RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 COPG2Q9UBF2 871 aa8.94□□□□□ -0.98
TDP1-210ENST00000554976 FBXO10Q9UK96 956 aa8.94□□□□□ -0.98
TDP1-210ENST00000554976 FBXO5Q9UKT4 447 aa8.94□□□□□ -0.98
TDP1-210ENST00000554976 CHKBQ9Y259 395 aa8.94□□□□□ -0.98
TDP1-210ENST00000554976 FCF1Q9Y324 198 aaKnown RBP8.94□□□□□ -0.98
TDP1-210ENST00000554976 RAI2Q9Y5P3 530 aa8.94□□□□□ -0.98
TDP1-210ENST00000554976 A0A096LPK6 155 aa8.94□□□□□ -0.98
TDP1-210ENST00000554976 FAM95CA0A1B0GW59 222 aa8.94□□□□□ -0.98
TDP1-210ENST00000554976 WDR91A4D1P6 747 aa8.94□□□□□ -0.98
TDP1-210ENST00000554976 RPP40O75818 363 aaKnown RBP8.94□□□□□ -0.98
TDP1-210ENST00000554976 GOT2P00505 430 aaKnown RBP8.94□□□□□ -0.98
TDP1-210ENST00000554976 CEBPBP17676 345 aa8.94□□□□□ -0.98
TDP1-210ENST00000554976 NTHL1P78549 312 aa8.94□□□□□ -0.98
TDP1-210ENST00000554976 IFT88Q13099 833 aa8.94□□□□□ -0.98
TDP1-210ENST00000554976 PLEKHG6Q3KR16 790 aa8.94□□□□□ -0.98
TDP1-210ENST00000554976 CCDC153Q494R4 210 aa8.94□□□□□ -0.98
TDP1-210ENST00000554976 SETMARQ53H47 684 aaPredicted RBP8.94□□□□□ -0.98
TDP1-210ENST00000554976 RBM20Q5T481 1227 aaKnown RBP8.94□□□□□ -0.98
TDP1-210ENST00000554976 ZNF470Q6ECI4 717 aa8.94□□□□□ -0.98
TDP1-210ENST00000554976 NEPROQ6NW34 567 aa8.94□□□□□ -0.98
TDP1-210ENST00000554976 ZNF549Q6P9A3 640 aa8.94□□□□□ -0.98
TDP1-210ENST00000554976 TMEM207Q6UWW9 146 aa8.94□□□□□ -0.98
TDP1-210ENST00000554976 ZNF354CQ86Y25 554 aa8.94□□□□□ -0.98
TDP1-210ENST00000554976 SLC41A1Q8IVJ1 513 aa8.94□□□□□ -0.98
TDP1-210ENST00000554976 OR13C4Q8NGS5 318 aa8.94□□□□□ -0.98
TDP1-210ENST00000554976 GRIN3AQ8TCU5 1115 aa8.94□□□□□ -0.98
TDP1-210ENST00000554976 ACDQ96AP0 544 aa8.94□□□□□ -0.98
TDP1-210ENST00000554976 RSPRY1Q96DX4 576 aa8.94□□□□□ -0.98
TDP1-210ENST00000554976 DNAJC1Q96KC8 554 aaKnown RBP8.94□□□□□ -0.98
TDP1-210ENST00000554976 SPON2Q9BUD6 331 aa8.94□□□□□ -0.98
TDP1-210ENST00000554976 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.94□□□□□ -0.98
TDP1-210ENST00000554976 HS3ST2Q9Y278 367 aa8.94□□□□□ -0.98
TDP1-210ENST00000554976 MED16Q9Y2X0 877 aa8.94□□□□□ -0.98
TDP1-210ENST00000554976 OR51F1A6NGY5 319 aa8.94□□□□□ -0.98
TDP1-210ENST00000554976 EPOPA6NHQ4 379 aa8.94□□□□□ -0.98
TDP1-210ENST00000554976 CCL22O00626 93 aa8.94□□□□□ -0.98
TDP1-210ENST00000554976 GAPDHSO14556 408 aaPredicted RBP8.94□□□□□ -0.98
TDP1-210ENST00000554976 COL6A2P12110 1019 aa8.94□□□□□ -0.98
TDP1-210ENST00000554976 CTSOP43234 321 aaPredicted RBP8.94□□□□□ -0.98
TDP1-210ENST00000554976 BST1Q10588 318 aa8.94□□□□□ -0.98
TDP1-210ENST00000554976 SLC12A1Q13621 1099 aa8.94□□□□□ -0.98
TDP1-210ENST00000554976 PTPRRQ15256 657 aa8.94□□□□□ -0.98
TDP1-210ENST00000554976 SHHQ15465 462 aa8.94□□□□□ -0.98
TDP1-210ENST00000554976 DUSP6Q16828 381 aa8.94□□□□□ -0.98
TDP1-210ENST00000554976 UGP2Q16851 508 aa8.94□□□□□ -0.98
TDP1-210ENST00000554976 DGKKQ5KSL6 1271 aa8.94□□□□□ -0.98
TDP1-210ENST00000554976 TAX1BP1Q86VP1 789 aa8.94□□□□□ -0.98
TDP1-210ENST00000554976 ZSWIM9Q86XI8 627 aa8.94□□□□□ -0.98
TDP1-210ENST00000554976 RNF135Q8IUD6 432 aa8.94□□□□□ -0.98
TDP1-210ENST00000554976 FITM2Q8N6M3 262 aa8.94□□□□□ -0.98
TDP1-210ENST00000554976 CCDC63Q8NA47 563 aa8.94□□□□□ -0.98
TDP1-210ENST00000554976 SCG3Q8WXD2 468 aaKnown RBP8.94□□□□□ -0.98
TDP1-210ENST00000554976 HAUS2Q9NVX0 235 aa8.94□□□□□ -0.98
TDP1-210ENST00000554976 KIAA1522Q9P206 1035 aaPredicted RBP8.94□□□□□ -0.98
TDP1-210ENST00000554976 LRRK1Q38SD2 2015 aa8.93□□□□□ -0.98
TDP1-210ENST00000554976 CCDC162PA2VCL2 907 aa8.93□□□□□ -0.98
TDP1-210ENST00000554976 ANKRD66B4E2M5 251 aa8.93□□□□□ -0.98
TDP1-210ENST00000554976 ZNF195O14628 629 aa8.93□□□□□ -0.98
TDP1-210ENST00000554976 NEBLO76041 1014 aa8.93□□□□□ -0.98
TDP1-210ENST00000554976 FSBPO95073 299 aa8.93□□□□□ -0.98
TDP1-210ENST00000554976 ALOX15P16050 662 aaPredicted RBP8.93□□□□□ -0.98
TDP1-210ENST00000554976 OGNP20774 298 aaKnown RBP8.93□□□□□ -0.98
TDP1-210ENST00000554976 TYK2P29597 1187 aa8.93□□□□□ -0.98
TDP1-210ENST00000554976 CA8P35219 290 aa8.93□□□□□ -0.98
TDP1-210ENST00000554976 CD151P48509 253 aa8.93□□□□□ -0.98
TDP1-210ENST00000554976 VASPP50552 380 aaPredicted RBP8.93□□□□□ -0.98
TDP1-210ENST00000554976 SCNN1BP51168 640 aa8.93□□□□□ -0.98
TDP1-210ENST00000554976 MNAT1P51948 309 aa8.93□□□□□ -0.98
TDP1-210ENST00000554976 RAB10P61026 200 aa8.93□□□□□ -0.98
TDP1-210ENST00000554976 XIAPP98170 497 aa8.93□□□□□ -0.98
TDP1-210ENST00000554976 PEX6Q13608 980 aa8.93□□□□□ -0.98
TDP1-210ENST00000554976 SEPT6Q14141 434 aa8.93□□□□□ -0.98
TDP1-210ENST00000554976 CTC1Q2NKJ3 1217 aa8.93□□□□□ -0.98
TDP1-210ENST00000554976 GAB4Q2WGN9 574 aa8.93□□□□□ -0.98
TDP1-210ENST00000554976 FASTKD1Q53R41 847 aaKnown RBP8.93□□□□□ -0.98
TDP1-210ENST00000554976 PITRM1Q5JRX3 1037 aa8.93□□□□□ -0.98
TDP1-210ENST00000554976 SPDYAQ5MJ70 313 aa8.93□□□□□ -0.98
TDP1-210ENST00000554976 TMEM215Q68D42 235 aa8.93□□□□□ -0.98
TDP1-210ENST00000554976 NAPRTQ6XQN6 538 aa8.93□□□□□ -0.98
TDP1-210ENST00000554976 TRPM8Q7Z2W7 1104 aa8.93□□□□□ -0.98
TDP1-210ENST00000554976 ADIPOR2Q86V24 386 aa8.93□□□□□ -0.98
TDP1-210ENST00000554976 TMEM25Q86YD3 366 aa8.93□□□□□ -0.98
TDP1-210ENST00000554976 SPNS2Q8IVW8 549 aa8.93□□□□□ -0.98
TDP1-210ENST00000554976 BBS5Q8N3I7 341 aa8.93□□□□□ -0.98
TDP1-210ENST00000554976 PNPLA1Q8N8W4 532 aa8.93□□□□□ -0.98
TDP1-210ENST00000554976 HDAC10Q969S8 669 aa8.93□□□□□ -0.98
TDP1-210ENST00000554976 ISG20Q96AZ6 181 aaKnown RBP8.93□□□□□ -0.98
TDP1-210ENST00000554976 ECHDC3Q96DC8 303 aa8.93□□□□□ -0.98
TDP1-210ENST00000554976 IFT43Q96FT9 208 aa8.93□□□□□ -0.98
TDP1-210ENST00000554976 ATXN7L3BQ96GX2 97 aa8.93□□□□□ -0.98
TDP1-210ENST00000554976 UBXN10Q96LJ8 280 aa8.93□□□□□ -0.98
TDP1-210ENST00000554976 TBATAQ96M53 351 aa8.93□□□□□ -0.98
TDP1-210ENST00000554976 GCNAQ96QF7 691 aa8.93□□□□□ -0.98
TDP1-210ENST00000554976 TSSK1BQ9BXA7 367 aa8.93□□□□□ -0.98
TDP1-210ENST00000554976 ZNF395Q9H8N7 513 aaPredicted RBP8.93□□□□□ -0.98
TDP1-210ENST00000554976 FBXO6Q9NRD1 293 aaPredicted RBP8.93□□□□□ -0.98
TDP1-210ENST00000554976 TDP1Q9NUW8 608 aa8.93□□□□□ -0.98
TDP1-210ENST00000554976 VPS28Q9UK41 221 aa8.93□□□□□ -0.98
TDP1-210ENST00000554976 PPIL1Q9Y3C6 166 aa8.93□□□□□ -0.98
TDP1-210ENST00000554976 MTF2Q9Y483 593 aaPredicted RBP8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms