RNA–Protein interactions for RNA: ENST00000554040.5

ATXN3-224, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-224ENST00000554040 LRRC27Q9C0I9 530 aa7□□□□□ -1.29
ATXN3-224ENST00000554040 B3GNT4Q9C0J1 378 aa7□□□□□ -1.29
ATXN3-224ENST00000554040 TNMDQ9H2S6 317 aa7□□□□□ -1.29
ATXN3-224ENST00000554040 LRRC4Q9HBW1 653 aa7□□□□□ -1.29
ATXN3-224ENST00000554040 DMAC2Q9NW81 257 aa7□□□□□ -1.29
ATXN3-224ENST00000554040 SPASTQ9UBP0 616 aa7□□□□□ -1.29
ATXN3-224ENST00000554040 IPO11Q9UI26 975 aaKnown RBP7□□□□□ -1.29
ATXN3-224ENST00000554040 FBXO2Q9UK22 296 aaPredicted RBP7□□□□□ -1.29
ATXN3-224ENST00000554040 ESPL1Q14674 2120 aa7□□□□□ -1.29
ATXN3-224ENST00000554040 DNHD1Q96M86 4753 aa6.99□□□□□ -1.29
ATXN3-224ENST00000554040 ZFC3H1O60293 1989 aaKnown RBP6.99□□□□□ -1.29
ATXN3-224ENST00000554040 COL27A1Q8IZC6 1860 aaPredicted RBP6.99□□□□□ -1.29
ATXN3-224ENST00000554040 A0A1W2PQM1 296 aa6.99□□□□□ -1.29
ATXN3-224ENST00000554040 VPS37CA5D8V6 355 aaPredicted RBP6.99□□□□□ -1.29
ATXN3-224ENST00000554040 D6RAR5 112 aa6.99□□□□□ -1.29
ATXN3-224ENST00000554040 LMO7DNF2Z398 122 aa6.99□□□□□ -1.29
ATXN3-224ENST00000554040 YY2O15391 372 aa6.99□□□□□ -1.29
ATXN3-224ENST00000554040 PCDH8O95206 1070 aa6.99□□□□□ -1.29
ATXN3-224ENST00000554040 PAK4O96013 591 aaPredicted RBP6.99□□□□□ -1.29
ATXN3-224ENST00000554040 RPLP0P05388 317 aaKnown RBP6.99□□□□□ -1.29
ATXN3-224ENST00000554040 ANXA6P08133 673 aa6.99□□□□□ -1.29
ATXN3-224ENST00000554040 TFE3P19532 575 aaPredicted RBP6.99□□□□□ -1.29
ATXN3-224ENST00000554040 ITIH1P19827 911 aa6.99□□□□□ -1.29
ATXN3-224ENST00000554040 CFPP27918 469 aa6.99□□□□□ -1.29
ATXN3-224ENST00000554040 GJB2P29033 226 aa6.99□□□□□ -1.29
ATXN3-224ENST00000554040 ETV5P41161 510 aa6.99□□□□□ -1.29
ATXN3-224ENST00000554040 PIK3CAP42336 1068 aa6.99□□□□□ -1.29
ATXN3-224ENST00000554040 LIG3P49916 1009 aa6.99□□□□□ -1.29
ATXN3-224ENST00000554040 PLK1P53350 603 aa6.99□□□□□ -1.29
ATXN3-224ENST00000554040 ZFP36L1Q07352 338 aaKnown RBP6.99□□□□□ -1.29
ATXN3-224ENST00000554040 ADIGQ0VDE8 80 aa6.99□□□□□ -1.29
ATXN3-224ENST00000554040 C1orf61Q13536 156 aa6.99□□□□□ -1.29
ATXN3-224ENST00000554040 PDE1CQ14123 709 aaPredicted RBP6.99□□□□□ -1.29
ATXN3-224ENST00000554040 FGL2Q14314 439 aa6.99□□□□□ -1.29
ATXN3-224ENST00000554040 DLG2Q15700 870 aa6.99□□□□□ -1.29
ATXN3-224ENST00000554040 KNOP1Q1ED39 458 aaKnown RBP6.99□□□□□ -1.29
ATXN3-224ENST00000554040 ACCSLQ4AC99 568 aa6.99□□□□□ -1.29
ATXN3-224ENST00000554040 CRYBG3Q68DQ2 2970 aa6.99□□□□□ -1.29
ATXN3-224ENST00000554040 CNNM4Q6P4Q7 775 aa6.99□□□□□ -1.29
ATXN3-224ENST00000554040 BRAPQ7Z569 592 aa6.99□□□□□ -1.29
ATXN3-224ENST00000554040 SCML4Q8N228 414 aa6.99□□□□□ -1.29
ATXN3-224ENST00000554040 SLC4A11Q8NBS3 891 aa6.99□□□□□ -1.29
ATXN3-224ENST00000554040 C9orf43Q8TAL5 461 aaPredicted RBP6.99□□□□□ -1.29
ATXN3-224ENST00000554040 GOLGA5Q8TBA6 731 aa6.99□□□□□ -1.29
ATXN3-224ENST00000554040 SSC4DQ8WTU2 575 aa6.99□□□□□ -1.29
ATXN3-224ENST00000554040 TMEM174Q8WUU8 243 aa6.99□□□□□ -1.29
ATXN3-224ENST00000554040 ERCC4Q92889 916 aaPredicted RBP6.99□□□□□ -1.29
ATXN3-224ENST00000554040 FCRL2Q96LA5 508 aaPredicted RBP6.99□□□□□ -1.29
ATXN3-224ENST00000554040 TBATAQ96M53 351 aa6.99□□□□□ -1.29
ATXN3-224ENST00000554040 CATSPER2Q96P56 530 aa6.99□□□□□ -1.29
ATXN3-224ENST00000554040 ALPK1Q96QP1 1244 aa6.99□□□□□ -1.29
ATXN3-224ENST00000554040 CMKLR1Q99788 373 aa6.99□□□□□ -1.29
ATXN3-224ENST00000554040 BACH2Q9BYV9 841 aa6.99□□□□□ -1.29
ATXN3-224ENST00000554040 IMPG2Q9BZV3 1241 aa6.99□□□□□ -1.29
ATXN3-224ENST00000554040 LRRN3Q9H3W5 708 aa6.99□□□□□ -1.29
ATXN3-224ENST00000554040 CNGB3Q9NQW8 809 aa6.99□□□□□ -1.29
ATXN3-224ENST00000554040 KBTBD4Q9NVX7 518 aa6.99□□□□□ -1.29
ATXN3-224ENST00000554040 CLIC4Q9Y696 253 aa6.99□□□□□ -1.29
ATXN3-224ENST00000554040 MTORP42345 2549 aa6.99□□□□□ -1.29
ATXN3-224ENST00000554040 STMND1H3BQB6 276 aa6.98□□□□□ -1.29
ATXN3-224ENST00000554040 RAD51BO15315 384 aa6.98□□□□□ -1.29
ATXN3-224ENST00000554040 CTSLP07711 333 aa6.98□□□□□ -1.29
ATXN3-224ENST00000554040 KRT7P08729 469 aa6.98□□□□□ -1.29
ATXN3-224ENST00000554040 PDGFRAP16234 1089 aa6.98□□□□□ -1.29
ATXN3-224ENST00000554040 TNFRSF8P28908 595 aa6.98□□□□□ -1.29
ATXN3-224ENST00000554040 CHRNA3P32297 505 aa6.98□□□□□ -1.29
ATXN3-224ENST00000554040 KIR3DL1P43629 444 aa6.98□□□□□ -1.29
ATXN3-224ENST00000554040 NUMBP49757 651 aa6.98□□□□□ -1.29
ATXN3-224ENST00000554040 MAPK10P53779 464 aa6.98□□□□□ -1.29
ATXN3-224ENST00000554040 RAD23BP54727 409 aa6.98□□□□□ -1.29
ATXN3-224ENST00000554040 MLLT10P55197 1068 aa6.98□□□□□ -1.29
ATXN3-224ENST00000554040 DAOAP59103 153 aa6.98□□□□□ -1.29
ATXN3-224ENST00000554040 PFN3P60673 137 aa6.98□□□□□ -1.29
ATXN3-224ENST00000554040 RPS21P63220 83 aaKnown RBP6.98□□□□□ -1.29
ATXN3-224ENST00000554040 AMPD3Q01432 767 aa6.98□□□□□ -1.29
ATXN3-224ENST00000554040 KLRB1Q12918 225 aa6.98□□□□□ -1.29
ATXN3-224ENST00000554040 RALGPS1Q5JS13 557 aa6.98□□□□□ -1.29
ATXN3-224ENST00000554040 TPRG1LQ5T0D9 272 aa6.98□□□□□ -1.29
ATXN3-224ENST00000554040 C1orf220Q5T0J3 134 aa6.98□□□□□ -1.29
ATXN3-224ENST00000554040 MEI1Q5TIA1 1274 aa6.98□□□□□ -1.29
ATXN3-224ENST00000554040 ERN2Q76MJ5 926 aaKnown RBP6.98□□□□□ -1.29
ATXN3-224ENST00000554040 LGI2Q8N0V4 545 aa6.98□□□□□ -1.29
ATXN3-224ENST00000554040 SIX6OS1Q8N1H7 587 aa6.98□□□□□ -1.29
ATXN3-224ENST00000554040 SDR16C5Q8N3Y7 309 aa6.98□□□□□ -1.29
ATXN3-224ENST00000554040 TTC39CQ8N584 583 aa6.98□□□□□ -1.29
ATXN3-224ENST00000554040 PDILTQ8N807 584 aa6.98□□□□□ -1.29
ATXN3-224ENST00000554040 ARL10Q8N8L6 244 aa6.98□□□□□ -1.29
ATXN3-224ENST00000554040 TMIEQ8NEW7 156 aa6.98□□□□□ -1.29
ATXN3-224ENST00000554040 TAS1R2Q8TE23 839 aa6.98□□□□□ -1.29
ATXN3-224ENST00000554040 JPH3Q8WXH2 748 aaPredicted RBP6.98□□□□□ -1.29
ATXN3-224ENST00000554040 KCTD13Q8WZ19 329 aa6.98□□□□□ -1.29
ATXN3-224ENST00000554040 NKD1Q969G9 470 aa6.98□□□□□ -1.29
ATXN3-224ENST00000554040 SLC39A13Q96H72 371 aa6.98□□□□□ -1.29
ATXN3-224ENST00000554040 FAXDC2Q96IV6 333 aa6.98□□□□□ -1.29
ATXN3-224ENST00000554040 FEM1CQ96JP0 617 aa6.98□□□□□ -1.29
ATXN3-224ENST00000554040 COX4I2Q96KJ9 171 aa6.98□□□□□ -1.29
ATXN3-224ENST00000554040 LENG8Q96PV6 779 aaPredicted RBP6.98□□□□□ -1.29
ATXN3-224ENST00000554040 PPP1R9BQ96SB3 815 aa6.98□□□□□ -1.29
ATXN3-224ENST00000554040 C7orf25Q9BPX7 421 aa6.98□□□□□ -1.29
ATXN3-224ENST00000554040 HDAC8Q9BY41 377 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms