RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 DPPA4Q7L190 304 aa10.72□□□□□ -0.69
SHMT2-213ENST00000554600 GLRX5Q86SX6 157 aa10.72□□□□□ -0.69
SHMT2-213ENST00000554600 KIAA1328Q86T90 577 aa10.72□□□□□ -0.69
SHMT2-213ENST00000554600 PARGQ86W56 976 aa10.72□□□□□ -0.69
SHMT2-213ENST00000554600 CCDC13Q8IYE1 715 aa10.72□□□□□ -0.69
SHMT2-213ENST00000554600 CENPTQ96BT3 561 aa10.72□□□□□ -0.69
SHMT2-213ENST00000554600 ECHDC3Q96DC8 303 aa10.72□□□□□ -0.69
SHMT2-213ENST00000554600 NSMCE3Q96MG7 304 aa10.72□□□□□ -0.69
SHMT2-213ENST00000554600 CAAP1Q9H8G2 361 aa10.72□□□□□ -0.69
SHMT2-213ENST00000554600 MBNL1Q9NR56 388 aaKnown RBP10.72□□□□□ -0.69
SHMT2-213ENST00000554600 UCKL1Q9NWZ5 548 aa10.72□□□□□ -0.69
SHMT2-213ENST00000554600 DTLQ9NZJ0 730 aa10.72□□□□□ -0.69
SHMT2-213ENST00000554600 B4GALT6Q9UBX8 382 aa10.72□□□□□ -0.69
SHMT2-213ENST00000554600 KLK13Q9UKR3 277 aa10.72□□□□□ -0.69
SHMT2-213ENST00000554600 ALG6Q9Y672 507 aa10.72□□□□□ -0.69
SHMT2-213ENST00000554600 SPTY2D1-AS1A0A0U1RR47 76 aa10.71□□□□□ -0.69
SHMT2-213ENST00000554600 A0A1W2PQ67 120 aa10.71□□□□□ -0.69
SHMT2-213ENST00000554600 GOLGA6CA6NDK9 693 aa10.71□□□□□ -0.69
SHMT2-213ENST00000554600 GOLGA6BA6NDN3 693 aa10.71□□□□□ -0.69
SHMT2-213ENST00000554600 NEMP2A6NFY4 417 aa10.71□□□□□ -0.69
SHMT2-213ENST00000554600 KCNK1O00180 336 aa10.71□□□□□ -0.69
SHMT2-213ENST00000554600 PSTPIP1O43586 416 aa10.71□□□□□ -0.69
SHMT2-213ENST00000554600 RECQL5O94762 991 aaPredicted RBP10.71□□□□□ -0.69
SHMT2-213ENST00000554600 LCA5LO95447 670 aa10.71□□□□□ -0.69
SHMT2-213ENST00000554600 JCHAINP01591 159 aa10.71□□□□□ -0.69
SHMT2-213ENST00000554600 GOLGA6DP0CG33 693 aa10.71□□□□□ -0.69
SHMT2-213ENST00000554600 ALPPL2P10696 532 aa10.71□□□□□ -0.69
SHMT2-213ENST00000554600 ZFXP17010 805 aaPredicted RBP10.71□□□□□ -0.69
SHMT2-213ENST00000554600 JUNDP17535 347 aa10.71□□□□□ -0.69
SHMT2-213ENST00000554600 CTPS1P17812 591 aa10.71□□□□□ -0.69
SHMT2-213ENST00000554600 CR2P20023 1033 aa10.71□□□□□ -0.69
SHMT2-213ENST00000554600 CA4P22748 312 aa10.71□□□□□ -0.69
SHMT2-213ENST00000554600 DGKAP23743 735 aa10.71□□□□□ -0.69
SHMT2-213ENST00000554600 YPEL5P62699 121 aa10.71□□□□□ -0.69
SHMT2-213ENST00000554600 SLC10A2Q12908 348 aaPredicted RBP10.71□□□□□ -0.69
SHMT2-213ENST00000554600 RALGDSQ12967 914 aa10.71□□□□□ -0.69
SHMT2-213ENST00000554600 COL9A2Q14055 689 aaPredicted RBP10.71□□□□□ -0.69
SHMT2-213ENST00000554600 ARHGEF7Q14155 803 aa10.71□□□□□ -0.69
SHMT2-213ENST00000554600 TCEAL1Q15170 157 aa10.71□□□□□ -0.69
SHMT2-213ENST00000554600 WSCD2Q2TBF2 565 aa10.71□□□□□ -0.69
SHMT2-213ENST00000554600 TPRG1LQ5T0D9 272 aa10.71□□□□□ -0.69
SHMT2-213ENST00000554600 FAXCQ5TGI0 409 aa10.71□□□□□ -0.69
SHMT2-213ENST00000554600 MFSD7Q6UXD7 560 aa10.71□□□□□ -0.69
SHMT2-213ENST00000554600 NPNTQ6UXI9 565 aa10.71□□□□□ -0.69
SHMT2-213ENST00000554600 LIPIQ6XZB0 460 aa10.71□□□□□ -0.69
SHMT2-213ENST00000554600 RAB44Q7Z6P3 723 aaPredicted RBP10.71□□□□□ -0.69
SHMT2-213ENST00000554600 DAAM2Q86T65 1068 aa10.71□□□□□ -0.69
SHMT2-213ENST00000554600 NDUFAF2Q8N183 169 aa10.71□□□□□ -0.69
SHMT2-213ENST00000554600 SLC25A45Q8N413 288 aa10.71□□□□□ -0.69
SHMT2-213ENST00000554600 PLD5Q8N7P1 536 aa10.71□□□□□ -0.69
SHMT2-213ENST00000554600 TP53I13Q8NBR0 393 aaPredicted RBP10.71□□□□□ -0.69
SHMT2-213ENST00000554600 LMX1AQ8TE12 382 aa10.71□□□□□ -0.69
SHMT2-213ENST00000554600 ADAMTS14Q8WXS8 1223 aa10.71□□□□□ -0.69
SHMT2-213ENST00000554600 IFT43Q96FT9 208 aa10.71□□□□□ -0.69
SHMT2-213ENST00000554600 TSGA13Q96PP4 275 aa10.71□□□□□ -0.69
SHMT2-213ENST00000554600 LGMNQ99538 433 aa10.71□□□□□ -0.69
SHMT2-213ENST00000554600 BAG1Q99933 345 aaPredicted RBP10.71□□□□□ -0.69
SHMT2-213ENST00000554600 GOLGA6AQ9NYA3 693 aa10.71□□□□□ -0.69
SHMT2-213ENST00000554600 PHTF1Q9UMS5 762 aa10.71□□□□□ -0.69
SHMT2-213ENST00000554600 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.71□□□□□ -0.69
SHMT2-213ENST00000554600 RAI2Q9Y5P3 530 aa10.71□□□□□ -0.69
SHMT2-213ENST00000554600 A0A0A6YYK5 440 aaPredicted RBP10.7□□□□□ -0.7
SHMT2-213ENST00000554600 C3orf70A6NLC5 250 aaPredicted RBP10.7□□□□□ -0.7
SHMT2-213ENST00000554600 ZNF487B1APH4 448 aa10.7□□□□□ -0.7
SHMT2-213ENST00000554600 TRIM38O00635 465 aa10.7□□□□□ -0.7
SHMT2-213ENST00000554600 PPP1R12AO14974 1030 aaPredicted RBP10.7□□□□□ -0.7
SHMT2-213ENST00000554600 HTRA2O43464 458 aaPredicted RBP10.7□□□□□ -0.7
SHMT2-213ENST00000554600 SIGLEC6O43699 453 aa10.7□□□□□ -0.7
SHMT2-213ENST00000554600 PGLSO95336 258 aa10.7□□□□□ -0.7
SHMT2-213ENST00000554600 CSF2P04141 144 aa10.7□□□□□ -0.7
SHMT2-213ENST00000554600 HLA-DQB2P05538 268 aa10.7□□□□□ -0.7
SHMT2-213ENST00000554600 NME1P15531 152 aaKnown RBP10.7□□□□□ -0.7
SHMT2-213ENST00000554600 CES1P23141 567 aa10.7□□□□□ -0.7
SHMT2-213ENST00000554600 HTR1BP28222 390 aa10.7□□□□□ -0.7
SHMT2-213ENST00000554600 VIPR1P32241 457 aa10.7□□□□□ -0.7
SHMT2-213ENST00000554600 HADHBP55084 474 aaKnown RBP10.7□□□□□ -0.7
SHMT2-213ENST00000554600 PFN3P60673 137 aa10.7□□□□□ -0.7
SHMT2-213ENST00000554600 PPIDQ08752 370 aaKnown RBP10.7□□□□□ -0.7
SHMT2-213ENST00000554600 EIF2B5Q13144 721 aaKnown RBP10.7□□□□□ -0.7
SHMT2-213ENST00000554600 TFDP2Q14188 446 aa10.7□□□□□ -0.7
SHMT2-213ENST00000554600 INPP5AQ14642 412 aa10.7□□□□□ -0.7
SHMT2-213ENST00000554600 PDK1Q15118 436 aa10.7□□□□□ -0.7
SHMT2-213ENST00000554600 TCEA2Q15560 299 aa10.7□□□□□ -0.7
SHMT2-213ENST00000554600 SLC9A4Q6AI14 798 aa10.7□□□□□ -0.7
SHMT2-213ENST00000554600 C11orf63Q6NUN7 778 aa10.7□□□□□ -0.7
SHMT2-213ENST00000554600 DHRS13Q6UX07 377 aa10.7□□□□□ -0.7
SHMT2-213ENST00000554600 RAD9BQ6WBX8 426 aa10.7□□□□□ -0.7
SHMT2-213ENST00000554600 SPOCD1Q6ZMY3 1216 aa10.7□□□□□ -0.7
SHMT2-213ENST00000554600 MACC1Q6ZN28 852 aa10.7□□□□□ -0.7
SHMT2-213ENST00000554600 USP45Q70EL2 814 aa10.7□□□□□ -0.7
SHMT2-213ENST00000554600 B4GALNT4Q76KP1 1039 aa10.7□□□□□ -0.7
SHMT2-213ENST00000554600 KANSL1Q7Z3B3 1105 aa10.7□□□□□ -0.7
SHMT2-213ENST00000554600 RD3Q7Z3Z2 195 aa10.7□□□□□ -0.7
SHMT2-213ENST00000554600 VSIG1Q86XK7 387 aa10.7□□□□□ -0.7
SHMT2-213ENST00000554600 HID1Q8IV36 788 aa10.7□□□□□ -0.7
SHMT2-213ENST00000554600 PHACTR4Q8IZ21 702 aa10.7□□□□□ -0.7
SHMT2-213ENST00000554600 RBFAQ8N0V3 343 aa10.7□□□□□ -0.7
SHMT2-213ENST00000554600 TEX26Q8N6G2 289 aa10.7□□□□□ -0.7
SHMT2-213ENST00000554600 ACRBPQ8NEB7 543 aa10.7□□□□□ -0.7
SHMT2-213ENST00000554600 TPCN2Q8NHX9 752 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms