RNA–Protein interactions for RNA: ENST00000557033.1

HNRNPC-228, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-228ENST00000557033 UNGP13051 313 aaPredicted RBP10.04□□□□□ -0.8
HNRNPC-228ENST00000557033 DRD2P14416 443 aa10.04□□□□□ -0.8
HNRNPC-228ENST00000557033 SNRPBP14678 240 aaKnown RBP10.04□□□□□ -0.8
HNRNPC-228ENST00000557033 GOT1P17174 413 aa10.04□□□□□ -0.8
HNRNPC-228ENST00000557033 CHRNB2P17787 502 aa10.04□□□□□ -0.8
HNRNPC-228ENST00000557033 RDXP35241 583 aaKnown RBP10.04□□□□□ -0.8
HNRNPC-228ENST00000557033 KLK7P49862 253 aa10.04□□□□□ -0.8
HNRNPC-228ENST00000557033 GALCP54803 685 aa10.04□□□□□ -0.8
HNRNPC-228ENST00000557033 SESN3P58005 492 aa10.04□□□□□ -0.8
HNRNPC-228ENST00000557033 KRT83P78385 493 aa10.04□□□□□ -0.8
HNRNPC-228ENST00000557033 FMO1Q01740 532 aa10.04□□□□□ -0.8
HNRNPC-228ENST00000557033 UBXN1Q04323 297 aa10.04□□□□□ -0.8
HNRNPC-228ENST00000557033 SYCP1Q15431 976 aa10.04□□□□□ -0.8
HNRNPC-228ENST00000557033 TESK1Q15569 626 aa10.04□□□□□ -0.8
HNRNPC-228ENST00000557033 TMEM177Q53S58 311 aa10.04□□□□□ -0.8
HNRNPC-228ENST00000557033 FAM46CQ5VWP2 391 aa10.04□□□□□ -0.8
HNRNPC-228ENST00000557033 KIAA0895LQ68EN5 471 aa10.04□□□□□ -0.8
HNRNPC-228ENST00000557033 PGM2L1Q6PCE3 622 aa10.04□□□□□ -0.8
HNRNPC-228ENST00000557033 DBX2Q6ZNG2 339 aa10.04□□□□□ -0.8
HNRNPC-228ENST00000557033 DSG4Q86SJ6 1040 aa10.04□□□□□ -0.8
HNRNPC-228ENST00000557033 CIR1Q86X95 450 aaPredicted RBP10.04□□□□□ -0.8
HNRNPC-228ENST00000557033 PPIL6Q8IXY8 311 aa10.04□□□□□ -0.8
HNRNPC-228ENST00000557033 ZNF683Q8IZ20 524 aa10.04□□□□□ -0.8
HNRNPC-228ENST00000557033 CHST14Q8NCH0 376 aa10.04□□□□□ -0.8
HNRNPC-228ENST00000557033 OR2T34Q8NGX1 318 aa10.04□□□□□ -0.8
HNRNPC-228ENST00000557033 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.04□□□□□ -0.8
HNRNPC-228ENST00000557033 FRS2Q8WU20 508 aa10.04□□□□□ -0.8
HNRNPC-228ENST00000557033 ERGIC2Q96RQ1 377 aa10.04□□□□□ -0.8
HNRNPC-228ENST00000557033 NEUROG2Q9H2A3 272 aa10.04□□□□□ -0.8
HNRNPC-228ENST00000557033 GPR27Q9NS67 375 aa10.04□□□□□ -0.8
HNRNPC-228ENST00000557033 VPS28Q9UK41 221 aa10.04□□□□□ -0.8
HNRNPC-228ENST00000557033 PCDHGB2Q9Y5G2 931 aa10.04□□□□□ -0.8
HNRNPC-228ENST00000557033 GON4LQ3T8J9 2241 aa10.03□□□□□ -0.8
HNRNPC-228ENST00000557033 C10orf142B7Z368 130 aa10.03□□□□□ -0.8
HNRNPC-228ENST00000557033 GOLGA8SH3BPF8 625 aa10.03□□□□□ -0.8
HNRNPC-228ENST00000557033 I6L893 689 aaPredicted RBP10.03□□□□□ -0.8
HNRNPC-228ENST00000557033 MCF2LO15068 1137 aa10.03□□□□□ -0.8
HNRNPC-228ENST00000557033 EPHB6O15197 1021 aa10.03□□□□□ -0.8
HNRNPC-228ENST00000557033 ALOX15BO15296 676 aa10.03□□□□□ -0.8
HNRNPC-228ENST00000557033 SLC7A4O43246 635 aa10.03□□□□□ -0.8
HNRNPC-228ENST00000557033 DFNA5O60443 496 aa10.03□□□□□ -0.8
HNRNPC-228ENST00000557033 CNTN5O94779 1100 aa10.03□□□□□ -0.8
HNRNPC-228ENST00000557033 FSBPO95073 299 aa10.03□□□□□ -0.8
HNRNPC-228ENST00000557033 TRIM16O95361 564 aa10.03□□□□□ -0.8
HNRNPC-228ENST00000557033 IL1BP01584 269 aa10.03□□□□□ -0.8
HNRNPC-228ENST00000557033 THBDP07204 575 aa10.03□□□□□ -0.8
HNRNPC-228ENST00000557033 CCDC172P0C7W6 258 aa10.03□□□□□ -0.8
HNRNPC-228ENST00000557033 ETV3P41162 512 aa10.03□□□□□ -0.8
HNRNPC-228ENST00000557033 CSNK1EP49674 416 aaKnown RBP10.03□□□□□ -0.8
HNRNPC-228ENST00000557033 STK19P49842 368 aaPredicted RBP10.03□□□□□ -0.8
HNRNPC-228ENST00000557033 CCR5P51681 352 aa10.03□□□□□ -0.8
HNRNPC-228ENST00000557033 SLC20A2Q08357 652 aa10.03□□□□□ -0.8
HNRNPC-228ENST00000557033 DLG2Q15700 870 aa10.03□□□□□ -0.8
HNRNPC-228ENST00000557033 HLA-BQ31612 363 aa10.03□□□□□ -0.8
HNRNPC-228ENST00000557033 GRAMD1BQ3KR37 738 aa10.03□□□□□ -0.8
HNRNPC-228ENST00000557033 ARL13BQ3SXY8 428 aa10.03□□□□□ -0.8
HNRNPC-228ENST00000557033 ACCSLQ4AC99 568 aa10.03□□□□□ -0.8
HNRNPC-228ENST00000557033 ALFQ53S48 1182 aa10.03□□□□□ -0.8
HNRNPC-228ENST00000557033 INO80DQ53TQ3 878 aaPredicted RBP10.03□□□□□ -0.8
HNRNPC-228ENST00000557033 C2CD6Q53TS8 623 aa10.03□□□□□ -0.8
HNRNPC-228ENST00000557033 TRNP1Q6NT89 227 aa10.03□□□□□ -0.8
HNRNPC-228ENST00000557033 ZNF783Q6ZMS7 281 aa10.03□□□□□ -0.8
HNRNPC-228ENST00000557033 C1orf229Q6ZS94 237 aaPredicted RBP10.03□□□□□ -0.8
HNRNPC-228ENST00000557033 PHF13Q86YI8 300 aaPredicted RBP10.03□□□□□ -0.8
HNRNPC-228ENST00000557033 STK40Q8N2I9 435 aa10.03□□□□□ -0.8
HNRNPC-228ENST00000557033 DTWD1Q8N5C7 304 aa10.03□□□□□ -0.8
HNRNPC-228ENST00000557033 SH2D3CQ8N5H7 860 aa10.03□□□□□ -0.8
HNRNPC-228ENST00000557033 OR52K2Q8NGK3 314 aa10.03□□□□□ -0.8
HNRNPC-228ENST00000557033 OR2I1PQ8NGU4 316 aa10.03□□□□□ -0.8
HNRNPC-228ENST00000557033 SLC20A1Q8WUM9 679 aa10.03□□□□□ -0.8
HNRNPC-228ENST00000557033 OR8D1Q8WZ84 308 aa10.03□□□□□ -0.8
HNRNPC-228ENST00000557033 SNX19Q92543 992 aa10.03□□□□□ -0.8
HNRNPC-228ENST00000557033 FAM131CQ96AQ9 280 aa10.03□□□□□ -0.8
HNRNPC-228ENST00000557033 SKA1Q96BD8 255 aa10.03□□□□□ -0.8
HNRNPC-228ENST00000557033 CFAP57Q96MR6 1250 aa10.03□□□□□ -0.8
HNRNPC-228ENST00000557033 BPIFA3Q9BQP9 254 aa10.03□□□□□ -0.8
HNRNPC-228ENST00000557033 MCMBPQ9BTE3 642 aa10.03□□□□□ -0.8
HNRNPC-228ENST00000557033 GAREM1Q9H706 876 aa10.03□□□□□ -0.8
HNRNPC-228ENST00000557033 PPCSQ9HAB8 311 aa10.03□□□□□ -0.8
HNRNPC-228ENST00000557033 TM9SF3Q9HD45 589 aa10.03□□□□□ -0.8
HNRNPC-228ENST00000557033 PPARGC1AQ9UBK2 798 aaKnown RBP10.03□□□□□ -0.8
HNRNPC-228ENST00000557033 WASF3Q9UPY6 502 aa10.03□□□□□ -0.8
HNRNPC-228ENST00000557033 HS3ST2Q9Y278 367 aa10.03□□□□□ -0.8
HNRNPC-228ENST00000557033 ST14Q9Y5Y6 855 aa10.03□□□□□ -0.8
HNRNPC-228ENST00000557033 CXorf51AA0A1B0GTR3 108 aa10.02□□□□□ -0.81
HNRNPC-228ENST00000557033 A0A1B0GVT2 93 aa10.02□□□□□ -0.81
HNRNPC-228ENST00000557033 A0A1W2PPC4 97 aa10.02□□□□□ -0.81
HNRNPC-228ENST00000557033 ILVBLA1L0T0 632 aa10.02□□□□□ -0.81
HNRNPC-228ENST00000557033 FAM47DPA6NHR8 397 aa10.02□□□□□ -0.81
HNRNPC-228ENST00000557033 SMTNL1A8MU46 457 aa10.02□□□□□ -0.81
HNRNPC-228ENST00000557033 E9PAM4 449 aa10.02□□□□□ -0.81
HNRNPC-228ENST00000557033 C1QTNF3-AMACRE9PGA6 284 aa10.02□□□□□ -0.81
HNRNPC-228ENST00000557033 VILLO15195 856 aa10.02□□□□□ -0.81
HNRNPC-228ENST00000557033 NRDCO43847 1150 aa10.02□□□□□ -0.81
HNRNPC-228ENST00000557033 PCDHGA12O60330 932 aa10.02□□□□□ -0.81
HNRNPC-228ENST00000557033 SRGAP2O75044 1071 aa10.02□□□□□ -0.81
HNRNPC-228ENST00000557033 WISP1O95388 367 aa10.02□□□□□ -0.81
HNRNPC-228ENST00000557033 IGHV4-34P06331 123 aa10.02□□□□□ -0.81
HNRNPC-228ENST00000557033 RHOCP08134 193 aa10.02□□□□□ -0.81
HNRNPC-228ENST00000557033 KRT3P12035 628 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms