RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 TMEM202A6NGA9 273 aa16.04■□□□□ 0.16
SCFD1-224ENST00000557713 LGALS16A8MUM7 142 aa16.04■□□□□ 0.16
SCFD1-224ENST00000557713 B8ZZF3 427 aa16.04■□□□□ 0.16
SCFD1-224ENST00000557713 NOBOXO60393 691 aa16.04■□□□□ 0.16
SCFD1-224ENST00000557713 PCCBP05166 539 aa16.04■□□□□ 0.16
SCFD1-224ENST00000557713 RPLP0P05388 317 aaKnown RBP16.04■□□□□ 0.16
SCFD1-224ENST00000557713 SLC5A2P31639 672 aa16.04■□□□□ 0.16
SCFD1-224ENST00000557713 CCKBRP32239 447 aa16.04■□□□□ 0.16
SCFD1-224ENST00000557713 INHBCP55103 352 aa16.04■□□□□ 0.16
SCFD1-224ENST00000557713 TPI1P60174 286 aa16.04■□□□□ 0.16
SCFD1-224ENST00000557713 RALGDSQ12967 914 aa16.04■□□□□ 0.16
SCFD1-224ENST00000557713 CA9Q16790 459 aa16.04■□□□□ 0.16
SCFD1-224ENST00000557713 AFMIDQ63HM1 303 aa16.04■□□□□ 0.16
SCFD1-224ENST00000557713 DCUN1D2Q6PH85 259 aa16.04■□□□□ 0.16
SCFD1-224ENST00000557713 RBM43Q6ZSC3 357 aaKnown RBP16.04■□□□□ 0.16
SCFD1-224ENST00000557713 OR1E3Q8WZA6 343 aa16.04■□□□□ 0.16
SCFD1-224ENST00000557713 FUBP1Q96AE4 644 aaKnown RBP16.04■□□□□ 0.16
SCFD1-224ENST00000557713 ECHDC3Q96DC8 303 aa16.04■□□□□ 0.16
SCFD1-224ENST00000557713 MED8Q96G25 268 aa16.04■□□□□ 0.16
SCFD1-224ENST00000557713 PDXPQ96GD0 296 aa16.04■□□□□ 0.16
SCFD1-224ENST00000557713 ERGIC2Q96RQ1 377 aa16.04■□□□□ 0.16
SCFD1-224ENST00000557713 CCNL2Q96S94 520 aaPredicted RBP16.04■□□□□ 0.16
SCFD1-224ENST00000557713 FOXP3Q9BZS1 431 aa16.04■□□□□ 0.16
SCFD1-224ENST00000557713 STRADBQ9C0K7 418 aa16.04■□□□□ 0.16
SCFD1-224ENST00000557713 ATP13A3Q9H7F0 1226 aa16.04■□□□□ 0.16
SCFD1-224ENST00000557713 LMBRD1Q9NUN5 540 aa16.04■□□□□ 0.16
SCFD1-224ENST00000557713 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.04■□□□□ 0.16
SCFD1-224ENST00000557713 APPL1Q9UKG1 709 aa16.04■□□□□ 0.16
SCFD1-224ENST00000557713 ACSL6Q9UKU0 697 aa16.04■□□□□ 0.16
SCFD1-224ENST00000557713 ATXN7L1Q9ULK2 861 aaPredicted RBP16.04■□□□□ 0.16
SCFD1-224ENST00000557713 ARHGAP42A6NI28 874 aa16.03■□□□□ 0.16
SCFD1-224ENST00000557713 RECQL5O94762 991 aaPredicted RBP16.03■□□□□ 0.16
SCFD1-224ENST00000557713 HOXC4P09017 264 aaPredicted RBP16.03■□□□□ 0.16
SCFD1-224ENST00000557713 GM2AP17900 193 aa16.03■□□□□ 0.16
SCFD1-224ENST00000557713 SERPINA4P29622 427 aa16.03■□□□□ 0.16
SCFD1-224ENST00000557713 TRIM23P36406 574 aa16.03■□□□□ 0.16
SCFD1-224ENST00000557713 KIAA1024LP59773 190 aa16.03■□□□□ 0.16
SCFD1-224ENST00000557713 UBXN1Q04323 297 aa16.03■□□□□ 0.16
SCFD1-224ENST00000557713 NSUN2Q08J23 767 aaKnown RBP eCLIP16.03■□□□□ 0.16
SCFD1-224ENST00000557713 ZSCAN23Q3MJ62 389 aa16.03■□□□□ 0.16
SCFD1-224ENST00000557713 CFAP58Q5T655 872 aa16.03■□□□□ 0.16
SCFD1-224ENST00000557713 LIPIQ6XZB0 460 aa16.03■□□□□ 0.16
SCFD1-224ENST00000557713 APTXQ7Z2E3 356 aaKnown RBP16.03■□□□□ 0.16
SCFD1-224ENST00000557713 IRF2BP2Q7Z5L9 587 aa16.03■□□□□ 0.16
SCFD1-224ENST00000557713 ARHGAP12Q8IWW6 846 aa16.03■□□□□ 0.16
SCFD1-224ENST00000557713 ARFGAP1Q8N6T3 406 aa16.03■□□□□ 0.16
SCFD1-224ENST00000557713 OR56A4Q8NGH8 313 aa16.03■□□□□ 0.16
SCFD1-224ENST00000557713 NSMCE3Q96MG7 304 aa16.03■□□□□ 0.16
SCFD1-224ENST00000557713 TMEM74Q96NL1 305 aa16.03■□□□□ 0.16
SCFD1-224ENST00000557713 SYT11Q9BT88 431 aa16.03■□□□□ 0.16
SCFD1-224ENST00000557713 AP4E1Q9UPM8 1137 aa16.03■□□□□ 0.16
SCFD1-224ENST00000557713 EIF3CLB5ME19 914 aaKnown RBP16.02■□□□□ 0.16
SCFD1-224ENST00000557713 EEF2KO00418 725 aaKnown RBP16.02■□□□□ 0.16
SCFD1-224ENST00000557713 TRAFD1O14545 582 aaPredicted RBP16.02■□□□□ 0.16
SCFD1-224ENST00000557713 TNFRSF10CO14798 259 aa16.02■□□□□ 0.16
SCFD1-224ENST00000557713 PALMO75781 387 aa16.02■□□□□ 0.16
SCFD1-224ENST00000557713 HGFP14210 728 aa16.02■□□□□ 0.16
SCFD1-224ENST00000557713 PNLIPP16233 465 aa16.02■□□□□ 0.16
SCFD1-224ENST00000557713 GLB1P16278 677 aa16.02■□□□□ 0.16
SCFD1-224ENST00000557713 FERP16591 822 aa16.02■□□□□ 0.16
SCFD1-224ENST00000557713 ZFP36L1Q07352 338 aaKnown RBP16.02■□□□□ 0.16
SCFD1-224ENST00000557713 MAMLD1Q13495 774 aa16.02■□□□□ 0.16
SCFD1-224ENST00000557713 CERCAMQ5T4B2 595 aa16.02■□□□□ 0.16
SCFD1-224ENST00000557713 ERMARDQ5T6L9 678 aa16.02■□□□□ 0.16
SCFD1-224ENST00000557713 CLEC17AQ6ZS10 378 aa16.02■□□□□ 0.16
SCFD1-224ENST00000557713 SFTPA2Q8IWL1 248 aa16.02■□□□□ 0.16
SCFD1-224ENST00000557713 Q8N9G6 341 aaPredicted RBP16.02■□□□□ 0.16
SCFD1-224ENST00000557713 FAM46DQ8NEK8 389 aa16.02■□□□□ 0.16
SCFD1-224ENST00000557713 EIF3CQ99613 913 aaKnown RBP16.02■□□□□ 0.16
SCFD1-224ENST00000557713 DHX35Q9H5Z1 703 aaKnown RBP16.02■□□□□ 0.16
SCFD1-224ENST00000557713 FGF22Q9HCT0 170 aa16.02■□□□□ 0.16
SCFD1-224ENST00000557713 MRPL40Q9NQ50 206 aaKnown RBP16.02■□□□□ 0.16
SCFD1-224ENST00000557713 TAS2R14Q9NYV8 317 aa16.02■□□□□ 0.16
SCFD1-224ENST00000557713 FLNBO75369 2602 aaKnown RBP16.01■□□□□ 0.15
SCFD1-224ENST00000557713 CACNB4O00305 520 aaPredicted RBP16.01■□□□□ 0.15
SCFD1-224ENST00000557713 NVLO15381 856 aaKnown RBP16.01■□□□□ 0.15
SCFD1-224ENST00000557713 ERCC2P18074 760 aa16.01■□□□□ 0.15
SCFD1-224ENST00000557713 KELP23276 732 aa16.01■□□□□ 0.15
SCFD1-224ENST00000557713 POLR2LP62875 67 aaKnown RBP16.01■□□□□ 0.15
SCFD1-224ENST00000557713 BCL2L1Q07817 233 aa16.01■□□□□ 0.15
SCFD1-224ENST00000557713 IL10RBQ08334 325 aa16.01■□□□□ 0.15
SCFD1-224ENST00000557713 RFTN1Q14699 578 aaPredicted RBP16.01■□□□□ 0.15
SCFD1-224ENST00000557713 TGIF1Q15583 401 aa16.01■□□□□ 0.15
SCFD1-224ENST00000557713 PLEKHA7Q6IQ23 1121 aa16.01■□□□□ 0.15
SCFD1-224ENST00000557713 ARHGAP36Q6ZRI8 547 aa16.01■□□□□ 0.15
SCFD1-224ENST00000557713 RFX8Q6ZV50 586 aa16.01■□□□□ 0.15
SCFD1-224ENST00000557713 DPPA4Q7L190 304 aa16.01■□□□□ 0.15
SCFD1-224ENST00000557713 TAF8Q7Z7C8 310 aa16.01■□□□□ 0.15
SCFD1-224ENST00000557713 CCNJLQ8IV13 435 aa16.01■□□□□ 0.15
SCFD1-224ENST00000557713 ANKRD20A12PQ8NF67 263 aa16.01■□□□□ 0.15
SCFD1-224ENST00000557713 PEBP4Q96S96 227 aa16.01■□□□□ 0.15
SCFD1-224ENST00000557713 KCTD15Q96SI1 283 aaPredicted RBP16.01■□□□□ 0.15
SCFD1-224ENST00000557713 LGR4Q9BXB1 951 aa16.01■□□□□ 0.15
SCFD1-224ENST00000557713 TMEM168Q9H0V1 697 aa16.01■□□□□ 0.15
SCFD1-224ENST00000557713 HSD3B7Q9H2F3 369 aa16.01■□□□□ 0.15
SCFD1-224ENST00000557713 PARVAQ9NVD7 372 aa16.01■□□□□ 0.15
SCFD1-224ENST00000557713 RNF215Q9Y6U7 377 aa16.01■□□□□ 0.15
SCFD1-224ENST00000557713 TMEM191CA6NGB0 347 aa16■□□□□ 0.15
SCFD1-224ENST00000557713 ELFN1P0C7U0 828 aa16■□□□□ 0.15
SCFD1-224ENST00000557713 CCDC172P0C7W6 258 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms