RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 OLFM1Q99784 485 aa18.4■□□□□ 0.54
SDR39U1-220ENST00000556548 MFSD1Q9H3U5 465 aa18.4■□□□□ 0.54
SDR39U1-220ENST00000556548 TLR9Q9NR96 1032 aa18.4■□□□□ 0.54
SDR39U1-220ENST00000556548 FNDC3AQ9Y2H6 1198 aaKnown RBP18.4■□□□□ 0.54
SDR39U1-220ENST00000556548 ACOT9Q9Y305 439 aa18.4■□□□□ 0.54
SDR39U1-220ENST00000556548 SLC7A4O43246 635 aa18.39■□□□□ 0.53
SDR39U1-220ENST00000556548 BMP1P13497 986 aa18.39■□□□□ 0.53
SDR39U1-220ENST00000556548 TARSP26639 723 aaKnown RBP18.39■□□□□ 0.53
SDR39U1-220ENST00000556548 SERPINB3P29508 390 aa18.39■□□□□ 0.53
SDR39U1-220ENST00000556548 ABL2P42684 1182 aa18.39■□□□□ 0.53
SDR39U1-220ENST00000556548 RHOAP61586 193 aa18.39■□□□□ 0.53
SDR39U1-220ENST00000556548 KIF2BQ8N4N8 673 aa18.39■□□□□ 0.53
SDR39U1-220ENST00000556548 EFHBQ8N7U6 833 aa18.39■□□□□ 0.53
SDR39U1-220ENST00000556548 MDGA1Q8NFP4 955 aa18.39■□□□□ 0.53
SDR39U1-220ENST00000556548 RAB3IL1Q8TBN0 382 aa18.39■□□□□ 0.53
SDR39U1-220ENST00000556548 ALG14Q96F25 216 aa18.39■□□□□ 0.53
SDR39U1-220ENST00000556548 TSNARE1Q96NA8 513 aa18.39■□□□□ 0.53
SDR39U1-220ENST00000556548 NUDCD1Q96RS6 583 aa18.39■□□□□ 0.53
SDR39U1-220ENST00000556548 MAN1C1Q9NR34 630 aa18.39■□□□□ 0.53
SDR39U1-220ENST00000556548 LHX3Q9UBR4 397 aa18.39■□□□□ 0.53
SDR39U1-220ENST00000556548 ZFP69BQ9UJL9 534 aa18.39■□□□□ 0.53
SDR39U1-220ENST00000556548 DNAJC16Q9Y2G8 782 aa18.39■□□□□ 0.53
SDR39U1-220ENST00000556548 C5orf42Q9H799 3197 aa18.39■□□□□ 0.53
SDR39U1-220ENST00000556548 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.39■□□□□ 0.53
SDR39U1-220ENST00000556548 PER2O15055 1255 aa18.39■□□□□ 0.53
SDR39U1-220ENST00000556548 SMAD6O43541 496 aaKnown RBP18.39■□□□□ 0.53
SDR39U1-220ENST00000556548 IL1BP01584 269 aa18.39■□□□□ 0.53
SDR39U1-220ENST00000556548 SERPINE1P05121 402 aa18.39■□□□□ 0.53
SDR39U1-220ENST00000556548 CALRP27797 417 aaKnown RBP18.39■□□□□ 0.53
SDR39U1-220ENST00000556548 LEPRP48357 1165 aaKnown RBP18.39■□□□□ 0.53
SDR39U1-220ENST00000556548 AQP5P55064 265 aa18.39■□□□□ 0.53
SDR39U1-220ENST00000556548 NTHL1P78549 312 aa18.39■□□□□ 0.53
SDR39U1-220ENST00000556548 ZBTB16Q05516 673 aa18.39■□□□□ 0.53
SDR39U1-220ENST00000556548 TRAF2Q12933 501 aa18.39■□□□□ 0.53
SDR39U1-220ENST00000556548 TEAD2Q15562 447 aa18.39■□□□□ 0.53
SDR39U1-220ENST00000556548 NAPRTQ6XQN6 538 aa18.39■□□□□ 0.53
SDR39U1-220ENST00000556548 GLT6D1Q7Z4J2 308 aa18.39■□□□□ 0.53
SDR39U1-220ENST00000556548 RIN3Q8TB24 985 aa18.39■□□□□ 0.53
SDR39U1-220ENST00000556548 SHKBP1Q8TBC3 707 aa18.39■□□□□ 0.53
SDR39U1-220ENST00000556548 SP7Q8TDD2 431 aaPredicted RBP18.39■□□□□ 0.53
SDR39U1-220ENST00000556548 SH3RF2Q8TEC5 729 aa18.39■□□□□ 0.53
SDR39U1-220ENST00000556548 MTF2Q9Y483 593 aaPredicted RBP18.39■□□□□ 0.53
SDR39U1-220ENST00000556548 LINC01553A4QN01 128 aa18.38■□□□□ 0.53
SDR39U1-220ENST00000556548 GRXCR1A8MXD5 290 aa18.38■□□□□ 0.53
SDR39U1-220ENST00000556548 EPCAMP16422 314 aa18.38■□□□□ 0.53
SDR39U1-220ENST00000556548 CD70P32970 193 aa18.38■□□□□ 0.53
SDR39U1-220ENST00000556548 CCDC15Q0P6D6 951 aa18.38■□□□□ 0.53
SDR39U1-220ENST00000556548 SEMA3AQ14563 771 aa18.38■□□□□ 0.53
SDR39U1-220ENST00000556548 HSF5Q4G112 596 aaPredicted RBP18.38■□□□□ 0.53
SDR39U1-220ENST00000556548 ZNF783Q6ZMS7 281 aa18.38■□□□□ 0.53
SDR39U1-220ENST00000556548 KIAA0408Q6ZU52 694 aa18.38■□□□□ 0.53
SDR39U1-220ENST00000556548 TBC1D1Q86TI0 1168 aaPredicted RBP18.38■□□□□ 0.53
SDR39U1-220ENST00000556548 ALYREFQ86V81 257 aaKnown RBP18.38■□□□□ 0.53
SDR39U1-220ENST00000556548 FAM217AQ8IXS0 508 aa18.38■□□□□ 0.53
SDR39U1-220ENST00000556548 CMTM8Q8IZV2 173 aa18.38■□□□□ 0.53
SDR39U1-220ENST00000556548 FSTL5Q8N475 847 aaPredicted RBP18.38■□□□□ 0.53
SDR39U1-220ENST00000556548 ZNF398Q8TD17 642 aa18.38■□□□□ 0.53
SDR39U1-220ENST00000556548 DNMT3BQ9UBC3 853 aaKnown RBP18.38■□□□□ 0.53
SDR39U1-220ENST00000556548 ANKRD6Q9Y2G4 727 aa18.38■□□□□ 0.53
SDR39U1-220ENST00000556548 IRAK3Q9Y616 596 aa18.38■□□□□ 0.53
SDR39U1-220ENST00000556548 GRM6O15303 877 aa18.38■□□□□ 0.53
SDR39U1-220ENST00000556548 CBX6O95503 412 aa18.38■□□□□ 0.53
SDR39U1-220ENST00000556548 GLP2RO95838 553 aa18.38■□□□□ 0.53
SDR39U1-220ENST00000556548 S1PR4O95977 384 aa18.38■□□□□ 0.53
SDR39U1-220ENST00000556548 LMAN2Q12907 356 aa18.38■□□□□ 0.53
SDR39U1-220ENST00000556548 OR4K2Q8NGD2 314 aa18.38■□□□□ 0.53
SDR39U1-220ENST00000556548 HERVK_113Q902F9 699 aa18.38■□□□□ 0.53
SDR39U1-220ENST00000556548 FAM136AQ96C01 138 aa18.38■□□□□ 0.53
SDR39U1-220ENST00000556548 SGF29Q96ES7 293 aa18.38■□□□□ 0.53
SDR39U1-220ENST00000556548 BPIFA1Q9NP55 256 aa18.38■□□□□ 0.53
SDR39U1-220ENST00000556548 PNPOQ9NVS9 261 aa18.38■□□□□ 0.53
SDR39U1-220ENST00000556548 HAO1Q9UJM8 370 aa18.38■□□□□ 0.53
SDR39U1-220ENST00000556548 CD3EAPO15446 510 aaKnown RBP18.37■□□□□ 0.53
SDR39U1-220ENST00000556548 RPP40O75818 363 aaKnown RBP18.37■□□□□ 0.53
SDR39U1-220ENST00000556548 SBK3P0C264 359 aa18.37■□□□□ 0.53
SDR39U1-220ENST00000556548 GKP32189 559 aa18.37■□□□□ 0.53
SDR39U1-220ENST00000556548 SLC5A9Q2M3M2 681 aa18.37■□□□□ 0.53
SDR39U1-220ENST00000556548 TTC7BQ86TV6 843 aa18.37■□□□□ 0.53
SDR39U1-220ENST00000556548 TMEM151AQ8N4L1 468 aa18.37■□□□□ 0.53
SDR39U1-220ENST00000556548 AGR3Q8TD06 166 aa18.37■□□□□ 0.53
SDR39U1-220ENST00000556548 RPL10LQ96L21 214 aaKnown RBP18.37■□□□□ 0.53
SDR39U1-220ENST00000556548 TMEM237Q96Q45 408 aa18.37■□□□□ 0.53
SDR39U1-220ENST00000556548 XPR1Q9UBH6 696 aa18.37■□□□□ 0.53
SDR39U1-220ENST00000556548 DNAJC8O75937 253 aaPredicted RBP18.37■□□□□ 0.53
SDR39U1-220ENST00000556548 CRABP2P29373 138 aa18.37■□□□□ 0.53
SDR39U1-220ENST00000556548 POU4F1Q01851 419 aa18.37■□□□□ 0.53
SDR39U1-220ENST00000556548 CAMK1Q14012 370 aa18.37■□□□□ 0.53
SDR39U1-220ENST00000556548 CSHL1Q14406 222 aa18.37■□□□□ 0.53
SDR39U1-220ENST00000556548 HECTD2Q5U5R9 776 aa18.37■□□□□ 0.53
SDR39U1-220ENST00000556548 LRRC8EQ6NSJ5 796 aa18.37■□□□□ 0.53
SDR39U1-220ENST00000556548 NCEH1Q6PIU2 408 aa18.37■□□□□ 0.53
SDR39U1-220ENST00000556548 RBM23Q86U06 439 aaKnown RBP18.37■□□□□ 0.53
SDR39U1-220ENST00000556548 GABPB2Q8TAK5 448 aaPredicted RBP18.37■□□□□ 0.53
SDR39U1-220ENST00000556548 STYXQ8WUJ0 223 aa18.37■□□□□ 0.53
SDR39U1-220ENST00000556548 HEXDCQ8WVB3 486 aa18.37■□□□□ 0.53
SDR39U1-220ENST00000556548 CDKN2AIPNLQ96HQ2 116 aa18.37■□□□□ 0.53
SDR39U1-220ENST00000556548 SORT1Q99523 831 aa18.37■□□□□ 0.53
SDR39U1-220ENST00000556548 EBF4Q9BQW3 602 aa18.37■□□□□ 0.53
SDR39U1-220ENST00000556548 PCDHB9Q9Y5E1 797 aa18.37■□□□□ 0.53
SDR39U1-220ENST00000556548 CRTAMO95727 393 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms