RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 ZNF420Q8TAQ5 688 aaPredicted RBP11.87□□□□□ -0.51
VIPAS39-211ENST00000557658 PHF21BQ96EK2 531 aa11.87□□□□□ -0.51
VIPAS39-211ENST00000557658 THAP11Q96EK4 314 aa11.87□□□□□ -0.51
VIPAS39-211ENST00000557658 TSPAN17Q96FV3 270 aa11.87□□□□□ -0.51
VIPAS39-211ENST00000557658 PPP1R2P1Q96PQ5 205 aa11.87□□□□□ -0.51
VIPAS39-211ENST00000557658 PRKD2Q9BZL6 878 aa11.87□□□□□ -0.51
VIPAS39-211ENST00000557658 FAM49AQ9H0Q0 323 aaPredicted RBP11.87□□□□□ -0.51
VIPAS39-211ENST00000557658 MROH8Q9H579 483 aa11.87□□□□□ -0.51
VIPAS39-211ENST00000557658 CXorf21Q9HAI6 301 aa11.87□□□□□ -0.51
VIPAS39-211ENST00000557658 ENTPD7Q9NQZ7 604 aa11.87□□□□□ -0.51
VIPAS39-211ENST00000557658 C8orf4Q9NR00 106 aa11.87□□□□□ -0.51
VIPAS39-211ENST00000557658 AGPAT4Q9NRZ5 378 aa11.87□□□□□ -0.51
VIPAS39-211ENST00000557658 TREX1Q9NSU2 369 aa11.87□□□□□ -0.51
VIPAS39-211ENST00000557658 NDUFAF1Q9Y375 327 aa11.87□□□□□ -0.51
VIPAS39-211ENST00000557658 TRIM64A6NGJ6 449 aa11.87□□□□□ -0.51
VIPAS39-211ENST00000557658 DFFAO00273 331 aa11.87□□□□□ -0.51
VIPAS39-211ENST00000557658 DLGAP1O14490 977 aa11.87□□□□□ -0.51
VIPAS39-211ENST00000557658 CBFA2T3O75081 653 aa11.87□□□□□ -0.51
VIPAS39-211ENST00000557658 CLASP2O75122 1294 aaKnown RBP11.87□□□□□ -0.51
VIPAS39-211ENST00000557658 MT-CO1P00395 513 aa11.87□□□□□ -0.51
VIPAS39-211ENST00000557658 KCNE1P15382 129 aa11.87□□□□□ -0.51
VIPAS39-211ENST00000557658 CXCR3P49682 368 aa11.87□□□□□ -0.51
VIPAS39-211ENST00000557658 CLCN5P51795 746 aa11.87□□□□□ -0.51
VIPAS39-211ENST00000557658 SOX4Q06945 474 aaPredicted RBP11.87□□□□□ -0.51
VIPAS39-211ENST00000557658 BNIP2Q12982 314 aa11.87□□□□□ -0.51
VIPAS39-211ENST00000557658 SEPT6Q14141 434 aa11.87□□□□□ -0.51
VIPAS39-211ENST00000557658 ACAP2Q15057 778 aa11.87□□□□□ -0.51
VIPAS39-211ENST00000557658 KIF19Q2TAC6 998 aa11.87□□□□□ -0.51
VIPAS39-211ENST00000557658 SLC36A3Q495N2 470 aa11.87□□□□□ -0.51
VIPAS39-211ENST00000557658 TAPT1Q6NXT6 567 aa11.87□□□□□ -0.51
VIPAS39-211ENST00000557658 FUNDC1Q8IVP5 155 aa11.87□□□□□ -0.51
VIPAS39-211ENST00000557658 ATPAF2Q8N5M1 289 aa11.87□□□□□ -0.51
VIPAS39-211ENST00000557658 GABPB2Q8TAK5 448 aaPredicted RBP11.87□□□□□ -0.51
VIPAS39-211ENST00000557658 FAM110BQ8TC76 370 aa11.87□□□□□ -0.51
VIPAS39-211ENST00000557658 SLC45A3Q96JT2 553 aa11.87□□□□□ -0.51
VIPAS39-211ENST00000557658 TSPAN18Q96SJ8 248 aa11.87□□□□□ -0.51
VIPAS39-211ENST00000557658 GPATCH1Q9BRR8 931 aaKnown RBP11.87□□□□□ -0.51
VIPAS39-211ENST00000557658 NPLQ9BXD5 320 aaPredicted RBP11.87□□□□□ -0.51
VIPAS39-211ENST00000557658 GSTO2Q9H4Y5 243 aa11.87□□□□□ -0.51
VIPAS39-211ENST00000557658 CD320Q9NPF0 282 aa11.87□□□□□ -0.51
VIPAS39-211ENST00000557658 GMPR2Q9P2T1 348 aaKnown RBP11.87□□□□□ -0.51
VIPAS39-211ENST00000557658 CDC14AQ9UNH5 594 aa11.87□□□□□ -0.51
VIPAS39-211ENST00000557658 TDRKHQ9Y2W6 561 aaKnown RBP11.87□□□□□ -0.51
VIPAS39-211ENST00000557658 ATP6AP2A0A1C7CYW4 349 aa11.86□□□□□ -0.51
VIPAS39-211ENST00000557658 NME4O00746 187 aa11.86□□□□□ -0.51
VIPAS39-211ENST00000557658 ATP6V1G1O75348 118 aa11.86□□□□□ -0.51
VIPAS39-211ENST00000557658 ATP6AP2O75787 350 aa11.86□□□□□ -0.51
VIPAS39-211ENST00000557658 SEC24DO94855 1032 aaPredicted RBP11.86□□□□□ -0.51
VIPAS39-211ENST00000557658 USP17L7P0C7H9 530 aa11.86□□□□□ -0.51
VIPAS39-211ENST00000557658 C7P10643 843 aa11.86□□□□□ -0.51
VIPAS39-211ENST00000557658 IMPDH1P20839 514 aa11.86□□□□□ -0.51
VIPAS39-211ENST00000557658 GPX3P22352 226 aa11.86□□□□□ -0.51
VIPAS39-211ENST00000557658 CTBSQ01459 385 aa11.86□□□□□ -0.51
VIPAS39-211ENST00000557658 ATP6AP1Q15904 470 aa11.86□□□□□ -0.51
VIPAS39-211ENST00000557658 CLEC6AQ6EIG7 209 aa11.86□□□□□ -0.51
VIPAS39-211ENST00000557658 PM20D1Q6GTS8 502 aa11.86□□□□□ -0.51
VIPAS39-211ENST00000557658 ELMSAN1Q6PJG2 1045 aa11.86□□□□□ -0.51
VIPAS39-211ENST00000557658 LYSMD3Q7Z3D4 306 aa11.86□□□□□ -0.51
VIPAS39-211ENST00000557658 RETREG3Q86VR2 466 aa11.86□□□□□ -0.51
VIPAS39-211ENST00000557658 SPPL2CQ8IUH8 684 aa11.86□□□□□ -0.51
VIPAS39-211ENST00000557658 EPHX4Q8IUS5 362 aa11.86□□□□□ -0.51
VIPAS39-211ENST00000557658 CALML6Q8TD86 181 aa11.86□□□□□ -0.51
VIPAS39-211ENST00000557658 GIPC3Q8TF64 312 aa11.86□□□□□ -0.51
VIPAS39-211ENST00000557658 SEPT8Q92599 483 aa11.86□□□□□ -0.51
VIPAS39-211ENST00000557658 BORCS5Q969J3 196 aa11.86□□□□□ -0.51
VIPAS39-211ENST00000557658 C19orf60Q96EN9 201 aa11.86□□□□□ -0.51
VIPAS39-211ENST00000557658 CENPNQ96H22 339 aaPredicted RBP11.86□□□□□ -0.51
VIPAS39-211ENST00000557658 VPS50Q96JG6 964 aa11.86□□□□□ -0.51
VIPAS39-211ENST00000557658 FEM1CQ96JP0 617 aa11.86□□□□□ -0.51
VIPAS39-211ENST00000557658 OSMRQ99650 979 aa11.86□□□□□ -0.51
VIPAS39-211ENST00000557658 OLFM1Q99784 485 aa11.86□□□□□ -0.51
VIPAS39-211ENST00000557658 FSD1LQ9BXM9 530 aa11.86□□□□□ -0.51
VIPAS39-211ENST00000557658 FBRSL1Q9HCM7 1045 aaKnown RBP11.86□□□□□ -0.51
VIPAS39-211ENST00000557658 ABCD2Q9UBJ2 740 aa11.86□□□□□ -0.51
VIPAS39-211ENST00000557658 SFMBT1Q9UHJ3 866 aa11.86□□□□□ -0.51
VIPAS39-211ENST00000557658 A0A0J9YYE9 177 aa11.86□□□□□ -0.51
VIPAS39-211ENST00000557658 FAM149AA5PLN7 773 aa11.86□□□□□ -0.51
VIPAS39-211ENST00000557658 NR5A2O00482 541 aa11.86□□□□□ -0.51
VIPAS39-211ENST00000557658 AURKAO14965 403 aa11.86□□□□□ -0.51
VIPAS39-211ENST00000557658 CLOCKO15516 846 aa11.86□□□□□ -0.51
VIPAS39-211ENST00000557658 SUPT7LO94864 414 aa11.86□□□□□ -0.51
VIPAS39-211ENST00000557658 HSD17B1P14061 328 aa11.86□□□□□ -0.51
VIPAS39-211ENST00000557658 ADRA1AP35348 466 aa11.86□□□□□ -0.51
VIPAS39-211ENST00000557658 RABGGTBP53611 331 aa11.86□□□□□ -0.51
VIPAS39-211ENST00000557658 SLC5A3P53794 718 aa11.86□□□□□ -0.51
VIPAS39-211ENST00000557658 CDC42EP1Q00587 391 aa11.86□□□□□ -0.51
VIPAS39-211ENST00000557658 EN1Q05925 392 aaPredicted RBP11.86□□□□□ -0.51
VIPAS39-211ENST00000557658 PCBP1Q15365 356 aaKnown RBP eCLIP11.86□□□□□ -0.51
VIPAS39-211ENST00000557658 WSCD1Q658N2 575 aa11.86□□□□□ -0.51
VIPAS39-211ENST00000557658 LCN8Q6JVE9 175 aa11.86□□□□□ -0.51
VIPAS39-211ENST00000557658 ABRAXAS1Q6UWZ7 409 aa11.86□□□□□ -0.51
VIPAS39-211ENST00000557658 ARHGAP36Q6ZRI8 547 aa11.86□□□□□ -0.51
VIPAS39-211ENST00000557658 CYGBQ8WWM9 190 aa11.86□□□□□ -0.51
VIPAS39-211ENST00000557658 RNF34Q969K3 372 aa11.86□□□□□ -0.51
VIPAS39-211ENST00000557658 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.86□□□□□ -0.51
VIPAS39-211ENST00000557658 EMID1Q96A84 441 aaPredicted RBP11.86□□□□□ -0.51
VIPAS39-211ENST00000557658 OTUD5Q96G74 571 aa11.86□□□□□ -0.51
VIPAS39-211ENST00000557658 IL12RB2Q99665 862 aa11.86□□□□□ -0.51
VIPAS39-211ENST00000557658 IL1RL2Q9HB29 575 aa11.86□□□□□ -0.51
VIPAS39-211ENST00000557658 ZNF711Q9Y462 761 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms