RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 OR1E3Q8WZA6 343 aa11.96□□□□□ -0.49
ACTN1-221ENST00000556571 ZNF641Q96N77 438 aaPredicted RBP11.96□□□□□ -0.49
ACTN1-221ENST00000556571 SLC12A9Q9BXP2 914 aa11.96□□□□□ -0.49
ACTN1-221ENST00000556571 MAGEB5Q9BZ81 275 aa11.96□□□□□ -0.49
ACTN1-221ENST00000556571 SEMA6CQ9H3T2 930 aa11.96□□□□□ -0.49
ACTN1-221ENST00000556571 DPEP2Q9H4A9 486 aa11.96□□□□□ -0.49
ACTN1-221ENST00000556571 NOL6Q9H6R4 1146 aaKnown RBP11.96□□□□□ -0.49
ACTN1-221ENST00000556571 USP9YO00507 2555 aaPredicted RBP11.95□□□□□ -0.5
ACTN1-221ENST00000556571 TMEM202A6NGA9 273 aa11.95□□□□□ -0.5
ACTN1-221ENST00000556571 B4DGG1 531 aa11.95□□□□□ -0.5
ACTN1-221ENST00000556571 GOLGA6L22H0YM25 854 aa11.95□□□□□ -0.5
ACTN1-221ENST00000556571 HGSO14964 777 aaPredicted RBP11.95□□□□□ -0.5
ACTN1-221ENST00000556571 HOXC4P09017 264 aaPredicted RBP11.95□□□□□ -0.5
ACTN1-221ENST00000556571 PRKCSHP14314 528 aaPredicted RBP11.95□□□□□ -0.5
ACTN1-221ENST00000556571 EPHB2P29323 1055 aa11.95□□□□□ -0.5
ACTN1-221ENST00000556571 MMP12P39900 470 aa11.95□□□□□ -0.5
ACTN1-221ENST00000556571 SERINC3Q13530 473 aa11.95□□□□□ -0.5
ACTN1-221ENST00000556571 UBAP2LQ14157 1087 aaKnown RBP11.95□□□□□ -0.5
ACTN1-221ENST00000556571 C16orf72Q14CZ0 275 aa11.95□□□□□ -0.5
ACTN1-221ENST00000556571 CYTH1Q15438 398 aa11.95□□□□□ -0.5
ACTN1-221ENST00000556571 PARP15Q460N3 678 aa11.95□□□□□ -0.5
ACTN1-221ENST00000556571 MAP9Q49MG5 647 aa11.95□□□□□ -0.5
ACTN1-221ENST00000556571 CFAP58Q5T655 872 aa11.95□□□□□ -0.5
ACTN1-221ENST00000556571 SPECC1LQ69YQ0 1117 aa11.95□□□□□ -0.5
ACTN1-221ENST00000556571 NOP9Q86U38 636 aaKnown RBP11.95□□□□□ -0.5
ACTN1-221ENST00000556571 LURAP1LQ8IV03 231 aa11.95□□□□□ -0.5
ACTN1-221ENST00000556571 RTL3Q8N8U3 475 aaKnown RBP11.95□□□□□ -0.5
ACTN1-221ENST00000556571 PLA2G15Q8NCC3 412 aa11.95□□□□□ -0.5
ACTN1-221ENST00000556571 ZNF564Q8TBZ8 553 aaPredicted RBP11.95□□□□□ -0.5
ACTN1-221ENST00000556571 KIAA1524Q8TCG1 905 aa11.95□□□□□ -0.5
ACTN1-221ENST00000556571 GPT2Q8TD30 523 aa11.95□□□□□ -0.5
ACTN1-221ENST00000556571 CENPIQ92674 756 aaPredicted RBP11.95□□□□□ -0.5
ACTN1-221ENST00000556571 NTAN1Q96AB6 310 aa11.95□□□□□ -0.5
ACTN1-221ENST00000556571 FUBP1Q96AE4 644 aaKnown RBP11.95□□□□□ -0.5
ACTN1-221ENST00000556571 TAAR9Q96RI9 348 aa11.95□□□□□ -0.5
ACTN1-221ENST00000556571 KLC2Q9H0B6 622 aa11.95□□□□□ -0.5
ACTN1-221ENST00000556571 TMEM168Q9H0V1 697 aa11.95□□□□□ -0.5
ACTN1-221ENST00000556571 NDST4Q9H3R1 872 aa11.95□□□□□ -0.5
ACTN1-221ENST00000556571 FGF22Q9HCT0 170 aa11.95□□□□□ -0.5
ACTN1-221ENST00000556571 LHX3Q9UBR4 397 aa11.95□□□□□ -0.5
ACTN1-221ENST00000556571 TUBD1Q9UJT1 453 aa11.95□□□□□ -0.5
ACTN1-221ENST00000556571 ATP8A1Q9Y2Q0 1164 aa11.95□□□□□ -0.5
ACTN1-221ENST00000556571 PCDHGA3Q9Y5H0 932 aa11.95□□□□□ -0.5
ACTN1-221ENST00000556571 CHD5Q8TDI0 1954 aa11.95□□□□□ -0.5
ACTN1-221ENST00000556571 SCN8AQ9UQD0 1980 aa11.94□□□□□ -0.5
ACTN1-221ENST00000556571 C2CD4BA6NLJ0 364 aa11.94□□□□□ -0.5
ACTN1-221ENST00000556571 RASA4BC9J798 803 aa11.94□□□□□ -0.5
ACTN1-221ENST00000556571 PDE2AO00408 941 aaPredicted RBP11.94□□□□□ -0.5
ACTN1-221ENST00000556571 RASA4O43374 803 aa11.94□□□□□ -0.5
ACTN1-221ENST00000556571 B4GAT1O43505 415 aa11.94□□□□□ -0.5
ACTN1-221ENST00000556571 RECQL5O94762 991 aaPredicted RBP11.94□□□□□ -0.5
ACTN1-221ENST00000556571 MMEP08473 750 aa11.94□□□□□ -0.5
ACTN1-221ENST00000556571 CCL4P13236 92 aa11.94□□□□□ -0.5
ACTN1-221ENST00000556571 MMP8P22894 467 aa11.94□□□□□ -0.5
ACTN1-221ENST00000556571 TRIM23P36406 574 aa11.94□□□□□ -0.5
ACTN1-221ENST00000556571 STAT1P42224 750 aa11.94□□□□□ -0.5
ACTN1-221ENST00000556571 HDAC4P56524 1084 aa11.94□□□□□ -0.5
ACTN1-221ENST00000556571 KCNAB2Q13303 367 aa11.94□□□□□ -0.5
ACTN1-221ENST00000556571 TPD52L1Q16890 204 aaPredicted RBP11.94□□□□□ -0.5
ACTN1-221ENST00000556571 TSR1Q2NL82 804 aaKnown RBP11.94□□□□□ -0.5
ACTN1-221ENST00000556571 AMZ1Q400G9 498 aa11.94□□□□□ -0.5
ACTN1-221ENST00000556571 VWA3BQ502W6 1294 aa11.94□□□□□ -0.5
ACTN1-221ENST00000556571 EFHC2Q5JST6 749 aa11.94□□□□□ -0.5
ACTN1-221ENST00000556571 KLHDC7AQ5VTJ3 777 aa11.94□□□□□ -0.5
ACTN1-221ENST00000556571 SLFN11Q7Z7L1 901 aa11.94□□□□□ -0.5
ACTN1-221ENST00000556571 ZNF677Q86XU0 584 aa11.94□□□□□ -0.5
ACTN1-221ENST00000556571 PTRH1Q86Y79 214 aaKnown RBP11.94□□□□□ -0.5
ACTN1-221ENST00000556571 FAM114A1Q8IWE2 563 aa11.94□□□□□ -0.5
ACTN1-221ENST00000556571 SFTPA2Q8IWL1 248 aa11.94□□□□□ -0.5
ACTN1-221ENST00000556571 CCDC185Q8N715 623 aa11.94□□□□□ -0.5
ACTN1-221ENST00000556571 GPBAR1Q8TDU6 330 aa11.94□□□□□ -0.5
ACTN1-221ENST00000556571 JPH3Q8WXH2 748 aaPredicted RBP11.94□□□□□ -0.5
ACTN1-221ENST00000556571 NKD1Q969G9 470 aa11.94□□□□□ -0.5
ACTN1-221ENST00000556571 EXOC2Q96KP1 924 aa11.94□□□□□ -0.5
ACTN1-221ENST00000556571 TUBGCP5Q96RT8 1024 aa11.94□□□□□ -0.5
ACTN1-221ENST00000556571 NAA15Q9BXJ9 866 aaKnown RBP11.94□□□□□ -0.5
ACTN1-221ENST00000556571 STK33Q9BYT3 514 aa11.94□□□□□ -0.5
ACTN1-221ENST00000556571 CDH19Q9H159 772 aa11.94□□□□□ -0.5
ACTN1-221ENST00000556571 RDH14Q9HBH5 336 aa11.94□□□□□ -0.5
ACTN1-221ENST00000556571 CYP4F12Q9HCS2 524 aa11.94□□□□□ -0.5
ACTN1-221ENST00000556571 MRPL40Q9NQ50 206 aaKnown RBP11.94□□□□□ -0.5
ACTN1-221ENST00000556571 KIAA1468Q9P260 1216 aa11.94□□□□□ -0.5
ACTN1-221ENST00000556571 UBA2Q9UBT2 640 aaPredicted RBP11.94□□□□□ -0.5
ACTN1-221ENST00000556571 FHOD1Q9Y613 1164 aa11.94□□□□□ -0.5
ACTN1-221ENST00000556571 RHPN2P1A8MT19 583 aa11.93□□□□□ -0.5
ACTN1-221ENST00000556571 WASH4PA8MWX3 477 aa11.93□□□□□ -0.5
ACTN1-221ENST00000556571 BUB1BO60566 1050 aaPredicted RBP11.93□□□□□ -0.5
ACTN1-221ENST00000556571 CYP1A1P04798 512 aaPredicted RBP11.93□□□□□ -0.5
ACTN1-221ENST00000556571 GP1BBP13224 206 aa11.93□□□□□ -0.5
ACTN1-221ENST00000556571 UCHL3P15374 230 aa11.93□□□□□ -0.5
ACTN1-221ENST00000556571 ALDH4A1P30038 563 aa11.93□□□□□ -0.5
ACTN1-221ENST00000556571 CCR10P46092 362 aa11.93□□□□□ -0.5
ACTN1-221ENST00000556571 POLE2P56282 527 aa11.93□□□□□ -0.5
ACTN1-221ENST00000556571 OR1D5P58170 312 aa11.93□□□□□ -0.5
ACTN1-221ENST00000556571 TRA2AQ13595 282 aaKnown RBP eCLIP11.93□□□□□ -0.5
ACTN1-221ENST00000556571 CAMK4Q16566 473 aa11.93□□□□□ -0.5
ACTN1-221ENST00000556571 ZNF438Q7Z4V0 828 aa11.93□□□□□ -0.5
ACTN1-221ENST00000556571 PHLDB2Q86SQ0 1253 aa11.93□□□□□ -0.5
ACTN1-221ENST00000556571 C17orf82Q86X59 251 aaPredicted RBP11.93□□□□□ -0.5
ACTN1-221ENST00000556571 CAMK1DQ8IU85 385 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms