RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 C15orf59Q2T9L4 293 aaPredicted RBP9.09□□□□□ -0.95
HNRNPC-227ENST00000556897 AMZ1Q400G9 498 aa9.09□□□□□ -0.95
HNRNPC-227ENST00000556897 CCDC14Q49A88 953 aa9.09□□□□□ -0.95
HNRNPC-227ENST00000556897 BORAQ6PGQ7 559 aa9.09□□□□□ -0.95
HNRNPC-227ENST00000556897 ARCQ7LC44 396 aa9.09□□□□□ -0.95
HNRNPC-227ENST00000556897 PIM3Q86V86 326 aa9.09□□□□□ -0.95
HNRNPC-227ENST00000556897 IRF2BP1Q8IU81 584 aa9.09□□□□□ -0.95
HNRNPC-227ENST00000556897 CCDC185Q8N715 623 aa9.09□□□□□ -0.95
HNRNPC-227ENST00000556897 PLA2G15Q8NCC3 412 aa9.09□□□□□ -0.95
HNRNPC-227ENST00000556897 RCBTB1Q8NDN9 531 aa9.09□□□□□ -0.95
HNRNPC-227ENST00000556897 CCL4L1Q8NHW4 92 aa9.09□□□□□ -0.95
HNRNPC-227ENST00000556897 GPT2Q8TD30 523 aa9.09□□□□□ -0.95
HNRNPC-227ENST00000556897 CPA5Q8WXQ8 436 aa9.09□□□□□ -0.95
HNRNPC-227ENST00000556897 NKD1Q969G9 470 aa9.09□□□□□ -0.95
HNRNPC-227ENST00000556897 PMEPA1Q969W9 287 aa9.09□□□□□ -0.95
HNRNPC-227ENST00000556897 TBC1D31Q96DN5 1066 aa9.09□□□□□ -0.95
HNRNPC-227ENST00000556897 NCAPGQ9BPX3 1015 aa9.09□□□□□ -0.95
HNRNPC-227ENST00000556897 KLC2Q9H0B6 622 aa9.09□□□□□ -0.95
HNRNPC-227ENST00000556897 TMEM168Q9H0V1 697 aa9.09□□□□□ -0.95
HNRNPC-227ENST00000556897 ADNPQ9H2P0 1102 aa9.09□□□□□ -0.95
HNRNPC-227ENST00000556897 RETREG1Q9H6L5 497 aa9.09□□□□□ -0.95
HNRNPC-227ENST00000556897 NOL6Q9H6R4 1146 aaKnown RBP9.09□□□□□ -0.95
HNRNPC-227ENST00000556897 METTL5Q9NRN9 209 aaKnown RBP9.09□□□□□ -0.95
HNRNPC-227ENST00000556897 DAAM1Q9Y4D1 1078 aa9.09□□□□□ -0.95
HNRNPC-227ENST00000556897 TSPAN11A1L157 253 aa9.08□□□□□ -0.96
HNRNPC-227ENST00000556897 CACNB4O00305 520 aaPredicted RBP9.08□□□□□ -0.96
HNRNPC-227ENST00000556897 B4GAT1O43505 415 aa9.08□□□□□ -0.96
HNRNPC-227ENST00000556897 LSM8O95777 96 aaKnown RBP9.08□□□□□ -0.96
HNRNPC-227ENST00000556897 PLEKP08567 350 aaPredicted RBP9.08□□□□□ -0.96
HNRNPC-227ENST00000556897 GP1BBP13224 206 aa9.08□□□□□ -0.96
HNRNPC-227ENST00000556897 ALDH4A1P30038 563 aa9.08□□□□□ -0.96
HNRNPC-227ENST00000556897 SDC4P31431 198 aa9.08□□□□□ -0.96
HNRNPC-227ENST00000556897 MMP12P39900 470 aa9.08□□□□□ -0.96
HNRNPC-227ENST00000556897 MTIF2P46199 727 aaKnown RBP9.08□□□□□ -0.96
HNRNPC-227ENST00000556897 ATP1A2P50993 1020 aa9.08□□□□□ -0.96
HNRNPC-227ENST00000556897 ARSDP51689 593 aa9.08□□□□□ -0.96
HNRNPC-227ENST00000556897 OR1D5P58170 312 aa9.08□□□□□ -0.96
HNRNPC-227ENST00000556897 B4GALNT1Q00973 533 aa9.08□□□□□ -0.96
HNRNPC-227ENST00000556897 KCNAB2Q13303 367 aa9.08□□□□□ -0.96
HNRNPC-227ENST00000556897 MTM1Q13496 603 aa9.08□□□□□ -0.96
HNRNPC-227ENST00000556897 INO80DQ53TQ3 878 aaPredicted RBP9.08□□□□□ -0.96
HNRNPC-227ENST00000556897 EFHC2Q5JST6 749 aa9.08□□□□□ -0.96
HNRNPC-227ENST00000556897 NAA35Q5VZE5 725 aa9.08□□□□□ -0.96
HNRNPC-227ENST00000556897 SPECC1LQ69YQ0 1117 aa9.08□□□□□ -0.96
HNRNPC-227ENST00000556897 ERAP2Q6P179 960 aa9.08□□□□□ -0.96
HNRNPC-227ENST00000556897 PHLDB2Q86SQ0 1253 aa9.08□□□□□ -0.96
HNRNPC-227ENST00000556897 NOP9Q86U38 636 aaKnown RBP9.08□□□□□ -0.96
HNRNPC-227ENST00000556897 ZSWIM9Q86XI8 627 aa9.08□□□□□ -0.96
HNRNPC-227ENST00000556897 CAMK1DQ8IU85 385 aa9.08□□□□□ -0.96
HNRNPC-227ENST00000556897 IL22RA1Q8N6P7 574 aa9.08□□□□□ -0.96
HNRNPC-227ENST00000556897 MSANTD4Q8NCY6 345 aa9.08□□□□□ -0.96
HNRNPC-227ENST00000556897 OR56A4Q8NGH8 313 aa9.08□□□□□ -0.96
HNRNPC-227ENST00000556897 RXFP2Q8WXD0 754 aa9.08□□□□□ -0.96
HNRNPC-227ENST00000556897 CASKIN2Q8WXE0 1202 aa9.08□□□□□ -0.96
HNRNPC-227ENST00000556897 FUBP1Q96AE4 644 aaKnown RBP9.08□□□□□ -0.96
HNRNPC-227ENST00000556897 NUDT22Q9BRQ3 303 aa9.08□□□□□ -0.96
HNRNPC-227ENST00000556897 B3GNT4Q9C0J1 378 aa9.08□□□□□ -0.96
HNRNPC-227ENST00000556897 SUV39H2Q9H5I1 410 aa9.08□□□□□ -0.96
HNRNPC-227ENST00000556897 CYP4F12Q9HCS2 524 aa9.08□□□□□ -0.96
HNRNPC-227ENST00000556897 AKAP7Q9P0M2 348 aaPredicted RBP9.08□□□□□ -0.96
HNRNPC-227ENST00000556897 LHX3Q9UBR4 397 aa9.08□□□□□ -0.96
HNRNPC-227ENST00000556897 RWDD2AQ9UIY3 292 aa9.08□□□□□ -0.96
HNRNPC-227ENST00000556897 ATP8A1Q9Y2Q0 1164 aa9.08□□□□□ -0.96
HNRNPC-227ENST00000556897 TEX15Q9BXT5 2789 aa9.08□□□□□ -0.96
HNRNPC-227ENST00000556897 USP9XQ93008 2570 aaPredicted RBP9.08□□□□□ -0.96
HNRNPC-227ENST00000556897 ANKRD36A6QL64 1941 aa9.07□□□□□ -0.96
HNRNPC-227ENST00000556897 IGHV5-10-1A0A0J9YXX1 117 aa9.07□□□□□ -0.96
HNRNPC-227ENST00000556897 HGSO14964 777 aaPredicted RBP9.07□□□□□ -0.96
HNRNPC-227ENST00000556897 ATMINO43313 823 aaPredicted RBP9.07□□□□□ -0.96
HNRNPC-227ENST00000556897 BUB1BO60566 1050 aaPredicted RBP9.07□□□□□ -0.96
HNRNPC-227ENST00000556897 RECQL5O94762 991 aaPredicted RBP9.07□□□□□ -0.96
HNRNPC-227ENST00000556897 MMEP08473 750 aa9.07□□□□□ -0.96
HNRNPC-227ENST00000556897 FGF3P11487 239 aaPredicted RBP9.07□□□□□ -0.96
HNRNPC-227ENST00000556897 LIFP15018 202 aa9.07□□□□□ -0.96
HNRNPC-227ENST00000556897 CR2P20023 1033 aa9.07□□□□□ -0.96
HNRNPC-227ENST00000556897 KELP23276 732 aa9.07□□□□□ -0.96
HNRNPC-227ENST00000556897 EPHB2P29323 1055 aa9.07□□□□□ -0.96
HNRNPC-227ENST00000556897 UGT1A3P35503 534 aa9.07□□□□□ -0.96
HNRNPC-227ENST00000556897 CASRP41180 1078 aa9.07□□□□□ -0.96
HNRNPC-227ENST00000556897 CCR10P46092 362 aa9.07□□□□□ -0.96
HNRNPC-227ENST00000556897 MAZP56270 477 aaKnown RBP9.07□□□□□ -0.96
HNRNPC-227ENST00000556897 HDAC4P56524 1084 aa9.07□□□□□ -0.96
HNRNPC-227ENST00000556897 KIAA1024LP59773 190 aa9.07□□□□□ -0.96
HNRNPC-227ENST00000556897 NOMO3P69849 1222 aa9.07□□□□□ -0.96
HNRNPC-227ENST00000556897 FOXK1P85037 733 aa9.07□□□□□ -0.96
HNRNPC-227ENST00000556897 AGERQ15109 404 aa9.07□□□□□ -0.96
HNRNPC-227ENST00000556897 CYTH1Q15438 398 aa9.07□□□□□ -0.96
HNRNPC-227ENST00000556897 PPP1R15BQ5SWA1 713 aa9.07□□□□□ -0.96
HNRNPC-227ENST00000556897 CFAP58Q5T655 872 aa9.07□□□□□ -0.96
HNRNPC-227ENST00000556897 DPY19L2P1Q6NXN4 242 aa9.07□□□□□ -0.96
HNRNPC-227ENST00000556897 BRAT1Q6PJG6 821 aa9.07□□□□□ -0.96
HNRNPC-227ENST00000556897 DNAAF5Q86Y56 855 aa9.07□□□□□ -0.96
HNRNPC-227ENST00000556897 PYROXD2Q8N2H3 581 aa9.07□□□□□ -0.96
HNRNPC-227ENST00000556897 RTL3Q8N8U3 475 aaKnown RBP9.07□□□□□ -0.96
HNRNPC-227ENST00000556897 JOSD2Q8TAC2 188 aa9.07□□□□□ -0.96
HNRNPC-227ENST00000556897 HCAR2Q8TDS4 363 aa9.07□□□□□ -0.96
HNRNPC-227ENST00000556897 CCDC74BQ96LY2 380 aa9.07□□□□□ -0.96
HNRNPC-227ENST00000556897 ZNF641Q96N77 438 aaPredicted RBP9.07□□□□□ -0.96
HNRNPC-227ENST00000556897 LGR4Q9BXB1 951 aa9.07□□□□□ -0.96
HNRNPC-227ENST00000556897 SUDS3Q9H7L9 328 aaPredicted RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms