RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 LHCGRP22888 699 aa13.74□□□□□ -0.21
SNX6-203ENST00000555416 GRK6P43250 576 aa13.74□□□□□ -0.21
SNX6-203ENST00000555416 ARRB1P49407 418 aaPredicted RBP13.74□□□□□ -0.21
SNX6-203ENST00000555416 VAV2P52735 878 aa13.74□□□□□ -0.21
SNX6-203ENST00000555416 PPIDQ08752 370 aaKnown RBP13.74□□□□□ -0.21
SNX6-203ENST00000555416 ITKQ08881 620 aa13.74□□□□□ -0.21
SNX6-203ENST00000555416 EIF2B5Q13144 721 aaKnown RBP13.74□□□□□ -0.21
SNX6-203ENST00000555416 PDE1CQ14123 709 aaPredicted RBP13.74□□□□□ -0.21
SNX6-203ENST00000555416 KAZNQ674X7 775 aa13.74□□□□□ -0.21
SNX6-203ENST00000555416 KCTD16Q68DU8 428 aa13.74□□□□□ -0.21
SNX6-203ENST00000555416 TIGD7Q6NT04 549 aaPredicted RBP13.74□□□□□ -0.21
SNX6-203ENST00000555416 ERAP2Q6P179 960 aa13.74□□□□□ -0.21
SNX6-203ENST00000555416 TSPAN33Q86UF1 283 aa13.74□□□□□ -0.21
SNX6-203ENST00000555416 ZSCAN30Q86W11 494 aa13.74□□□□□ -0.21
SNX6-203ENST00000555416 KATNAL2Q8IYT4 538 aa13.74□□□□□ -0.21
SNX6-203ENST00000555416 BBS5Q8N3I7 341 aa13.74□□□□□ -0.21
SNX6-203ENST00000555416 CHCHD4Q8N4Q1 142 aa13.74□□□□□ -0.21
SNX6-203ENST00000555416 LRRC57Q8N9N7 239 aa13.74□□□□□ -0.21
SNX6-203ENST00000555416 DENND6BQ8NEG7 585 aa13.74□□□□□ -0.21
SNX6-203ENST00000555416 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.74□□□□□ -0.21
SNX6-203ENST00000555416 PIH1D2Q8WWB5 315 aa13.74□□□□□ -0.21
SNX6-203ENST00000555416 SPOCK2Q92563 424 aa13.74□□□□□ -0.21
SNX6-203ENST00000555416 IL12RB2Q99665 862 aa13.74□□□□□ -0.21
SNX6-203ENST00000555416 TCEAL2Q9H3H9 227 aaPredicted RBP13.74□□□□□ -0.21
SNX6-203ENST00000555416 TTLL3Q9Y4R7 772 aa13.74□□□□□ -0.21
SNX6-203ENST00000555416 RAI2Q9Y5P3 530 aa13.74□□□□□ -0.21
SNX6-203ENST00000555416 hCG_1818297A0A087WSY0 165 aa13.73□□□□□ -0.21
SNX6-203ENST00000555416 NPIPB15A6NHN6 443 aaPredicted RBP13.73□□□□□ -0.21
SNX6-203ENST00000555416 BTNL10A8MVZ5 291 aa13.73□□□□□ -0.21
SNX6-203ENST00000555416 TRIM38O00635 465 aa13.73□□□□□ -0.21
SNX6-203ENST00000555416 FZD6O60353 706 aa13.73□□□□□ -0.21
SNX6-203ENST00000555416 CST8O60676 142 aa13.73□□□□□ -0.21
SNX6-203ENST00000555416 PIAS2O75928 621 aa13.73□□□□□ -0.21
SNX6-203ENST00000555416 RECQL5O94762 991 aaPredicted RBP13.73□□□□□ -0.21
SNX6-203ENST00000555416 ALPIP09923 528 aa13.73□□□□□ -0.21
SNX6-203ENST00000555416 CTPS1P17812 591 aa13.73□□□□□ -0.21
SNX6-203ENST00000555416 MX2P20592 715 aa13.73□□□□□ -0.21
SNX6-203ENST00000555416 DGKAP23743 735 aa13.73□□□□□ -0.21
SNX6-203ENST00000555416 RABIFP47224 123 aa13.73□□□□□ -0.21
SNX6-203ENST00000555416 SHC2P98077 582 aa13.73□□□□□ -0.21
SNX6-203ENST00000555416 DNAJC3Q13217 504 aa13.73□□□□□ -0.21
SNX6-203ENST00000555416 LRRC14Q15048 493 aa13.73□□□□□ -0.21
SNX6-203ENST00000555416 CNGA3Q16281 694 aa13.73□□□□□ -0.21
SNX6-203ENST00000555416 AADACL2Q6P093 401 aa13.73□□□□□ -0.21
SNX6-203ENST00000555416 RFLNAQ6ZTI6 216 aa13.73□□□□□ -0.21
SNX6-203ENST00000555416 CBARPQ8N350 705 aaPredicted RBP13.73□□□□□ -0.21
SNX6-203ENST00000555416 OXR1Q8N573 874 aa13.73□□□□□ -0.21
SNX6-203ENST00000555416 PAF1Q8N7H5 531 aa13.73□□□□□ -0.21
SNX6-203ENST00000555416 ALG3Q92685 438 aa13.73□□□□□ -0.21
SNX6-203ENST00000555416 HEMGNQ9BXL5 484 aa13.73□□□□□ -0.21
SNX6-203ENST00000555416 MAK16Q9BXY0 300 aaKnown RBP13.73□□□□□ -0.21
SNX6-203ENST00000555416 POLR1EQ9GZS1 481 aaKnown RBP13.73□□□□□ -0.21
SNX6-203ENST00000555416 LUC7LQ9NQ29 371 aaKnown RBP13.73□□□□□ -0.21
SNX6-203ENST00000555416 DNAJC28Q9NX36 388 aa13.73□□□□□ -0.21
SNX6-203ENST00000555416 CHKBQ9Y259 395 aa13.73□□□□□ -0.21
SNX6-203ENST00000555416 OR1A2Q9Y585 309 aa13.73□□□□□ -0.21
SNX6-203ENST00000555416 TPRP12270 2363 aaKnown RBP13.72□□□□□ -0.21
SNX6-203ENST00000555416 K7ESM1 405 aa13.72□□□□□ -0.21
SNX6-203ENST00000555416 YKT6O15498 198 aa13.72□□□□□ -0.21
SNX6-203ENST00000555416 LZTS3O60299 673 aaPredicted RBP13.72□□□□□ -0.21
SNX6-203ENST00000555416 NEBLO76041 1014 aa13.72□□□□□ -0.21
SNX6-203ENST00000555416 DKK1O94907 266 aa13.72□□□□□ -0.21
SNX6-203ENST00000555416 ZRANB2O95218 330 aaKnown RBP eCLIP13.72□□□□□ -0.21
SNX6-203ENST00000555416 PCCBP05166 539 aa13.72□□□□□ -0.21
SNX6-203ENST00000555416 ELFN1P0C7U0 828 aa13.72□□□□□ -0.21
SNX6-203ENST00000555416 VIPR1P32241 457 aa13.72□□□□□ -0.21
SNX6-203ENST00000555416 CTNNA1P35221 906 aaKnown RBP13.72□□□□□ -0.21
SNX6-203ENST00000555416 PEX5P50542 639 aa13.72□□□□□ -0.21
SNX6-203ENST00000555416 POLR2LP62875 67 aaKnown RBP13.72□□□□□ -0.21
SNX6-203ENST00000555416 IFI35P80217 286 aaPredicted RBP13.72□□□□□ -0.21
SNX6-203ENST00000555416 SKOR1P84550 965 aa13.72□□□□□ -0.21
SNX6-203ENST00000555416 AP1B1Q10567 949 aa13.72□□□□□ -0.21
SNX6-203ENST00000555416 INPP5AQ14642 412 aa13.72□□□□□ -0.21
SNX6-203ENST00000555416 AGERQ15109 404 aa13.72□□□□□ -0.21
SNX6-203ENST00000555416 RALGPS1Q5JS13 557 aa13.72□□□□□ -0.21
SNX6-203ENST00000555416 ARMC12Q5T9G4 340 aa13.72□□□□□ -0.21
SNX6-203ENST00000555416 HSD11B1LQ7Z5J1 315 aa13.72□□□□□ -0.21
SNX6-203ENST00000555416 RAB44Q7Z6P3 723 aaPredicted RBP13.72□□□□□ -0.21
SNX6-203ENST00000555416 KIAA1328Q86T90 577 aa13.72□□□□□ -0.21
SNX6-203ENST00000555416 MARCH9Q86YJ5 346 aa13.72□□□□□ -0.21
SNX6-203ENST00000555416 DCP2Q8IU60 420 aaKnown RBP13.72□□□□□ -0.21
SNX6-203ENST00000555416 RBFAQ8N0V3 343 aa13.72□□□□□ -0.21
SNX6-203ENST00000555416 HAUS1Q96CS2 278 aa13.72□□□□□ -0.21
SNX6-203ENST00000555416 COQ10AQ96MF6 247 aa13.72□□□□□ -0.21
SNX6-203ENST00000555416 MCCC1Q96RQ3 725 aaPredicted RBP13.72□□□□□ -0.21
SNX6-203ENST00000555416 CDC6Q99741 560 aa13.72□□□□□ -0.21
SNX6-203ENST00000555416 SCNM1Q9BWG6 230 aa13.72□□□□□ -0.21
SNX6-203ENST00000555416 C10orf88Q9H8K7 445 aa13.72□□□□□ -0.21
SNX6-203ENST00000555416 KLK13Q9UKR3 277 aa13.72□□□□□ -0.21
SNX6-203ENST00000555416 ANGPTL2Q9UKU9 493 aa13.72□□□□□ -0.21
SNX6-203ENST00000555416 PCDHA3Q9Y5H8 950 aa13.72□□□□□ -0.21
SNX6-203ENST00000555416 COL5A1P20908 1838 aaPredicted RBP13.71□□□□□ -0.21
SNX6-203ENST00000555416 ACACBO00763 2458 aa13.71□□□□□ -0.21
SNX6-203ENST00000555416 MACROD2A1Z1Q3 448 aa13.71□□□□□ -0.21
SNX6-203ENST00000555416 SCAMP1O15126 338 aa13.71□□□□□ -0.21
SNX6-203ENST00000555416 FFAR2O15552 330 aa13.71□□□□□ -0.21
SNX6-203ENST00000555416 TNFSF14O43557 240 aa13.71□□□□□ -0.21
SNX6-203ENST00000555416 SIGLEC6O43699 453 aa13.71□□□□□ -0.21
SNX6-203ENST00000555416 HEXIM1O94992 359 aaKnown RBP13.71□□□□□ -0.21
SNX6-203ENST00000555416 IPO7O95373 1038 aaKnown RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms