RNA–Protein interactions for RNA: ENST00000555904.1

ABCD4-223, Transcript of ATP binding cassette subfamily D member 4, human

TSL 3

Gene ABCD4, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCD4-223	ENST00000555904	FAM126A	Q9BYI3	521 aa	Predicted RBP	12.57	□□□□□ -0.4
ABCD4-223	ENST00000555904	NEUROG2	Q9H2A3	272 aa		12.57	□□□□□ -0.4
ABCD4-223	ENST00000555904	KDM4C	Q9H3R0	1056 aa		12.57	□□□□□ -0.4
ABCD4-223	ENST00000555904	TRABD	Q9H4I3	376 aa		12.57	□□□□□ -0.4
ABCD4-223	ENST00000555904	ARNT2	Q9HBZ2	717 aa		12.57	□□□□□ -0.4
ABCD4-223	ENST00000555904	MAGEE1	Q9HCI5	957 aa		12.57	□□□□□ -0.4
ABCD4-223	ENST00000555904	BFAR	Q9NZS9	450 aa		12.57	□□□□□ -0.4
ABCD4-223	ENST00000555904	SAMD15	Q9P1V8	674 aa		12.57	□□□□□ -0.4
ABCD4-223	ENST00000555904	MTRF1L	Q9UGC7	380 aa	Known RBP	12.57	□□□□□ -0.4
ABCD4-223	ENST00000555904	SERGEF	Q9UGK8	458 aa		12.57	□□□□□ -0.4
ABCD4-223	ENST00000555904	CYP8B1	Q9UNU6	501 aa		12.57	□□□□□ -0.4
ABCD4-223	ENST00000555904	CKAP5	Q14008	2032 aa		12.57	□□□□□ -0.4
ABCD4-223	ENST00000555904	TBC1D3D	A0A087WVF3	549 aa		12.56	□□□□□ -0.4
ABCD4-223	ENST00000555904	TBC1D3I	A0A087WXS9	549 aa		12.56	□□□□□ -0.4
ABCD4-223	ENST00000555904	TBC1D3E	A0A087X179	549 aa		12.56	□□□□□ -0.4
ABCD4-223	ENST00000555904	TBC1D3K	A0A087X1G2	549 aa		12.56	□□□□□ -0.4
ABCD4-223	ENST00000555904	C1orf232	A0A0U1RR37	186 aa		12.56	□□□□□ -0.4
ABCD4-223	ENST00000555904	TBC1D3F	A6NER0	549 aa	Predicted RBP	12.56	□□□□□ -0.4
ABCD4-223	ENST00000555904	FAM47DP	A6NHR8	397 aa		12.56	□□□□□ -0.4
ABCD4-223	ENST00000555904	TBC1D3L	B9A6J9	549 aa		12.56	□□□□□ -0.4
ABCD4-223	ENST00000555904	PLK4	O00444	970 aa		12.56	□□□□□ -0.4
ABCD4-223	ENST00000555904	MAP3K13	O43283	966 aa		12.56	□□□□□ -0.4
ABCD4-223	ENST00000555904	PLRG1	O43660	514 aa	Known RBP	12.56	□□□□□ -0.4
ABCD4-223	ENST00000555904	AP1G1	O43747	822 aa		12.56	□□□□□ -0.4
ABCD4-223	ENST00000555904	NDUFS2	O75306	463 aa		12.56	□□□□□ -0.4
ABCD4-223	ENST00000555904	TMEM63A	O94886	807 aa		12.56	□□□□□ -0.4
ABCD4-223	ENST00000555904	PCDH8	O95206	1070 aa		12.56	□□□□□ -0.4
ABCD4-223	ENST00000555904	CRTAM	O95727	393 aa		12.56	□□□□□ -0.4
ABCD4-223	ENST00000555904	IGLV3-19	P01714	112 aa		12.56	□□□□□ -0.4
ABCD4-223	ENST00000555904	SLC4A1	P02730	911 aa		12.56	□□□□□ -0.4
ABCD4-223	ENST00000555904	ALPI	P09923	528 aa		12.56	□□□□□ -0.4
ABCD4-223	ENST00000555904	ELFN1	P0C7U0	828 aa		12.56	□□□□□ -0.4
ABCD4-223	ENST00000555904	TBC1D3H	P0C7X1	549 aa		12.56	□□□□□ -0.4
ABCD4-223	ENST00000555904	MLN	P12872	115 aa		12.56	□□□□□ -0.4
ABCD4-223	ENST00000555904	ZNF30	P17039	623 aa		12.56	□□□□□ -0.4
ABCD4-223	ENST00000555904	MCM3	P25205	808 aa		12.56	□□□□□ -0.4
ABCD4-223	ENST00000555904	CD6	P30203	668 aa		12.56	□□□□□ -0.4
ABCD4-223	ENST00000555904	VIPR1	P32241	457 aa		12.56	□□□□□ -0.4
ABCD4-223	ENST00000555904	HNF1B	P35680	557 aa		12.56	□□□□□ -0.4
ABCD4-223	ENST00000555904	MMP12	P39900	470 aa		12.56	□□□□□ -0.4
ABCD4-223	ENST00000555904	ABL2	P42684	1182 aa		12.56	□□□□□ -0.4
ABCD4-223	ENST00000555904	NUBP1	P53384	320 aa		12.56	□□□□□ -0.4
ABCD4-223	ENST00000555904	ADPRH	P54922	357 aa		12.56	□□□□□ -0.4
ABCD4-223	ENST00000555904	PLTP	P55058	493 aa		12.56	□□□□□ -0.4
ABCD4-223	ENST00000555904	ARL4C	P56559	192 aa		12.56	□□□□□ -0.4
ABCD4-223	ENST00000555904	OLIG2	Q13516	323 aa		12.56	□□□□□ -0.4
ABCD4-223	ENST00000555904	SEPT6	Q14141	434 aa		12.56	□□□□□ -0.4
ABCD4-223	ENST00000555904	HIF1A	Q16665	826 aa		12.56	□□□□□ -0.4
ABCD4-223	ENST00000555904	ANKRD22	Q5VYY1	191 aa		12.56	□□□□□ -0.4
ABCD4-223	ENST00000555904	TBC1D3G	Q6DHY5	549 aa		12.56	□□□□□ -0.4
ABCD4-223	ENST00000555904	TBC1D3C	Q6IPX1	549 aa		12.56	□□□□□ -0.4
ABCD4-223	ENST00000555904	LRRC8B	Q6P9F7	803 aa		12.56	□□□□□ -0.4
ABCD4-223	ENST00000555904	TSSK4	Q6SA08	328 aa		12.56	□□□□□ -0.4
ABCD4-223	ENST00000555904	CEP128	Q6ZU80	1094 aa		12.56	□□□□□ -0.4
ABCD4-223	ENST00000555904	DPPA4	Q7L190	304 aa		12.56	□□□□□ -0.4
ABCD4-223	ENST00000555904	LONP2	Q86WA8	852 aa		12.56	□□□□□ -0.4
ABCD4-223	ENST00000555904	TBC1D3	Q8IZP1	549 aa	Predicted RBP	12.56	□□□□□ -0.4
ABCD4-223	ENST00000555904	PPHLN1	Q8NEY8	458 aa	Known RBP	12.56	□□□□□ -0.4
ABCD4-223	ENST00000555904	CXorf40A	Q8TE69	158 aa		12.56	□□□□□ -0.4
ABCD4-223	ENST00000555904	IFT81	Q8WYA0	676 aa		12.56	□□□□□ -0.4
ABCD4-223	ENST00000555904	SERPINB12	Q96P63	405 aa		12.56	□□□□□ -0.4
ABCD4-223	ENST00000555904	HINFP	Q9BQA5	517 aa		12.56	□□□□□ -0.4
ABCD4-223	ENST00000555904	GPR63	Q9BZJ6	419 aa		12.56	□□□□□ -0.4
ABCD4-223	ENST00000555904	IL22	Q9GZX6	179 aa		12.56	□□□□□ -0.4
ABCD4-223	ENST00000555904	PREB	Q9HCU5	417 aa		12.56	□□□□□ -0.4
ABCD4-223	ENST00000555904	CASS4	Q9NQ75	786 aa		12.56	□□□□□ -0.4
ABCD4-223	ENST00000555904	PIH1D1	Q9NWS0	290 aa	Known RBP	12.56	□□□□□ -0.4
ABCD4-223	ENST00000555904	B4GALT6	Q9UBX8	382 aa		12.56	□□□□□ -0.4
ABCD4-223	ENST00000555904	DMGDH	Q9UI17	866 aa	Known RBP	12.56	□□□□□ -0.4
ABCD4-223	ENST00000555904	PPIL1	Q9Y3C6	166 aa		12.56	□□□□□ -0.4
ABCD4-223	ENST00000555904	TCRBV7S3A2	A0A539	114 aa		12.55	□□□□□ -0.4
ABCD4-223	ENST00000555904	PRR23A	A6NEV1	266 aa		12.55	□□□□□ -0.4
ABCD4-223	ENST00000555904	NPIPB15	A6NHN6	443 aa	Predicted RBP	12.55	□□□□□ -0.4
ABCD4-223	ENST00000555904	C2orf81	A6NN90	581 aa		12.55	□□□□□ -0.4
ABCD4-223	ENST00000555904		A8MX80	341 aa		12.55	□□□□□ -0.4
ABCD4-223	ENST00000555904		H0Y858	1186 aa		12.55	□□□□□ -0.4
ABCD4-223	ENST00000555904	AREL1	O15033	823 aa		12.55	□□□□□ -0.4
ABCD4-223	ENST00000555904	SEMA4F	O95754	770 aa		12.55	□□□□□ -0.4
ABCD4-223	ENST00000555904	PRKCG	P05129	697 aa		12.55	□□□□□ -0.4
ABCD4-223	ENST00000555904	PIRT	P0C851	137 aa		12.55	□□□□□ -0.4
ABCD4-223	ENST00000555904	NPY2R	P49146	381 aa		12.55	□□□□□ -0.4
ABCD4-223	ENST00000555904	SESN2	P58004	480 aa	Predicted RBP	12.55	□□□□□ -0.4
ABCD4-223	ENST00000555904	RPS21	P63220	83 aa	Known RBP	12.55	□□□□□ -0.4
ABCD4-223	ENST00000555904	POU6F1	Q14863	301 aa		12.55	□□□□□ -0.4
ABCD4-223	ENST00000555904	KIAA1161	Q6NSJ0	714 aa		12.55	□□□□□ -0.4
ABCD4-223	ENST00000555904	NEK5	Q6P3R8	708 aa		12.55	□□□□□ -0.4
ABCD4-223	ENST00000555904	CASC4	Q6P4E1	433 aa		12.55	□□□□□ -0.4
ABCD4-223	ENST00000555904	SLC36A4	Q6YBV0	504 aa		12.55	□□□□□ -0.4
ABCD4-223	ENST00000555904	CENPU	Q71F23	418 aa		12.55	□□□□□ -0.4
ABCD4-223	ENST00000555904	C11orf74	Q86VG3	221 aa		12.55	□□□□□ -0.4
ABCD4-223	ENST00000555904	ZCCHC9	Q8N567	271 aa	Known RBP	12.55	□□□□□ -0.4
ABCD4-223	ENST00000555904	OR2T34	Q8NGX1	318 aa		12.55	□□□□□ -0.4
ABCD4-223	ENST00000555904	BRSK1	Q8TDC3	778 aa		12.55	□□□□□ -0.4
ABCD4-223	ENST00000555904	SEC14L1	Q92503	715 aa		12.55	□□□□□ -0.4
ABCD4-223	ENST00000555904	ART4	Q93070	314 aa		12.55	□□□□□ -0.4
ABCD4-223	ENST00000555904	FAM131C	Q96AQ9	280 aa		12.55	□□□□□ -0.4
ABCD4-223	ENST00000555904	TOE1	Q96GM8	510 aa	Known RBP	12.55	□□□□□ -0.4
ABCD4-223	ENST00000555904	LYSMD1	Q96S90	227 aa		12.55	□□□□□ -0.4
ABCD4-223	ENST00000555904	WRAP53	Q9BUR4	548 aa	Known RBP	12.55	□□□□□ -0.4
ABCD4-223	ENST00000555904	C1QTNF7	Q9BXJ2	289 aa		12.55	□□□□□ -0.4

Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms