RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 GBA2Q9HCG7 927 aaPredicted RBP15.73■□□□□ 0.11
SYNE3-203ENST00000554873 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.73■□□□□ 0.11
SYNE3-203ENST00000554873 MOCS1Q9NZB8 636 aa15.73■□□□□ 0.11
SYNE3-203ENST00000554873 SLC17A6Q9P2U8 582 aa15.73■□□□□ 0.11
SYNE3-203ENST00000554873 EVPLLA8MZ36 301 aa15.73■□□□□ 0.11
SYNE3-203ENST00000554873 MAN1A2O60476 641 aa15.73■□□□□ 0.11
SYNE3-203ENST00000554873 ABCB7O75027 752 aa15.73■□□□□ 0.11
SYNE3-203ENST00000554873 UGT2B11O75310 529 aa15.73■□□□□ 0.11
SYNE3-203ENST00000554873 TOMM70O94826 608 aa15.73■□□□□ 0.11
SYNE3-203ENST00000554873 RASAL1O95294 804 aa15.73■□□□□ 0.11
SYNE3-203ENST00000554873 ADORA2AP29274 412 aa15.73■□□□□ 0.11
SYNE3-203ENST00000554873 NDST1P52848 882 aa15.73■□□□□ 0.11
SYNE3-203ENST00000554873 VAC14Q08AM6 782 aa15.73■□□□□ 0.11
SYNE3-203ENST00000554873 RALGDSQ12967 914 aa15.73■□□□□ 0.11
SYNE3-203ENST00000554873 STILQ15468 1287 aa15.73■□□□□ 0.11
SYNE3-203ENST00000554873 TMEM198Q66K66 360 aa15.73■□□□□ 0.11
SYNE3-203ENST00000554873 DHFR2Q86XF0 187 aa15.73■□□□□ 0.11
SYNE3-203ENST00000554873 ELMOD2Q8IZ81 293 aa15.73■□□□□ 0.11
SYNE3-203ENST00000554873 SCML4Q8N228 414 aa15.73■□□□□ 0.11
SYNE3-203ENST00000554873 OR2T34Q8NGX1 318 aa15.73■□□□□ 0.11
SYNE3-203ENST00000554873 OR2T3Q8NH03 318 aa15.73■□□□□ 0.11
SYNE3-203ENST00000554873 RMDN1Q96DB5 314 aa15.73■□□□□ 0.11
SYNE3-203ENST00000554873 FUNDC2Q9BWH2 189 aa15.73■□□□□ 0.11
SYNE3-203ENST00000554873 MAGEB5Q9BZ81 275 aa15.73■□□□□ 0.11
SYNE3-203ENST00000554873 CYP3A43Q9HB55 503 aa15.73■□□□□ 0.11
SYNE3-203ENST00000554873 SNTG2Q9NY99 539 aa15.73■□□□□ 0.11
SYNE3-203ENST00000554873 TSPAN16Q9UKR8 245 aa15.73■□□□□ 0.11
SYNE3-203ENST00000554873 ISPDA4D126 451 aa15.72■□□□□ 0.11
SYNE3-203ENST00000554873 UNCXA6NJT0 531 aa15.72■□□□□ 0.11
SYNE3-203ENST00000554873 TOR1BO14657 336 aa15.72■□□□□ 0.11
SYNE3-203ENST00000554873 H2AFYO75367 372 aaKnown RBP15.72■□□□□ 0.11
SYNE3-203ENST00000554873 HSPA1AP0DMV8 641 aaKnown RBP15.72■□□□□ 0.11
SYNE3-203ENST00000554873 HSPA1BP0DMV9 641 aaKnown RBP15.72■□□□□ 0.11
SYNE3-203ENST00000554873 PPP2R2BQ00005 443 aa15.72■□□□□ 0.11
SYNE3-203ENST00000554873 GBE1Q04446 702 aa15.72■□□□□ 0.11
SYNE3-203ENST00000554873 DCAF15Q66K64 600 aa15.72■□□□□ 0.11
SYNE3-203ENST00000554873 CYS1Q717R9 158 aa15.72■□□□□ 0.11
SYNE3-203ENST00000554873 LINC00523Q86TU6 105 aa15.72■□□□□ 0.11
SYNE3-203ENST00000554873 C12orf29Q8N999 325 aa15.72■□□□□ 0.11
SYNE3-203ENST00000554873 HTRA1Q92743 480 aa15.72■□□□□ 0.11
SYNE3-203ENST00000554873 KHSRPQ92945 711 aaKnown RBP eCLIP15.72■□□□□ 0.11
SYNE3-203ENST00000554873 FAM167AQ96KS9 214 aa15.72■□□□□ 0.11
SYNE3-203ENST00000554873 CCM2LQ9NUG4 571 aaPredicted RBP15.72■□□□□ 0.11
SYNE3-203ENST00000554873 WARS2Q9UGM6 360 aaKnown RBP15.72■□□□□ 0.11
SYNE3-203ENST00000554873 CDYLQ9Y232 598 aa15.72■□□□□ 0.11
SYNE3-203ENST00000554873 SOWAHBA6NEL2 793 aa15.72■□□□□ 0.11
SYNE3-203ENST00000554873 NRP1O14786 923 aa15.72■□□□□ 0.11
SYNE3-203ENST00000554873 NADKO95544 446 aaPredicted RBP15.72■□□□□ 0.11
SYNE3-203ENST00000554873 STAG3L1P0CL83 205 aa15.72■□□□□ 0.11
SYNE3-203ENST00000554873 MPSTP25325 297 aa15.72■□□□□ 0.11
SYNE3-203ENST00000554873 NXNQ6DKJ4 435 aa15.72■□□□□ 0.11
SYNE3-203ENST00000554873 LCLAT1Q6UWP7 414 aa15.72■□□□□ 0.11
SYNE3-203ENST00000554873 METTL7BQ6UX53 244 aa15.72■□□□□ 0.11
SYNE3-203ENST00000554873 SLC16A12Q6ZSM3 486 aa15.72■□□□□ 0.11
SYNE3-203ENST00000554873 USP51Q70EK9 711 aa15.72■□□□□ 0.11
SYNE3-203ENST00000554873 SPRED1Q7Z699 444 aa15.72■□□□□ 0.11
SYNE3-203ENST00000554873 PIK3C3Q8NEB9 887 aa15.72■□□□□ 0.11
SYNE3-203ENST00000554873 CHST13Q8NET6 341 aa15.72■□□□□ 0.11
SYNE3-203ENST00000554873 HPDLQ96IR7 371 aa15.72■□□□□ 0.11
SYNE3-203ENST00000554873 COQ7Q99807 217 aa15.72■□□□□ 0.11
SYNE3-203ENST00000554873 C12orf10Q9HB07 376 aa15.72■□□□□ 0.11
SYNE3-203ENST00000554873 SPAG4Q9NPE6 437 aa15.72■□□□□ 0.11
SYNE3-203ENST00000554873 CCDC177Q9NQR7 707 aaPredicted RBP15.72■□□□□ 0.11
SYNE3-203ENST00000554873 SMPD3Q9NY59 655 aaPredicted RBP15.72■□□□□ 0.11
SYNE3-203ENST00000554873 CD300AQ9UGN4 299 aa15.72■□□□□ 0.11
SYNE3-203ENST00000554873 SARDHQ9UL12 918 aa15.72■□□□□ 0.11
SYNE3-203ENST00000554873 TNFSF13BQ9Y275 285 aa15.72■□□□□ 0.11
SYNE3-203ENST00000554873 RAP2CQ9Y3L5 183 aa15.72■□□□□ 0.11
SYNE3-203ENST00000554873 ARIH1Q9Y4X5 557 aaPredicted RBP15.72■□□□□ 0.11
SYNE3-203ENST00000554873 COPG1Q9Y678 874 aaKnown RBP15.72■□□□□ 0.11
SYNE3-203ENST00000554873 TANC1Q9C0D5 1861 aa15.72■□□□□ 0.11
SYNE3-203ENST00000554873 SCN4AP35499 1836 aa15.72■□□□□ 0.11
SYNE3-203ENST00000554873 KPNA7A9QM74 516 aa15.72■□□□□ 0.11
SYNE3-203ENST00000554873 TPSB2P20231 275 aa15.72■□□□□ 0.11
SYNE3-203ENST00000554873 GSTM2P28161 218 aa15.72■□□□□ 0.11
SYNE3-203ENST00000554873 EPHX2P34913 555 aa15.72■□□□□ 0.11
SYNE3-203ENST00000554873 BST2Q10589 180 aaKnown RBP15.72■□□□□ 0.11
SYNE3-203ENST00000554873 TPSAB1Q15661 275 aa15.72■□□□□ 0.11
SYNE3-203ENST00000554873 CYBRD1Q53TN4 286 aa15.72■□□□□ 0.11
SYNE3-203ENST00000554873 PPM1JQ5JR12 505 aa15.72■□□□□ 0.11
SYNE3-203ENST00000554873 PAGE2BQ5JRK9 111 aa15.72■□□□□ 0.11
SYNE3-203ENST00000554873 TBCELQ5QJ74 424 aa15.72■□□□□ 0.11
SYNE3-203ENST00000554873 LRRC8EQ6NSJ5 796 aa15.72■□□□□ 0.11
SYNE3-203ENST00000554873 PMF1Q6P1K2 205 aa15.72■□□□□ 0.11
SYNE3-203ENST00000554873 TRIM63Q969Q1 353 aa15.72■□□□□ 0.11
SYNE3-203ENST00000554873 AGPAT4Q9NRZ5 378 aa15.72■□□□□ 0.11
SYNE3-203ENST00000554873 DOCK1Q14185 1865 aa15.71■□□□□ 0.11
SYNE3-203ENST00000554873 WDR27A2RRH5 827 aa15.71■□□□□ 0.11
SYNE3-203ENST00000554873 KCNU1A8MYU2 1149 aa15.71■□□□□ 0.11
SYNE3-203ENST00000554873 TFE3P19532 575 aaPredicted RBP15.71■□□□□ 0.11
SYNE3-203ENST00000554873 CYP2F1P24903 491 aa15.71■□□□□ 0.11
SYNE3-203ENST00000554873 ARCN1P48444 511 aaKnown RBP15.71■□□□□ 0.11
SYNE3-203ENST00000554873 RPL14P50914 215 aaKnown RBP15.71■□□□□ 0.11
SYNE3-203ENST00000554873 MBTD1Q05BQ5 628 aa15.71■□□□□ 0.11
SYNE3-203ENST00000554873 HSPA14Q0VDF9 509 aa15.71■□□□□ 0.11
SYNE3-203ENST00000554873 SLC13A2Q13183 592 aa15.71■□□□□ 0.11
SYNE3-203ENST00000554873 HSDL1Q3SXM5 330 aa15.71■□□□□ 0.11
SYNE3-203ENST00000554873 ZCCHC8Q6NZY4 707 aaKnown RBP15.71■□□□□ 0.11
SYNE3-203ENST00000554873 SLC51BQ86UW2 128 aa15.71■□□□□ 0.11
SYNE3-203ENST00000554873 CDKL3Q8IVW4 592 aaPredicted RBP15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms