RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 MEI1Q5TIA1 1274 aa9.72□□□□□ -0.85
SRP54-210ENST00000556380 DESI1Q6ICB0 168 aa9.72□□□□□ -0.85
SRP54-210ENST00000556380 KIAA1161Q6NSJ0 714 aa9.72□□□□□ -0.85
SRP54-210ENST00000556380 CBARPQ8N350 705 aaPredicted RBP9.72□□□□□ -0.85
SRP54-210ENST00000556380 UBL4BQ8N7F7 174 aa9.72□□□□□ -0.85
SRP54-210ENST00000556380 ACTL9Q8TC94 416 aa9.72□□□□□ -0.85
SRP54-210ENST00000556380 TFB1MQ8WVM0 346 aaKnown RBP9.72□□□□□ -0.85
SRP54-210ENST00000556380 SNX19Q92543 992 aa9.72□□□□□ -0.85
SRP54-210ENST00000556380 P3H4Q92791 437 aa9.72□□□□□ -0.85
SRP54-210ENST00000556380 KLK6Q92876 244 aa9.72□□□□□ -0.85
SRP54-210ENST00000556380 SERAC1Q96JX3 654 aa9.72□□□□□ -0.85
SRP54-210ENST00000556380 TEKT5Q96M29 485 aa9.72□□□□□ -0.85
SRP54-210ENST00000556380 QKIQ96PU8 341 aaKnown RBP eCLIP9.72□□□□□ -0.854e-9■■■■■ 35.8
SRP54-210ENST00000556380 LENG8Q96PV6 779 aaPredicted RBP9.72□□□□□ -0.85
SRP54-210ENST00000556380 KLF6Q99612 283 aaPredicted RBP9.72□□□□□ -0.85
SRP54-210ENST00000556380 POLR1EQ9GZS1 481 aaKnown RBP9.72□□□□□ -0.85
SRP54-210ENST00000556380 LZTFL1Q9NQ48 299 aa9.72□□□□□ -0.85
SRP54-210ENST00000556380 PPIL1Q9Y3C6 166 aa9.72□□□□□ -0.85
SRP54-210ENST00000556380 PCDH15Q96QU1 1955 aa9.72□□□□□ -0.85
SRP54-210ENST00000556380 ASCC3Q8N3C0 2202 aaKnown RBP9.71□□□□□ -0.85
SRP54-210ENST00000556380 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.71□□□□□ -0.86
SRP54-210ENST00000556380 A0A1B0GVT2 93 aa9.71□□□□□ -0.86
SRP54-210ENST00000556380 A0A1W2PQ67 120 aa9.71□□□□□ -0.86
SRP54-210ENST00000556380 TCRBV7S2A1N4TA0A589 114 aa9.71□□□□□ -0.86
SRP54-210ENST00000556380 HACD1B0YJ81 288 aa9.71□□□□□ -0.86
SRP54-210ENST00000556380 PRAMEF26H0Y7S4 382 aa9.71□□□□□ -0.86
SRP54-210ENST00000556380 RAD51BO15315 384 aa9.71□□□□□ -0.86
SRP54-210ENST00000556380 TJP3O95049 919 aa9.71□□□□□ -0.86
SRP54-210ENST00000556380 PRKCGP05129 697 aa9.71□□□□□ -0.86
SRP54-210ENST00000556380 CFIP05156 583 aa9.71□□□□□ -0.86
SRP54-210ENST00000556380 PDHA1P08559 390 aa9.71□□□□□ -0.86
SRP54-210ENST00000556380 PRLRP16471 622 aa9.71□□□□□ -0.86
SRP54-210ENST00000556380 CD68P34810 354 aaPredicted RBP9.71□□□□□ -0.86
SRP54-210ENST00000556380 MMP12P39900 470 aa9.71□□□□□ -0.86
SRP54-210ENST00000556380 CTSKP43235 329 aa9.71□□□□□ -0.86
SRP54-210ENST00000556380 GRIA4P48058 902 aa9.71□□□□□ -0.86
SRP54-210ENST00000556380 OTUD4Q01804 1114 aaKnown RBP9.71□□□□□ -0.86
SRP54-210ENST00000556380 RALGDSQ12967 914 aa9.71□□□□□ -0.86
SRP54-210ENST00000556380 GRIK2Q13002 908 aa9.71□□□□□ -0.86
SRP54-210ENST00000556380 KIF19Q2TAC6 998 aa9.71□□□□□ -0.86
SRP54-210ENST00000556380 SETMARQ53H47 684 aaPredicted RBP9.71□□□□□ -0.86
SRP54-210ENST00000556380 SLC45A4Q5BKX6 768 aa9.71□□□□□ -0.86
SRP54-210ENST00000556380 STPG1Q5TH74 334 aa9.71□□□□□ -0.86
SRP54-210ENST00000556380 NAPEPLDQ6IQ20 393 aa9.71□□□□□ -0.86
SRP54-210ENST00000556380 LAYNQ6UX15 382 aa9.71□□□□□ -0.86
SRP54-210ENST00000556380 ZSCAN30Q86W11 494 aa9.71□□□□□ -0.86
SRP54-210ENST00000556380 MFSD2AQ8NA29 543 aa9.71□□□□□ -0.86
SRP54-210ENST00000556380 C12orf50Q8NA57 414 aaPredicted RBP9.71□□□□□ -0.86
SRP54-210ENST00000556380 PIH1D2Q8WWB5 315 aa9.71□□□□□ -0.86
SRP54-210ENST00000556380 HAUS1Q96CS2 278 aa9.71□□□□□ -0.86
SRP54-210ENST00000556380 BMFQ96LC9 184 aa9.71□□□□□ -0.86
SRP54-210ENST00000556380 TLR10Q9BXR5 811 aa9.71□□□□□ -0.86
SRP54-210ENST00000556380 NUSAP1Q9BXS6 441 aaKnown RBP9.71□□□□□ -0.86
SRP54-210ENST00000556380 SLC17A9Q9BYT1 436 aa9.71□□□□□ -0.86
SRP54-210ENST00000556380 ZDHHC5Q9C0B5 715 aa9.71□□□□□ -0.86
SRP54-210ENST00000556380 SLC25A51Q9H1U9 297 aa9.71□□□□□ -0.86
SRP54-210ENST00000556380 USP29Q9HBJ7 922 aa9.71□□□□□ -0.86
SRP54-210ENST00000556380 DLL3Q9NYJ7 618 aa9.71□□□□□ -0.86
SRP54-210ENST00000556380 PHTF1Q9UMS5 762 aa9.71□□□□□ -0.86
SRP54-210ENST00000556380 ANKRD6Q9Y2G4 727 aa9.71□□□□□ -0.86
SRP54-210ENST00000556380 RAI2Q9Y5P3 530 aa9.71□□□□□ -0.86
SRP54-210ENST00000556380 HS3ST3A1Q9Y663 406 aa9.71□□□□□ -0.86
SRP54-210ENST00000556380 DOCK9Q9BZ29 2069 aa9.71□□□□□ -0.86
SRP54-210ENST00000556380 TRPM6Q9BX84 2022 aa9.7□□□□□ -0.86
SRP54-210ENST00000556380 CFAP69A5D8W1 941 aa9.7□□□□□ -0.86
SRP54-210ENST00000556380 C4orf47A7E2U8 309 aa9.7□□□□□ -0.86
SRP54-210ENST00000556380 SLC30A4O14863 429 aa9.7□□□□□ -0.86
SRP54-210ENST00000556380 SLC31A1O15431 190 aa9.7□□□□□ -0.86
SRP54-210ENST00000556380 MMP20O60882 483 aa9.7□□□□□ -0.86
SRP54-210ENST00000556380 PAK4O96013 591 aaPredicted RBP9.7□□□□□ -0.86
SRP54-210ENST00000556380 SYPP08247 313 aa9.7□□□□□ -0.86
SRP54-210ENST00000556380 GM2AP17900 193 aa9.7□□□□□ -0.86
SRP54-210ENST00000556380 HNRNPA2B1P22626 353 aaKnown RBP9.7□□□□□ -0.86
SRP54-210ENST00000556380 CD38P28907 300 aa9.7□□□□□ -0.86
SRP54-210ENST00000556380 CETN2P41208 172 aa9.7□□□□□ -0.86
SRP54-210ENST00000556380 LIG3P49916 1009 aa9.7□□□□□ -0.86
SRP54-210ENST00000556380 POLR2LP62875 67 aaKnown RBP9.7□□□□□ -0.86
SRP54-210ENST00000556380 SEMG2Q02383 582 aa9.7□□□□□ -0.86
SRP54-210ENST00000556380 ITKQ08881 620 aa9.7□□□□□ -0.86
SRP54-210ENST00000556380 ELP6Q0PNE2 266 aa9.7□□□□□ -0.86
SRP54-210ENST00000556380 AGERQ15109 404 aa9.7□□□□□ -0.86
SRP54-210ENST00000556380 PTPRRQ15256 657 aa9.7□□□□□ -0.86
SRP54-210ENST00000556380 RPS6KA1Q15418 735 aa9.7□□□□□ -0.86
SRP54-210ENST00000556380 RSPO4Q2I0M5 234 aaPredicted RBP9.7□□□□□ -0.86
SRP54-210ENST00000556380 LINC01559Q495D7 138 aa9.7□□□□□ -0.86
SRP54-210ENST00000556380 AASDHQ4L235 1098 aaPredicted RBP9.7□□□□□ -0.86
SRP54-210ENST00000556380 LCE2AQ5TA79 106 aaPredicted RBP9.7□□□□□ -0.86
SRP54-210ENST00000556380 GCNT7Q6ZNI0 430 aa9.7□□□□□ -0.86
SRP54-210ENST00000556380 DPPA4Q7L190 304 aa9.7□□□□□ -0.86
SRP54-210ENST00000556380 ABI3BPQ7Z7G0 1075 aa9.7□□□□□ -0.86
SRP54-210ENST00000556380 ZC3H18Q86VM9 953 aaKnown RBP9.7□□□□□ -0.86
SRP54-210ENST00000556380 IQCHQ86VS3 1027 aa9.7□□□□□ -0.86
SRP54-210ENST00000556380 TRIM58Q8NG06 486 aa9.7□□□□□ -0.86
SRP54-210ENST00000556380 OR2I1PQ8NGU4 316 aa9.7□□□□□ -0.86
SRP54-210ENST00000556380 NETO1Q8TDF5 533 aa9.7□□□□□ -0.86
SRP54-210ENST00000556380 HTR3CQ8WXA8 447 aa9.7□□□□□ -0.86
SRP54-210ENST00000556380 CENPTQ96BT3 561 aa9.7□□□□□ -0.86
SRP54-210ENST00000556380 RMDN1Q96DB5 314 aa9.7□□□□□ -0.86
SRP54-210ENST00000556380 SCRN2Q96FV2 425 aa9.7□□□□□ -0.86
SRP54-210ENST00000556380 IMP4Q96G21 291 aaKnown RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms