RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 FAM47E-STBD1D6RA91 191 aa14.01□□□□□ -0.17
VTI1B-204ENST00000554659 BTN3A3O00478 584 aa14.01□□□□□ -0.17
VTI1B-204ENST00000554659 PAPSS1O43252 624 aaPredicted RBP14.01□□□□□ -0.17
VTI1B-204ENST00000554659 NTSP30990 170 aa14.01□□□□□ -0.17
VTI1B-204ENST00000554659 C16orf59Q7L2K0 433 aa14.01□□□□□ -0.17
VTI1B-204ENST00000554659 MYLPFQ96A32 169 aa14.01□□□□□ -0.17
VTI1B-204ENST00000554659 SEMA3CQ99985 751 aa14.01□□□□□ -0.17
VTI1B-204ENST00000554659 VWA7Q9Y334 891 aa14.01□□□□□ -0.17
VTI1B-204ENST00000554659 MRPL42Q9Y6G3 142 aaKnown RBP14.01□□□□□ -0.17
VTI1B-204ENST00000554659 AGRPO00253 132 aa14□□□□□ -0.17
VTI1B-204ENST00000554659 PCDH8O95206 1070 aa14□□□□□ -0.17
VTI1B-204ENST00000554659 TNNI3P19429 210 aa14□□□□□ -0.17
VTI1B-204ENST00000554659 GRM5P41594 1212 aa14□□□□□ -0.17
VTI1B-204ENST00000554659 SMIM11AP58511 58 aa14□□□□□ -0.17
VTI1B-204ENST00000554659 SLC25A52Q3SY17 297 aa14□□□□□ -0.17
VTI1B-204ENST00000554659 PTPN20Q4JDL3 420 aa14□□□□□ -0.17
VTI1B-204ENST00000554659 LPCAT4Q643R3 524 aa14□□□□□ -0.17
VTI1B-204ENST00000554659 CYP20A1Q6UW02 462 aa14□□□□□ -0.17
VTI1B-204ENST00000554659 NLNQ9BYT8 704 aa14□□□□□ -0.17
VTI1B-204ENST00000554659 BCL2L14Q9BZR8 327 aa14□□□□□ -0.17
VTI1B-204ENST00000554659 WDR12Q9GZL7 423 aaKnown RBP14□□□□□ -0.17
VTI1B-204ENST00000554659 PIGUQ9H490 435 aa14□□□□□ -0.17
VTI1B-204ENST00000554659 TMEM138Q9NPI0 162 aa14□□□□□ -0.17
VTI1B-204ENST00000554659 TOR4AQ9NXH8 423 aa14□□□□□ -0.17
VTI1B-204ENST00000554659 COMMD9Q9P000 198 aa14□□□□□ -0.17
VTI1B-204ENST00000554659 CDH22Q9UJ99 828 aa14□□□□□ -0.17
VTI1B-204ENST00000554659 ETS2P15036 469 aa14□□□□□ -0.17
VTI1B-204ENST00000554659 SCNN1GP51170 649 aa14□□□□□ -0.17
VTI1B-204ENST00000554659 CERKQ8TCT0 537 aa14□□□□□ -0.17
VTI1B-204ENST00000554659 CPT1BQ92523 772 aa14□□□□□ -0.17
VTI1B-204ENST00000554659 VPS35Q96QK1 796 aa14□□□□□ -0.17
VTI1B-204ENST00000554659 ZNF222Q9UK12 451 aa14□□□□□ -0.17
VTI1B-204ENST00000554659 YDJCA8MPS7 323 aa14□□□□□ -0.17
VTI1B-204ENST00000554659 BUD23O43709 281 aaKnown RBP14□□□□□ -0.17
VTI1B-204ENST00000554659 TMCC2O75069 709 aa14□□□□□ -0.17
VTI1B-204ENST00000554659 SLC22A3O75751 556 aa14□□□□□ -0.17
VTI1B-204ENST00000554659 FGF1P05230 155 aa14□□□□□ -0.17
VTI1B-204ENST00000554659 IL12AP29459 219 aa14□□□□□ -0.17
VTI1B-204ENST00000554659 SLC26A3P40879 764 aa14□□□□□ -0.17
VTI1B-204ENST00000554659 TRAP1Q12931 704 aaKnown RBP14□□□□□ -0.17
VTI1B-204ENST00000554659 PPP1R26Q5T8A7 1209 aaPredicted RBP14□□□□□ -0.17
VTI1B-204ENST00000554659 FAM20CQ8IXL6 584 aa14□□□□□ -0.17
VTI1B-204ENST00000554659 NPAS2Q99743 824 aa14□□□□□ -0.17
VTI1B-204ENST00000554659 TIMMDC1Q9NPL8 285 aa14□□□□□ -0.17
VTI1B-204ENST00000554659 ERGIC3Q9Y282 383 aa14□□□□□ -0.17
VTI1B-204ENST00000554659 DERAQ9Y315 318 aa14□□□□□ -0.17
VTI1B-204ENST00000554659 PCDHB12Q9Y5F1 795 aa14□□□□□ -0.17
VTI1B-204ENST00000554659 UBE2QL1A1L167 161 aa14□□□□□ -0.17
VTI1B-204ENST00000554659 ANKDD1BA6NHY2 528 aa14□□□□□ -0.17
VTI1B-204ENST00000554659 WTIPA6NIX2 430 aaPredicted RBP14□□□□□ -0.17
VTI1B-204ENST00000554659 NTRK1P04629 796 aa14□□□□□ -0.17
VTI1B-204ENST00000554659 ALOX5P09917 674 aa14□□□□□ -0.17
VTI1B-204ENST00000554659 LINC00032P0C843 101 aa14□□□□□ -0.17
VTI1B-204ENST00000554659 TSPAN8P19075 237 aa14□□□□□ -0.17
VTI1B-204ENST00000554659 WEE1P30291 646 aa14□□□□□ -0.17
VTI1B-204ENST00000554659 GPR180Q86V85 440 aa14□□□□□ -0.17
VTI1B-204ENST00000554659 FAM47BQ8NA70 645 aa14□□□□□ -0.17
VTI1B-204ENST00000554659 OR52K2Q8NGK3 314 aa14□□□□□ -0.17
VTI1B-204ENST00000554659 HELQQ8TDG4 1101 aa14□□□□□ -0.17
VTI1B-204ENST00000554659 DUSP16Q9BY84 665 aa14□□□□□ -0.17
VTI1B-204ENST00000554659 ZFP14Q9HCL3 533 aa14□□□□□ -0.17
VTI1B-204ENST00000554659 SLIT3O75094 1523 aa14□□□□□ -0.17
VTI1B-204ENST00000554659 RGS20O76081 388 aa14□□□□□ -0.17
VTI1B-204ENST00000554659 C2P06681 752 aa14□□□□□ -0.17
VTI1B-204ENST00000554659 FECHP22830 423 aa14□□□□□ -0.17
VTI1B-204ENST00000554659 PRDX6P30041 224 aa14□□□□□ -0.17
VTI1B-204ENST00000554659 HADHBP55084 474 aaKnown RBP14□□□□□ -0.17
VTI1B-204ENST00000554659 SETMARQ53H47 684 aaPredicted RBP14□□□□□ -0.17
VTI1B-204ENST00000554659 PPP1R15BQ5SWA1 713 aa14□□□□□ -0.17
VTI1B-204ENST00000554659 SPATA19Q7Z5L4 167 aa14□□□□□ -0.17
VTI1B-204ENST00000554659 ITCHQ96J02 903 aa14□□□□□ -0.17
VTI1B-204ENST00000554659 SALL4Q9UJQ4 1053 aa14□□□□□ -0.17
VTI1B-204ENST00000554659 ATP6AP2A0A1C7CYW4 349 aa13.99□□□□□ -0.17
VTI1B-204ENST00000554659 DISP2A7MBM2 1401 aa13.99□□□□□ -0.17
VTI1B-204ENST00000554659 FFAR3O14843 346 aa13.99□□□□□ -0.17
VTI1B-204ENST00000554659 GPR42O15529 346 aa13.99□□□□□ -0.17
VTI1B-204ENST00000554659 ATP6AP2O75787 350 aa13.99□□□□□ -0.17
VTI1B-204ENST00000554659 CES1P23141 567 aa13.99□□□□□ -0.17
VTI1B-204ENST00000554659 CDKN2BP42772 138 aa13.99□□□□□ -0.17
VTI1B-204ENST00000554659 BRMS1LQ5PSV4 323 aa13.99□□□□□ -0.17
VTI1B-204ENST00000554659 DENND5AQ6IQ26 1287 aa13.99□□□□□ -0.17
VTI1B-204ENST00000554659 ARMCX6Q7L4S7 300 aa13.99□□□□□ -0.17
VTI1B-204ENST00000554659 PEG10Q86TG7 708 aaKnown RBP13.99□□□□□ -0.17
VTI1B-204ENST00000554659 XYLT1Q86Y38 959 aa13.99□□□□□ -0.17
VTI1B-204ENST00000554659 SPATA6LQ8N4H0 392 aa13.99□□□□□ -0.17
VTI1B-204ENST00000554659 TOP6BLQ8N6T0 577 aa13.99□□□□□ -0.17
VTI1B-204ENST00000554659 SOCS4Q8WXH5 440 aa13.99□□□□□ -0.17
VTI1B-204ENST00000554659 SPATA5L1Q9BVQ7 753 aa13.99□□□□□ -0.17
VTI1B-204ENST00000554659 MUC13Q9H3R2 512 aa13.99□□□□□ -0.17
VTI1B-204ENST00000554659 CAB39LQ9H9S4 337 aa13.99□□□□□ -0.17
VTI1B-204ENST00000554659 DNMT3LQ9UJW3 386 aa13.99□□□□□ -0.17
VTI1B-204ENST00000554659 SLC12A4Q9UP95 1085 aa13.99□□□□□ -0.17
VTI1B-204ENST00000554659 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.99□□□□□ -0.17
VTI1B-204ENST00000554659 OR6A2O95222 327 aa13.99□□□□□ -0.17
VTI1B-204ENST00000554659 SNHG28P0DPA3 235 aa13.99□□□□□ -0.17
VTI1B-204ENST00000554659 HIRAP54198 1017 aaPredicted RBP13.99□□□□□ -0.17
VTI1B-204ENST00000554659 HSPA14Q0VDF9 509 aa13.99□□□□□ -0.17
VTI1B-204ENST00000554659 GIPC3Q8TF64 312 aa13.99□□□□□ -0.17
VTI1B-204ENST00000554659 NID2Q14112 1375 aa13.99□□□□□ -0.17
VTI1B-204ENST00000554659 TCRBV7S2A1N4TA0A589 114 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms