RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 NME7Q9Y5B8 376 aa1.78□□□□□ -2.12
HIF1A-212ENST00000557538 KCNE2Q9Y6J6 123 aa1.78□□□□□ -2.12
HIF1A-212ENST00000557538 TARSL2A2RTX5 802 aaKnown RBP1.78□□□□□ -2.13
HIF1A-212ENST00000557538 SYNDIG1LA6NDD5 238 aa1.78□□□□□ -2.13
HIF1A-212ENST00000557538 PAPSS1O43252 624 aaPredicted RBP1.78□□□□□ -2.13
HIF1A-212ENST00000557538 LIASO43766 372 aa1.78□□□□□ -2.13
HIF1A-212ENST00000557538 OAZ2O95190 189 aa1.78□□□□□ -2.13
HIF1A-212ENST00000557538 PGM3O95394 542 aa1.78□□□□□ -2.13
HIF1A-212ENST00000557538 CLDN7O95471 211 aa1.78□□□□□ -2.13
HIF1A-212ENST00000557538 HOXD9P28356 352 aaPredicted RBP1.78□□□□□ -2.13
HIF1A-212ENST00000557538 MAPK4P31152 587 aa1.78□□□□□ -2.13
HIF1A-212ENST00000557538 HOXD3P31249 432 aaPredicted RBP1.78□□□□□ -2.13
HIF1A-212ENST00000557538 ARL3P36405 182 aa1.78□□□□□ -2.13
HIF1A-212ENST00000557538 ANP32AP39687 249 aaKnown RBP1.78□□□□□ -2.13
HIF1A-212ENST00000557538 NR4A2P43354 598 aa1.78□□□□□ -2.13
HIF1A-212ENST00000557538 RFX2P48378 723 aa1.78□□□□□ -2.13
HIF1A-212ENST00000557538 PTH2RP49190 550 aa1.78□□□□□ -2.13
HIF1A-212ENST00000557538 ZNF132P52740 706 aa1.78□□□□□ -2.13
HIF1A-212ENST00000557538 EFNA5P52803 228 aa1.78□□□□□ -2.13
HIF1A-212ENST00000557538 CTAG1AP78358 180 aa1.78□□□□□ -2.13
HIF1A-212ENST00000557538 TFAP4Q01664 338 aa1.78□□□□□ -2.13
HIF1A-212ENST00000557538 TBCEQ15813 527 aaPredicted RBP1.78□□□□□ -2.13
HIF1A-212ENST00000557538 CCDC142Q17RM4 750 aa1.78□□□□□ -2.13
HIF1A-212ENST00000557538 EDRF1Q3B7T1 1238 aa1.78□□□□□ -2.13
HIF1A-212ENST00000557538 RAB41Q5JT25 222 aa1.78□□□□□ -2.13
HIF1A-212ENST00000557538 DAB2IPQ5VWQ8 1189 aa1.78□□□□□ -2.13
HIF1A-212ENST00000557538 CPLX2Q6PUV4 134 aaKnown RBP1.78□□□□□ -2.13
HIF1A-212ENST00000557538 YTHDF3Q7Z739 585 aaKnown RBP1.78□□□□□ -2.13
HIF1A-212ENST00000557538 CREBRFQ8IUR6 639 aa1.78□□□□□ -2.13
HIF1A-212ENST00000557538 SLC35F5Q8WV83 523 aa1.78□□□□□ -2.13
HIF1A-212ENST00000557538 INPP5DQ92835 1189 aa1.78□□□□□ -2.13
HIF1A-212ENST00000557538 FEM1CQ96JP0 617 aa1.78□□□□□ -2.13
HIF1A-212ENST00000557538 OR2A14Q96R47 310 aa1.78□□□□□ -2.13
HIF1A-212ENST00000557538 TEX13AQ9BXU3 409 aaPredicted RBP1.78□□□□□ -2.13
HIF1A-212ENST00000557538 DENND2DQ9H6A0 471 aaPredicted RBP1.78□□□□□ -2.13
HIF1A-212ENST00000557538 ACSL5Q9ULC5 683 aa1.78□□□□□ -2.13
HIF1A-212ENST00000557538 GPR34Q9UPC5 381 aa1.78□□□□□ -2.13
HIF1A-212ENST00000557538 WBP11Q9Y2W2 641 aaKnown RBP1.78□□□□□ -2.13
HIF1A-212ENST00000557538 ASTN2O75129 1339 aaPredicted RBP1.77□□□□□ -2.13
HIF1A-212ENST00000557538 IL16Q14005 1332 aa1.77□□□□□ -2.13
HIF1A-212ENST00000557538 A0A0U1RQJ8 604 aa1.77□□□□□ -2.13
HIF1A-212ENST00000557538 DVL1O14640 695 aa1.77□□□□□ -2.13
HIF1A-212ENST00000557538 DOK2O60496 412 aa1.77□□□□□ -2.13
HIF1A-212ENST00000557538 TACC1O75410 805 aa1.77□□□□□ -2.13
HIF1A-212ENST00000557538 IL1AP01583 271 aa1.77□□□□□ -2.13
HIF1A-212ENST00000557538 PRF1P14222 555 aa1.77□□□□□ -2.13
HIF1A-212ENST00000557538 ROR2Q01974 943 aaKnown RBP1.77□□□□□ -2.13
HIF1A-212ENST00000557538 TRAF2Q12933 501 aa1.77□□□□□ -2.13
HIF1A-212ENST00000557538 GAGE2BQ13066 116 aa1.77□□□□□ -2.13
HIF1A-212ENST00000557538 SOWAHAQ2M3V2 549 aa1.77□□□□□ -2.13
HIF1A-212ENST00000557538 GAGE2EQ4V326 116 aa1.77□□□□□ -2.13
HIF1A-212ENST00000557538 ESCO2Q56NI9 601 aa1.77□□□□□ -2.13
HIF1A-212ENST00000557538 FAM69BQ5VUD6 431 aa1.77□□□□□ -2.13
HIF1A-212ENST00000557538 TAF3Q5VWG9 929 aa1.77□□□□□ -2.13
HIF1A-212ENST00000557538 GAGE2AQ6NT46 116 aa1.77□□□□□ -2.13
HIF1A-212ENST00000557538 KLHL24Q6TFL4 600 aa1.77□□□□□ -2.13
HIF1A-212ENST00000557538 SYNE3Q6ZMZ3 975 aa1.77□□□□□ -2.13
HIF1A-212ENST00000557538 CFAP77Q6ZQR2 320 aa1.77□□□□□ -2.13
HIF1A-212ENST00000557538 TBC1D26Q86UD7 250 aa1.77□□□□□ -2.13
HIF1A-212ENST00000557538 DNAJC10Q8IXB1 793 aa1.77□□□□□ -2.13
HIF1A-212ENST00000557538 AGBL3Q8NEM8 1001 aa1.77□□□□□ -2.13
HIF1A-212ENST00000557538 CADM4Q8NFZ8 388 aa1.77□□□□□ -2.13
HIF1A-212ENST00000557538 WFIKKN2Q8TEU8 576 aa1.77□□□□□ -2.13
HIF1A-212ENST00000557538 RPL36ALQ969Q0 106 aaKnown RBP1.77□□□□□ -2.13
HIF1A-212ENST00000557538 CEP295NLQ96MC4 621 aa1.77□□□□□ -2.13
HIF1A-212ENST00000557538 POLR3CQ9BUI4 534 aaPredicted RBP1.77□□□□□ -2.13
HIF1A-212ENST00000557538 ALDH8A1Q9H2A2 487 aaPredicted RBP1.77□□□□□ -2.13
HIF1A-212ENST00000557538 CLK4Q9HAZ1 481 aaKnown RBP1.77□□□□□ -2.13
HIF1A-212ENST00000557538 ADARB2Q9NS39 739 aaKnown RBP1.77□□□□□ -2.13
HIF1A-212ENST00000557538 SIRT3Q9NTG7 399 aaPredicted RBP1.77□□□□□ -2.13
HIF1A-212ENST00000557538 CLIC5Q9NZA1 410 aa1.77□□□□□ -2.13
HIF1A-212ENST00000557538 SUCLA2Q9P2R7 463 aaPredicted RBP1.77□□□□□ -2.13
HIF1A-212ENST00000557538 C11orf21Q9P2W6 132 aa1.77□□□□□ -2.13
HIF1A-212ENST00000557538 GAGE2DQ9UEU5 116 aa1.77□□□□□ -2.13
HIF1A-212ENST00000557538 LOC100509620A0A075B734 347 aa1.77□□□□□ -2.13
HIF1A-212ENST00000557538 HTATSF1O43719 755 aaKnown RBP1.77□□□□□ -2.13
HIF1A-212ENST00000557538 ADRB2P07550 413 aa1.77□□□□□ -2.13
HIF1A-212ENST00000557538 PEPDP12955 493 aa1.77□□□□□ -2.13
HIF1A-212ENST00000557538 PSMA3P25788 255 aa1.77□□□□□ -2.13
HIF1A-212ENST00000557538 KLRC2P26717 231 aa1.77□□□□□ -2.13
HIF1A-212ENST00000557538 GGT5P36269 586 aa1.77□□□□□ -2.13
HIF1A-212ENST00000557538 AVPR1AP37288 418 aa1.77□□□□□ -2.13
HIF1A-212ENST00000557538 PIP4K2AP48426 406 aaPredicted RBP1.77□□□□□ -2.13
HIF1A-212ENST00000557538 COMPP49747 757 aaPredicted RBP1.77□□□□□ -2.13
HIF1A-212ENST00000557538 MRPS34P82930 218 aaKnown RBP1.77□□□□□ -2.13
HIF1A-212ENST00000557538 CREB5Q02930 508 aa1.77□□□□□ -2.13
HIF1A-212ENST00000557538 EGR4Q05215 589 aa1.77□□□□□ -2.13
HIF1A-212ENST00000557538 KRT32Q14532 448 aa1.77□□□□□ -2.13
HIF1A-212ENST00000557538 TCTN1Q2MV58 587 aa1.77□□□□□ -2.13
HIF1A-212ENST00000557538 ALDH1L2Q3SY69 923 aa1.77□□□□□ -2.13
HIF1A-212ENST00000557538 UBAP2Q5T6F2 1119 aaKnown RBP1.77□□□□□ -2.13
HIF1A-212ENST00000557538 MTSS1LQ765P7 747 aa1.77□□□□□ -2.13
HIF1A-212ENST00000557538 ZSCAN30Q86W11 494 aa1.77□□□□□ -2.13
HIF1A-212ENST00000557538 CCDC25Q86WR0 208 aa1.77□□□□□ -2.13
HIF1A-212ENST00000557538 GPSM1Q86YR5 675 aa1.77□□□□□ -2.13
HIF1A-212ENST00000557538 GHDCQ8N2G8 530 aa1.77□□□□□ -2.13
HIF1A-212ENST00000557538 LSMEM1Q8N8F7 131 aa1.77□□□□□ -2.13
HIF1A-212ENST00000557538 GDPD5Q8WTR4 605 aa1.77□□□□□ -2.13
HIF1A-212ENST00000557538 MMABQ96EY8 250 aaPredicted RBP1.77□□□□□ -2.13
HIF1A-212ENST00000557538 LRFN5Q96NI6 719 aa1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms