RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 SCUBE2Q9NQ36 999 aa16.66■□□□□ 0.26
TPM1-219ENST00000559397 DLGAP2Q9P1A6 1054 aa16.66■□□□□ 0.26
TPM1-219ENST00000559397 PI15O43692 258 aa16.65■□□□□ 0.26
TPM1-219ENST00000559397 SHOX2O60902 331 aaPredicted RBP16.65■□□□□ 0.26
TPM1-219ENST00000559397 USP12O75317 370 aa16.65■□□□□ 0.26
TPM1-219ENST00000559397 ALDH1A2O94788 518 aa16.65■□□□□ 0.26
TPM1-219ENST00000559397 CTSLP07711 333 aa16.65■□□□□ 0.26
TPM1-219ENST00000559397 CES1P23141 567 aa16.65■□□□□ 0.26
TPM1-219ENST00000559397 NPY2RP49146 381 aa16.65■□□□□ 0.26
TPM1-219ENST00000559397 ELAVL3Q14576 367 aaKnown RBP16.65■□□□□ 0.26
TPM1-219ENST00000559397 EFTUD2Q15029 972 aaKnown RBP eCLIP16.65■□□□□ 0.261e-5■■■□□ 16.7
TPM1-219ENST00000559397 SKIDA1Q1XH10 827 aa16.65■□□□□ 0.26
TPM1-219ENST00000559397 SYT13Q7L8C5 426 aa16.65■□□□□ 0.26
TPM1-219ENST00000559397 PRPF39Q86UA1 669 aaKnown RBP16.65■□□□□ 0.26
TPM1-219ENST00000559397 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.65■□□□□ 0.26
TPM1-219ENST00000559397 C2orf42Q9NWW7 574 aa16.65■□□□□ 0.26
TPM1-219ENST00000559397 SYBUQ9NX95 663 aa16.65■□□□□ 0.26
TPM1-219ENST00000559397 MOCS1Q9NZB8 636 aa16.65■□□□□ 0.26
TPM1-219ENST00000559397 UBP1Q9NZI7 540 aa16.65■□□□□ 0.26
TPM1-219ENST00000559397 PSMC3IPQ9P2W1 217 aaPredicted RBP16.65■□□□□ 0.26
TPM1-219ENST00000559397 ACTL7BQ9Y614 415 aa16.65■□□□□ 0.26
TPM1-219ENST00000559397 ANKRD36A6QL64 1941 aa16.65■□□□□ 0.26
TPM1-219ENST00000559397 A6NNZ2 444 aa16.65■□□□□ 0.26
TPM1-219ENST00000559397 SYNCRIPO60506 623 aaKnown RBP16.65■□□□□ 0.26
TPM1-219ENST00000559397 ATG13O75143 517 aa16.65■□□□□ 0.26
TPM1-219ENST00000559397 POP4O95707 220 aaKnown RBP16.65■□□□□ 0.26
TPM1-219ENST00000559397 MT-CYBP00156 380 aaPredicted RBP16.65■□□□□ 0.26
TPM1-219ENST00000559397 C7P10643 843 aa16.65■□□□□ 0.26
TPM1-219ENST00000559397 PGAM1P18669 254 aa16.65■□□□□ 0.26
TPM1-219ENST00000559397 AOC1P19801 751 aa16.65■□□□□ 0.26
TPM1-219ENST00000559397 ATP1A2P50993 1020 aa16.65■□□□□ 0.26
TPM1-219ENST00000559397 COPAP53621 1224 aa16.65■□□□□ 0.26
TPM1-219ENST00000559397 AP1S1P61966 158 aa16.65■□□□□ 0.26
TPM1-219ENST00000559397 STARD3Q14849 445 aa16.65■□□□□ 0.26
TPM1-219ENST00000559397 CRY1Q16526 586 aa16.65■□□□□ 0.26
TPM1-219ENST00000559397 TUBB8Q3ZCM7 444 aa16.65■□□□□ 0.26
TPM1-219ENST00000559397 KBTBD12Q3ZCT8 623 aa16.65■□□□□ 0.26
TPM1-219ENST00000559397 KDELC1Q6UW63 502 aa16.65■□□□□ 0.26
TPM1-219ENST00000559397 TAOK1Q7L7X3 1001 aa16.65■□□□□ 0.26
TPM1-219ENST00000559397 RYBPQ8N488 228 aaPredicted RBP16.65■□□□□ 0.26
TPM1-219ENST00000559397 DCAKDQ8WVC6 231 aa16.65■□□□□ 0.26
TPM1-219ENST00000559397 SLC44A1Q8WWI5 657 aa16.65■□□□□ 0.26
TPM1-219ENST00000559397 ERLEC1Q96DZ1 483 aa16.65■□□□□ 0.26
TPM1-219ENST00000559397 PAFAH2Q99487 392 aa16.65■□□□□ 0.26
TPM1-219ENST00000559397 HEPHQ9BQS7 1158 aa16.65■□□□□ 0.26
TPM1-219ENST00000559397 TRIM56Q9BRZ2 755 aaKnown RBP16.65■□□□□ 0.26
TPM1-219ENST00000559397 CPEB1Q9BZB8 566 aaKnown RBP16.65■□□□□ 0.26
TPM1-219ENST00000559397 CNOT10Q9H9A5 744 aaKnown RBP16.65■□□□□ 0.26
TPM1-219ENST00000559397 PIH1D1Q9NWS0 290 aaKnown RBP16.65■□□□□ 0.26
TPM1-219ENST00000559397 BFARQ9NZS9 450 aa16.65■□□□□ 0.26
TPM1-219ENST00000559397 WASF2Q9Y6W5 498 aa16.65■□□□□ 0.26
TPM1-219ENST00000559397 FAM159BA6NKW6 160 aa16.64■□□□□ 0.25
TPM1-219ENST00000559397 CD86P42081 329 aa16.64■□□□□ 0.25
TPM1-219ENST00000559397 MSH2P43246 934 aa16.64■□□□□ 0.25
TPM1-219ENST00000559397 MAPK8P45983 427 aa16.64■□□□□ 0.25
TPM1-219ENST00000559397 CLCN5P51795 746 aa16.64■□□□□ 0.25
TPM1-219ENST00000559397 CRADDP78560 199 aa16.64■□□□□ 0.25
TPM1-219ENST00000559397 CDH17Q12864 832 aa16.64■□□□□ 0.25
TPM1-219ENST00000559397 MPP3Q13368 585 aa16.64■□□□□ 0.25
TPM1-219ENST00000559397 FRG1Q14331 258 aaKnown RBP16.64■□□□□ 0.25
TPM1-219ENST00000559397 DENND5AQ6IQ26 1287 aa16.64■□□□□ 0.25
TPM1-219ENST00000559397 RANBP10Q6VN20 620 aa16.64■□□□□ 0.25
TPM1-219ENST00000559397 OR2T3Q8NH03 318 aa16.64■□□□□ 0.25
TPM1-219ENST00000559397 OR8D1Q8WZ84 308 aa16.64■□□□□ 0.25
TPM1-219ENST00000559397 MRGPRX2Q96LB1 330 aa16.64■□□□□ 0.25
TPM1-219ENST00000559397 TBL1YQ9BQ87 522 aa16.64■□□□□ 0.25
TPM1-219ENST00000559397 RSPH9Q9H1X1 276 aaPredicted RBP16.64■□□□□ 0.25
TPM1-219ENST00000559397 VPS45Q9NRW7 570 aa16.64■□□□□ 0.25
TPM1-219ENST00000559397 IL36AQ9UHA7 158 aa16.64■□□□□ 0.25
TPM1-219ENST00000559397 TBK1Q9UHD2 729 aa16.64■□□□□ 0.25
TPM1-219ENST00000559397 SARDHQ9UL12 918 aa16.64■□□□□ 0.25
TPM1-219ENST00000559397 PPM1HQ9ULR3 514 aa16.64■□□□□ 0.25
TPM1-219ENST00000559397 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.63■□□□□ 0.25
TPM1-219ENST00000559397 MAGEB16A2A368 324 aa16.63■□□□□ 0.25
TPM1-219ENST00000559397 LEFTY1O75610 366 aa16.63■□□□□ 0.25
TPM1-219ENST00000559397 PIGNO95427 931 aa16.63■□□□□ 0.25
TPM1-219ENST00000559397 SERPINF2P08697 491 aa16.63■□□□□ 0.25
TPM1-219ENST00000559397 MAGEA9P43362 315 aa16.63■□□□□ 0.25
TPM1-219ENST00000559397 RAD51Q06609 339 aa16.63■□□□□ 0.25
TPM1-219ENST00000559397 MTAPQ13126 283 aa16.63■□□□□ 0.25
TPM1-219ENST00000559397 TMED2Q15363 201 aa16.63■□□□□ 0.25
TPM1-219ENST00000559397 SLC14A2Q15849 920 aa16.63■□□□□ 0.25
TPM1-219ENST00000559397 ARSIQ5FYB1 569 aa16.63■□□□□ 0.25
TPM1-219ENST00000559397 CASC4Q6P4E1 433 aa16.63■□□□□ 0.25
TPM1-219ENST00000559397 ZNF449Q6P9G9 518 aa16.63■□□□□ 0.25
TPM1-219ENST00000559397 TRMT10BQ6PF06 316 aaKnown RBP16.63■□□□□ 0.25
TPM1-219ENST00000559397 TMEM135Q86UB9 458 aa16.63■□□□□ 0.25
TPM1-219ENST00000559397 TRABD2AQ86V40 505 aa16.63■□□□□ 0.25
TPM1-219ENST00000559397 SPEM1Q8N4L4 309 aa16.63■□□□□ 0.25
TPM1-219ENST00000559397 DNAAF3Q8N9W5 541 aa16.63■□□□□ 0.25
TPM1-219ENST00000559397 LRIG1Q96JA1 1093 aa16.63■□□□□ 0.25
TPM1-219ENST00000559397 TUBGCP5Q96RT8 1024 aa16.63■□□□□ 0.25
TPM1-219ENST00000559397 APOL2Q9BQE5 337 aa16.63■□□□□ 0.25
TPM1-219ENST00000559397 IER2Q9BTL4 223 aa16.63■□□□□ 0.25
TPM1-219ENST00000559397 COL25A1Q9BXS0 654 aaPredicted RBP16.63■□□□□ 0.25
TPM1-219ENST00000559397 CAPS2Q9BXY5 557 aa16.63■□□□□ 0.25
TPM1-219ENST00000559397 IL22Q9GZX6 179 aa16.63■□□□□ 0.25
TPM1-219ENST00000559397 MKRN2Q9H000 416 aaKnown RBP16.63■□□□□ 0.25
TPM1-219ENST00000559397 EPHX3Q9H6B9 360 aa16.63■□□□□ 0.25
TPM1-219ENST00000559397 ZDHHC6Q9H6R6 413 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms