RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 NCKIPSDQ9NZQ3 722 aa5.49□□□□□ -1.53
VRK1-203ENST00000555067 C5AR2Q9P296 337 aa5.49□□□□□ -1.53
VRK1-203ENST00000555067 RASAL2Q9UJF2 1139 aa5.49□□□□□ -1.53
VRK1-203ENST00000555067 SARDHQ9UL12 918 aa5.49□□□□□ -1.53
VRK1-203ENST00000555067 TMCC3Q9ULS5 477 aa5.49□□□□□ -1.53
VRK1-203ENST00000555067 PA2G4Q9UQ80 394 aaKnown RBP5.49□□□□□ -1.53
VRK1-203ENST00000555067 FAM169AQ9Y6X4 670 aa5.49□□□□□ -1.53
VRK1-203ENST00000555067 CXorf65A6NEN9 183 aa5.48□□□□□ -1.53
VRK1-203ENST00000555067 OR6C75A6NL08 312 aa5.48□□□□□ -1.53
VRK1-203ENST00000555067 HNRNPRO43390 633 aaKnown RBP5.48□□□□□ -1.53
VRK1-203ENST00000555067 ENTPD3O75355 529 aa5.48□□□□□ -1.53
VRK1-203ENST00000555067 HEXIM1O94992 359 aaKnown RBP5.48□□□□□ -1.53
VRK1-203ENST00000555067 GOSR1O95249 250 aa5.48□□□□□ -1.53
VRK1-203ENST00000555067 AFPP02771 609 aaKnown RBP5.48□□□□□ -1.53
VRK1-203ENST00000555067 CYP1A2P05177 515 aa5.48□□□□□ -1.53
VRK1-203ENST00000555067 WEE2P0C1S8 567 aa5.48□□□□□ -1.53
VRK1-203ENST00000555067 PRKCHP24723 683 aa5.48□□□□□ -1.53
VRK1-203ENST00000555067 ATP5DP30049 168 aa5.48□□□□□ -1.53
VRK1-203ENST00000555067 RAD23AP54725 363 aa5.48□□□□□ -1.53
VRK1-203ENST00000555067 CDH15P55291 814 aa5.48□□□□□ -1.53
VRK1-203ENST00000555067 COG2Q14746 738 aa5.48□□□□□ -1.53
VRK1-203ENST00000555067 ENTPD8Q5MY95 495 aa5.48□□□□□ -1.53
VRK1-203ENST00000555067 PLEKHS1Q5SXH7 462 aa5.48□□□□□ -1.53
VRK1-203ENST00000555067 GARNL3Q5VVW2 1013 aa5.48□□□□□ -1.53
VRK1-203ENST00000555067 ATG9BQ674R7 924 aa5.48□□□□□ -1.53
VRK1-203ENST00000555067 DENND1BQ6P3S1 775 aa5.48□□□□□ -1.53
VRK1-203ENST00000555067 DCLRE1AQ6PJP8 1040 aa5.48□□□□□ -1.53
VRK1-203ENST00000555067 Q6ZTK2 550 aa5.48□□□□□ -1.53
VRK1-203ENST00000555067 CCDC91Q7Z6B0 441 aa5.48□□□□□ -1.53
VRK1-203ENST00000555067 CTU1Q7Z7A3 348 aaKnown RBP5.48□□□□□ -1.53
VRK1-203ENST00000555067 PRR26Q8N8Z3 221 aa5.48□□□□□ -1.53
VRK1-203ENST00000555067 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.48□□□□□ -1.53
VRK1-203ENST00000555067 GABPB2Q8TAK5 448 aaPredicted RBP5.48□□□□□ -1.53
VRK1-203ENST00000555067 RUFY2Q8WXA3 655 aa5.48□□□□□ -1.53
VRK1-203ENST00000555067 KIF1BPQ96EK5 621 aa5.48□□□□□ -1.53
VRK1-203ENST00000555067 REXO5Q96IC2 774 aaKnown RBP5.48□□□□□ -1.53
VRK1-203ENST00000555067 ADAD1Q96M93 576 aaKnown RBP5.48□□□□□ -1.53
VRK1-203ENST00000555067 FNBP1Q96RU3 617 aa5.48□□□□□ -1.53
VRK1-203ENST00000555067 MYCBPQ99417 103 aaPredicted RBP5.48□□□□□ -1.53
VRK1-203ENST00000555067 LBHD1Q9BQE6 289 aaPredicted RBP5.48□□□□□ -1.53
VRK1-203ENST00000555067 ERVMER34-1Q9H9K5 563 aa5.48□□□□□ -1.53
VRK1-203ENST00000555067 TRPV4Q9HBA0 871 aa5.48□□□□□ -1.53
VRK1-203ENST00000555067 TMLHEQ9NVH6 421 aa5.48□□□□□ -1.53
VRK1-203ENST00000555067 PPP1R14DQ9NXH3 145 aa5.48□□□□□ -1.53
VRK1-203ENST00000555067 ZBTB1Q9Y2K1 713 aa5.48□□□□□ -1.53
VRK1-203ENST00000555067 CYP3A7-CYP3A51PA0A087WV96 503 aa5.47□□□□□ -1.53
VRK1-203ENST00000555067 LIPT2A6NK58 231 aa5.47□□□□□ -1.53
VRK1-203ENST00000555067 SH2D7A6NKC9 451 aaPredicted RBP5.47□□□□□ -1.53
VRK1-203ENST00000555067 KCNJ18B7U540 433 aa5.47□□□□□ -1.53
VRK1-203ENST00000555067 SPRY3O43610 288 aa5.47□□□□□ -1.53
VRK1-203ENST00000555067 PAPSS2O95340 614 aaPredicted RBP5.47□□□□□ -1.53
VRK1-203ENST00000555067 MT-ND3P03897 115 aa5.47□□□□□ -1.53
VRK1-203ENST00000555067 ATP5BP06576 529 aaKnown RBP5.47□□□□□ -1.53
VRK1-203ENST00000555067 ARSBP15848 533 aa5.47□□□□□ -1.53
VRK1-203ENST00000555067 IFNAR1P17181 557 aa5.47□□□□□ -1.53
VRK1-203ENST00000555067 CYP3A7P24462 503 aa5.47□□□□□ -1.53
VRK1-203ENST00000555067 HOXD3P31249 432 aaPredicted RBP5.47□□□□□ -1.53
VRK1-203ENST00000555067 GRK5P34947 590 aa5.47□□□□□ -1.53
VRK1-203ENST00000555067 BSGP35613 385 aa5.47□□□□□ -1.53
VRK1-203ENST00000555067 PPARGP37231 505 aaPredicted RBP5.47□□□□□ -1.53
VRK1-203ENST00000555067 GAS1P54826 345 aa5.47□□□□□ -1.53
VRK1-203ENST00000555067 DSCR9P59020 149 aa5.47□□□□□ -1.53
VRK1-203ENST00000555067 RBP5P82980 135 aa5.47□□□□□ -1.53
VRK1-203ENST00000555067 CRYZQ08257 329 aaKnown RBP5.47□□□□□ -1.53
VRK1-203ENST00000555067 TFCP2Q12800 502 aa5.47□□□□□ -1.53
VRK1-203ENST00000555067 IRF3Q14653 427 aa5.47□□□□□ -1.53
VRK1-203ENST00000555067 TBRG1Q3YBR2 411 aa5.47□□□□□ -1.53
VRK1-203ENST00000555067 OTUD1Q5VV17 481 aaPredicted RBP5.47□□□□□ -1.53
VRK1-203ENST00000555067 MTFR2Q6P444 385 aa5.47□□□□□ -1.53
VRK1-203ENST00000555067 SHQ1Q6PI26 577 aaKnown RBP5.47□□□□□ -1.53
VRK1-203ENST00000555067 SLC16A12Q6ZSM3 486 aa5.47□□□□□ -1.53
VRK1-203ENST00000555067 MDGA2Q7Z553 956 aa5.47□□□□□ -1.53
VRK1-203ENST00000555067 CCDC170Q8IYT3 715 aa5.47□□□□□ -1.53
VRK1-203ENST00000555067 FAM185AQ8N0U4 392 aa5.47□□□□□ -1.53
VRK1-203ENST00000555067 SLC25A41Q8N5S1 370 aa5.47□□□□□ -1.53
VRK1-203ENST00000555067 ZNF419Q96HQ0 510 aaPredicted RBP5.47□□□□□ -1.53
VRK1-203ENST00000555067 PIP5K1AQ99755 562 aa5.47□□□□□ -1.53
VRK1-203ENST00000555067 MAK16Q9BXY0 300 aaKnown RBP5.47□□□□□ -1.53
VRK1-203ENST00000555067 TM6SF1Q9BZW5 370 aa5.47□□□□□ -1.53
VRK1-203ENST00000555067 MROH8Q9H579 483 aa5.47□□□□□ -1.53
VRK1-203ENST00000555067 PNRC2Q9NPJ4 139 aaKnown RBP5.47□□□□□ -1.53
VRK1-203ENST00000555067 BEX4Q9NWD9 120 aaPredicted RBP5.47□□□□□ -1.53
VRK1-203ENST00000555067 FZD10Q9ULW2 581 aa5.47□□□□□ -1.53
VRK1-203ENST00000555067 KNSTRNQ9Y448 316 aa5.47□□□□□ -1.53
VRK1-203ENST00000555067 PCDHA10Q9Y5I2 948 aa5.47□□□□□ -1.53
VRK1-203ENST00000555067 KCNE2Q9Y6J6 123 aa5.47□□□□□ -1.53
VRK1-203ENST00000555067 FAM90A7PA6NKC0 464 aa5.46□□□□□ -1.54
VRK1-203ENST00000555067 FAM90A22PA8MWA6 464 aa5.46□□□□□ -1.54
VRK1-203ENST00000555067 FAM90A12PA8MX19 464 aa5.46□□□□□ -1.54
VRK1-203ENST00000555067 FAM90A23PA8MXZ1 464 aa5.46□□□□□ -1.54
VRK1-203ENST00000555067 MYO1GB0I1T2 1018 aa5.46□□□□□ -1.54
VRK1-203ENST00000555067 MCIDASD6RGH6 385 aa5.46□□□□□ -1.54
VRK1-203ENST00000555067 M0QYT0 321 aa5.46□□□□□ -1.54
VRK1-203ENST00000555067 SYN3O14994 580 aa5.46□□□□□ -1.54
VRK1-203ENST00000555067 CYP3A4P08684 503 aa5.46□□□□□ -1.54
VRK1-203ENST00000555067 ACP5P13686 325 aa5.46□□□□□ -1.54
VRK1-203ENST00000555067 CHN1P15882 459 aa5.46□□□□□ -1.54
VRK1-203ENST00000555067 CHRNA5P30532 468 aa5.46□□□□□ -1.54
VRK1-203ENST00000555067 THPOP40225 353 aa5.46□□□□□ -1.54
VRK1-203ENST00000555067 ZNF41P51814 821 aaPredicted RBP5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms