RNA–Protein interactions for RNA: ENST00000553945.1

NEK9-203, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 786 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-203ENST00000553945 SPOCK2Q92563 424 aa23.39■■□□□ 1.33
NEK9-203ENST00000553945 BMFQ96LC9 184 aa23.39■■□□□ 1.33
NEK9-203ENST00000553945 B4GALT6Q9UBX8 382 aa23.39■■□□□ 1.33
NEK9-203ENST00000553945 LRRK1Q38SD2 2015 aa23.38■■□□□ 1.33
NEK9-203ENST00000553945 DFNA5O60443 496 aa23.38■■□□□ 1.33
NEK9-203ENST00000553945 PTMAP06454 111 aaKnown RBP23.38■■□□□ 1.33
NEK9-203ENST00000553945 PDHA1P08559 390 aa23.38■■□□□ 1.33
NEK9-203ENST00000553945 ZNF883P0CG24 379 aa23.38■■□□□ 1.33
NEK9-203ENST00000553945 CA4P22748 312 aa23.38■■□□□ 1.33
NEK9-203ENST00000553945 NFKBIAP25963 317 aa23.38■■□□□ 1.33
NEK9-203ENST00000553945 CD86P42081 329 aa23.38■■□□□ 1.33
NEK9-203ENST00000553945 IL9RQ01113 521 aa23.38■■□□□ 1.33
NEK9-203ENST00000553945 RALGDSQ12967 914 aa23.38■■□□□ 1.33
NEK9-203ENST00000553945 ZNF662Q6ZS27 426 aa23.38■■□□□ 1.33
NEK9-203ENST00000553945 Q6ZSR6 202 aa23.38■■□□□ 1.33
NEK9-203ENST00000553945 HES6Q96HZ4 224 aa23.38■■□□□ 1.33
NEK9-203ENST00000553945 ELF4Q99607 663 aaPredicted RBP23.38■■□□□ 1.33
NEK9-203ENST00000553945 CHKBQ9Y259 395 aa23.38■■□□□ 1.33
NEK9-203ENST00000553945 HACD1B0YJ81 288 aa23.37■■□□□ 1.33
NEK9-203ENST00000553945 H7C0C1 242 aa23.37■■□□□ 1.33
NEK9-203ENST00000553945 TJP3O95049 919 aa23.37■■□□□ 1.33
NEK9-203ENST00000553945 ELFN1P0C7U0 828 aa23.37■■□□□ 1.33
NEK9-203ENST00000553945 CTPS1P17812 591 aa23.37■■□□□ 1.33
NEK9-203ENST00000553945 ATP5OP48047 213 aa23.37■■□□□ 1.33
NEK9-203ENST00000553945 CCT8P50990 548 aa23.37■■□□□ 1.33
NEK9-203ENST00000553945 NOMO1Q15155 1222 aa23.37■■□□□ 1.33
NEK9-203ENST00000553945 KYAT3Q6YP21 454 aaKnown RBP23.37■■□□□ 1.33
NEK9-203ENST00000553945 DEFB124Q8NES8 71 aa23.37■■□□□ 1.33
NEK9-203ENST00000553945 FAM174AQ8TBP5 190 aa23.37■■□□□ 1.33
NEK9-203ENST00000553945 CENPTQ96BT3 561 aa23.37■■□□□ 1.33
NEK9-203ENST00000553945 QKIQ96PU8 341 aaKnown RBP eCLIP23.37■■□□□ 1.33
NEK9-203ENST00000553945 ERVMER34-1Q9H9K5 563 aa23.37■■□□□ 1.33
NEK9-203ENST00000553945 PPP2R2CQ9Y2T4 447 aa23.37■■□□□ 1.33
NEK9-203ENST00000553945 A0A1B0GTQ1 180 aa23.36■■□□□ 1.33
NEK9-203ENST00000553945 CFAP69A5D8W1 941 aa23.36■■□□□ 1.33
NEK9-203ENST00000553945 MTSS1O43312 755 aa23.36■■□□□ 1.33
NEK9-203ENST00000553945 FZD6O60353 706 aa23.36■■□□□ 1.33
NEK9-203ENST00000553945 MMP2P08253 660 aa23.36■■□□□ 1.33
NEK9-203ENST00000553945 PTPN3P26045 913 aa23.36■■□□□ 1.33
NEK9-203ENST00000553945 VIPR1P32241 457 aa23.36■■□□□ 1.33
NEK9-203ENST00000553945 EPHB1P54762 984 aa23.36■■□□□ 1.33
NEK9-203ENST00000553945 SKOR1P84550 965 aa23.36■■□□□ 1.33
NEK9-203ENST00000553945 OTUD4Q01804 1114 aaKnown RBP23.36■■□□□ 1.33
NEK9-203ENST00000553945 XRCC4Q13426 336 aa23.36■■□□□ 1.33
NEK9-203ENST00000553945 LRRC14Q15048 493 aa23.36■■□□□ 1.33
NEK9-203ENST00000553945 PTPRRQ15256 657 aa23.36■■□□□ 1.33
NEK9-203ENST00000553945 TEX44Q53QW1 395 aa23.36■■□□□ 1.33
NEK9-203ENST00000553945 PPM1JQ5JR12 505 aa23.36■■□□□ 1.33
NEK9-203ENST00000553945 LIPIQ6XZB0 460 aa23.36■■□□□ 1.33
NEK9-203ENST00000553945 USP45Q70EL2 814 aa23.36■■□□□ 1.33
NEK9-203ENST00000553945 NDUFAF2Q8N183 169 aa23.36■■□□□ 1.33
NEK9-203ENST00000553945 OXR1Q8N573 874 aa23.36■■□□□ 1.33
NEK9-203ENST00000553945 TP53I13Q8NBR0 393 aaPredicted RBP23.36■■□□□ 1.33
NEK9-203ENST00000553945 ACTL9Q8TC94 416 aa23.36■■□□□ 1.33
NEK9-203ENST00000553945 PIH1D2Q8WWB5 315 aa23.36■■□□□ 1.33
NEK9-203ENST00000553945 RBM15Q96T37 977 aaKnown RBP eCLIP23.36■■□□□ 1.33
NEK9-203ENST00000553945 TDRD1Q9BXT4 1180 aaKnown RBP23.36■■□□□ 1.33
NEK9-203ENST00000553945 GLOD4Q9HC38 313 aa23.36■■□□□ 1.33
NEK9-203ENST00000553945 PCDH9Q9HC56 1237 aa23.36■■□□□ 1.33
NEK9-203ENST00000553945 MBNL1Q9NR56 388 aaKnown RBP23.36■■□□□ 1.33
NEK9-203ENST00000553945 ASCC3Q8N3C0 2202 aaKnown RBP23.35■■□□□ 1.33
NEK9-203ENST00000553945 GOLGA8CPA6NN73 597 aa23.35■■□□□ 1.33
NEK9-203ENST00000553945 SH3BP5O60239 455 aa23.35■■□□□ 1.33
NEK9-203ENST00000553945 CYP2A6P11509 494 aaPredicted RBP23.35■■□□□ 1.33
NEK9-203ENST00000553945 CSRP1P21291 193 aaKnown RBP23.35■■□□□ 1.33
NEK9-203ENST00000553945 IGFALSP35858 605 aa23.35■■□□□ 1.33
NEK9-203ENST00000553945 RABIFP47224 123 aa23.35■■□□□ 1.33
NEK9-203ENST00000553945 ARRB1P49407 418 aaPredicted RBP23.35■■□□□ 1.33
NEK9-203ENST00000553945 NOVA1P51513 510 aaKnown RBP23.35■■□□□ 1.33
NEK9-203ENST00000553945 WASHC5Q12768 1159 aa23.35■■□□□ 1.33
NEK9-203ENST00000553945 IRF4Q15306 451 aa23.35■■□□□ 1.33
NEK9-203ENST00000553945 PSAPL1Q6NUJ1 521 aa23.35■■□□□ 1.33
NEK9-203ENST00000553945 KDM7AQ6ZMT4 941 aa23.35■■□□□ 1.33
NEK9-203ENST00000553945 PIP4P1Q86T03 277 aa23.35■■□□□ 1.33
NEK9-203ENST00000553945 NAXDQ8IW45 347 aa23.35■■□□□ 1.33
NEK9-203ENST00000553945 SETD7Q8WTS6 366 aaKnown RBP23.35■■□□□ 1.33
NEK9-203ENST00000553945 HTR3CQ8WXA8 447 aa23.35■■□□□ 1.33
NEK9-203ENST00000553945 SCRN2Q96FV2 425 aa23.35■■□□□ 1.33
NEK9-203ENST00000553945 IMP4Q96G21 291 aaKnown RBP23.35■■□□□ 1.33
NEK9-203ENST00000553945 TEKT5Q96M29 485 aa23.35■■□□□ 1.33
NEK9-203ENST00000553945 CAMK1GQ96NX5 476 aa23.35■■□□□ 1.33
NEK9-203ENST00000553945 ALS2CR12Q96Q35 445 aa23.35■■□□□ 1.33
NEK9-203ENST00000553945 FAM118BQ9BPY3 351 aa23.35■■□□□ 1.33
NEK9-203ENST00000553945 SLC25A51Q9H1U9 297 aa23.35■■□□□ 1.33
NEK9-203ENST00000553945 SLC32A1Q9H598 525 aa23.35■■□□□ 1.33
NEK9-203ENST00000553945 PCDHGB2Q9Y5G2 931 aa23.35■■□□□ 1.33
NEK9-203ENST00000553945 NPIPB15A6NHN6 443 aaPredicted RBP23.34■■□□□ 1.33
NEK9-203ENST00000553945 KCNK5O95279 499 aa23.34■■□□□ 1.33
NEK9-203ENST00000553945 ALPIP09923 528 aa23.34■■□□□ 1.33
NEK9-203ENST00000553945 EIF3EP60228 445 aaKnown RBP23.34■■□□□ 1.33
NEK9-203ENST00000553945 SUZ12Q15022 739 aaKnown RBP23.34■■□□□ 1.33
NEK9-203ENST00000553945 ACOX1Q15067 660 aa23.34■■□□□ 1.33
NEK9-203ENST00000553945 CNGA3Q16281 694 aa23.34■■□□□ 1.33
NEK9-203ENST00000553945 WSCD2Q2TBF2 565 aa23.34■■□□□ 1.33
NEK9-203ENST00000553945 DENND2CQ68D51 928 aa23.34■■□□□ 1.33
NEK9-203ENST00000553945 DCP2Q8IU60 420 aaKnown RBP23.34■■□□□ 1.33
NEK9-203ENST00000553945 SLC22A18ASQ8N1D0 253 aa23.34■■□□□ 1.33
NEK9-203ENST00000553945 LPCAT1Q8NF37 534 aa23.34■■□□□ 1.33
NEK9-203ENST00000553945 SMIM14Q96QK8 99 aa23.34■■□□□ 1.33
NEK9-203ENST00000553945 C10orf88Q9H8K7 445 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms