q96DX8 246 aa5.28□□□□□ -1.56
SPG11-220ENST00000559933 TSGA13Q96PP4 275 aa5.28□□□□□ -1.56
SPG11-220ENST00000559933 XPO6Q96QU8 1125 aaKnown RBP5.28□□□□□ -1.56
SPG11-220ENST00000559933 IL12RB2Q99665 862 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms