RNA–Protein interactions for RNA: ENST00000553930.5

SDR39U1-206, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 5 BASIC

Gene SDR39U1, Length 1,325 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-206ENST00000553930 PBX1P40424 430 aa17.64■□□□□ 0.41
SDR39U1-206ENST00000553930 LSSP48449 732 aa17.64■□□□□ 0.41
SDR39U1-206ENST00000553930 SRP54P61011 504 aaKnown RBP17.64■□□□□ 0.41
SDR39U1-206ENST00000553930 GABREP78334 506 aa17.64■□□□□ 0.41
SDR39U1-206ENST00000553930 SLC10A7Q0GE19 358 aa17.64■□□□□ 0.41
SDR39U1-206ENST00000553930 ISXQ2M1V0 245 aa17.64■□□□□ 0.41
SDR39U1-206ENST00000553930 PERM1Q5SV97 790 aa17.64■□□□□ 0.41
SDR39U1-206ENST00000553930 LVRNQ6Q4G3 990 aa17.64■□□□□ 0.41
SDR39U1-206ENST00000553930 LIPIQ6XZB0 460 aa17.64■□□□□ 0.41
SDR39U1-206ENST00000553930 DPPA4Q7L190 304 aa17.64■□□□□ 0.41
SDR39U1-206ENST00000553930 SDR16C5Q8N3Y7 309 aa17.64■□□□□ 0.41
SDR39U1-206ENST00000553930 NIPA2Q8N8Q9 360 aa17.64■□□□□ 0.41
SDR39U1-206ENST00000553930 SCG3Q8WXD2 468 aaKnown RBP17.64■□□□□ 0.41
SDR39U1-206ENST00000553930 GRAMD1AQ96CP6 724 aa17.64■□□□□ 0.41
SDR39U1-206ENST00000553930 ZNF578Q96N58 590 aaPredicted RBP17.64■□□□□ 0.41
SDR39U1-206ENST00000553930 CSPG4P5Q96PW8 444 aa17.64■□□□□ 0.41
SDR39U1-206ENST00000553930 THAP2Q9H0W7 228 aa17.64■□□□□ 0.41
SDR39U1-206ENST00000553930 POLR1BQ9H9Y6 1135 aa17.64■□□□□ 0.41
SDR39U1-206ENST00000553930 KLQ9UEF7 1012 aa17.64■□□□□ 0.41
SDR39U1-206ENST00000553930 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.63■□□□□ 0.41
SDR39U1-206ENST00000553930 TCEA3O75764 348 aa17.63■□□□□ 0.41
SDR39U1-206ENST00000553930 RECQL5O94762 991 aaPredicted RBP17.63■□□□□ 0.41
SDR39U1-206ENST00000553930 PEX11BO96011 259 aa17.63■□□□□ 0.41
SDR39U1-206ENST00000553930 SERPING1P05155 500 aa17.63■□□□□ 0.41
SDR39U1-206ENST00000553930 RARAP10276 462 aa17.63■□□□□ 0.41
SDR39U1-206ENST00000553930 AMPD1P23109 780 aa17.63■□□□□ 0.41
SDR39U1-206ENST00000553930 HSPA9P38646 679 aaKnown RBP17.63■□□□□ 0.41
SDR39U1-206ENST00000553930 UBASH3AP57075 661 aa17.63■□□□□ 0.41
SDR39U1-206ENST00000553930 COL9A2Q14055 689 aaPredicted RBP17.63■□□□□ 0.41
SDR39U1-206ENST00000553930 ZNF235Q14590 738 aa17.63■□□□□ 0.41
SDR39U1-206ENST00000553930 RBM44Q6ZP01 1051 aaKnown RBP17.63■□□□□ 0.41
SDR39U1-206ENST00000553930 RD3Q7Z3Z2 195 aa17.63■□□□□ 0.41
SDR39U1-206ENST00000553930 ARL10Q8N8L6 244 aa17.63■□□□□ 0.41
SDR39U1-206ENST00000553930 PLA2G15Q8NCC3 412 aa17.63■□□□□ 0.41
SDR39U1-206ENST00000553930 WDR48Q8TAF3 677 aa17.63■□□□□ 0.41
SDR39U1-206ENST00000553930 TEKT4Q8WW24 435 aa17.63■□□□□ 0.41
SDR39U1-206ENST00000553930 SPOCK2Q92563 424 aa17.63■□□□□ 0.41
SDR39U1-206ENST00000553930 IQCDQ96DY2 449 aa17.63■□□□□ 0.41
SDR39U1-206ENST00000553930 NSMCE3Q96MG7 304 aa17.63■□□□□ 0.41
SDR39U1-206ENST00000553930 WDR92Q96MX6 357 aa17.63■□□□□ 0.41
SDR39U1-206ENST00000553930 ETNK2Q9NVF9 386 aa17.63■□□□□ 0.41
SDR39U1-206ENST00000553930 IP6K2Q9UHH9 426 aa17.63■□□□□ 0.41
SDR39U1-206ENST00000553930 PADI4Q9UM07 663 aa17.63■□□□□ 0.41
SDR39U1-206ENST00000553930 A0A1W2PQ67 120 aa17.62■□□□□ 0.41
SDR39U1-206ENST00000553930 ZBED6P86452 979 aa17.62■□□□□ 0.41
SDR39U1-206ENST00000553930 TXNRD3NBQ6F5E7 133 aa17.62■□□□□ 0.41
SDR39U1-206ENST00000553930 CRTC1Q6UUV9 634 aa17.62■□□□□ 0.41
SDR39U1-206ENST00000553930 GKN2Q86XP6 184 aa17.62■□□□□ 0.41
SDR39U1-206ENST00000553930 PCDH19Q8TAB3 1148 aa17.62■□□□□ 0.41
SDR39U1-206ENST00000553930 CCDC3Q9BQI4 270 aa17.62■□□□□ 0.41
SDR39U1-206ENST00000553930 NUP85Q9BW27 656 aa17.62■□□□□ 0.41
SDR39U1-206ENST00000553930 PRORYQ9H606 182 aa17.62■□□□□ 0.41
SDR39U1-206ENST00000553930 ANAPC7Q9UJX3 599 aa17.62■□□□□ 0.41
SDR39U1-206ENST00000553930 CAPN11Q9UMQ6 739 aa17.62■□□□□ 0.41
SDR39U1-206ENST00000553930 DGKBQ9Y6T7 804 aa17.62■□□□□ 0.41
SDR39U1-206ENST00000553930 ATRXP46100 2492 aa17.62■□□□□ 0.41
SDR39U1-206ENST00000553930 TTC24A2A3L6 582 aaPredicted RBP17.61■□□□□ 0.41
SDR39U1-206ENST00000553930 CACNB4O00305 520 aaPredicted RBP17.61■□□□□ 0.41
SDR39U1-206ENST00000553930 HTRA2O43464 458 aaPredicted RBP17.61■□□□□ 0.41
SDR39U1-206ENST00000553930 MAFKO60675 156 aa17.61■□□□□ 0.41
SDR39U1-206ENST00000553930 SOCS5O75159 536 aa17.61■□□□□ 0.41
SDR39U1-206ENST00000553930 TNFP01375 233 aa17.61■□□□□ 0.41
SDR39U1-206ENST00000553930 CR2P20023 1033 aa17.61■□□□□ 0.41
SDR39U1-206ENST00000553930 SERPINB6P35237 376 aa17.61■□□□□ 0.41
SDR39U1-206ENST00000553930 PCBP4P57723 403 aaKnown RBP17.61■□□□□ 0.41
SDR39U1-206ENST00000553930 KIAA1024LP59773 190 aa17.61■□□□□ 0.41
SDR39U1-206ENST00000553930 ERVPABLB-1P60509 514 aa17.61■□□□□ 0.41
SDR39U1-206ENST00000553930 SLC25A11Q02978 314 aaKnown RBP17.61■□□□□ 0.41
SDR39U1-206ENST00000553930 CCDC173Q0VFZ6 552 aa17.61■□□□□ 0.41
SDR39U1-206ENST00000553930 TCEA2Q15560 299 aa17.61■□□□□ 0.41
SDR39U1-206ENST00000553930 NYAP1Q6ZVC0 841 aa17.61■□□□□ 0.41
SDR39U1-206ENST00000553930 BBS5Q8N3I7 341 aa17.61■□□□□ 0.41
SDR39U1-206ENST00000553930 PGBD5Q8N414 524 aa17.61■□□□□ 0.41
SDR39U1-206ENST00000553930 ATPAF2Q8N5M1 289 aa17.61■□□□□ 0.41
SDR39U1-206ENST00000553930 KYQ8NBH2 561 aa17.61■□□□□ 0.41
SDR39U1-206ENST00000553930 ZNF248Q8NDW4 579 aa17.61■□□□□ 0.41
SDR39U1-206ENST00000553930 OR56A4Q8NGH8 313 aa17.61■□□□□ 0.41
SDR39U1-206ENST00000553930 CPLX3Q8WVH0 158 aa17.61■□□□□ 0.41
SDR39U1-206ENST00000553930 FUBP1Q96AE4 644 aaKnown RBP17.61■□□□□ 0.41
SDR39U1-206ENST00000553930 ATXN7L3BQ96GX2 97 aa17.61■□□□□ 0.41
SDR39U1-206ENST00000553930 HIC2Q96JB3 615 aa17.61■□□□□ 0.41
SDR39U1-206ENST00000553930 BTBD6Q96KE9 485 aa17.61■□□□□ 0.41
SDR39U1-206ENST00000553930 NUDCD1Q96RS6 583 aa17.61■□□□□ 0.41
SDR39U1-206ENST00000553930 RBM15Q96T37 977 aaKnown RBP eCLIP17.61■□□□□ 0.416e-7■■■■□ 24.1
SDR39U1-206ENST00000553930 MGME1Q9BQP7 344 aa17.61■□□□□ 0.41
SDR39U1-206ENST00000553930 PCDH18Q9HCL0 1135 aa17.61■□□□□ 0.41
SDR39U1-206ENST00000553930 SIRPGQ9P1W8 387 aa17.61■□□□□ 0.41
SDR39U1-206ENST00000553930 GULP1Q9UBP9 304 aa17.61■□□□□ 0.41
SDR39U1-206ENST00000553930 SATB2Q9UPW6 733 aa17.61■□□□□ 0.41
SDR39U1-206ENST00000553930 PCDHGC4Q9Y5F7 938 aa17.61■□□□□ 0.41
SDR39U1-206ENST00000553930 ENTPD2Q9Y5L3 495 aa17.61■□□□□ 0.41
SDR39U1-206ENST00000553930 RAI2Q9Y5P3 530 aa17.61■□□□□ 0.41
SDR39U1-206ENST00000553930 A0A087X0T9 212 aa17.6■□□□□ 0.41
SDR39U1-206ENST00000553930 A8MX80 341 aa17.6■□□□□ 0.41
SDR39U1-206ENST00000553930 GOLGA6L19H0YKK7 550 aa17.6■□□□□ 0.41
SDR39U1-206ENST00000553930 CYP1A2P05177 515 aa17.6■□□□□ 0.41
SDR39U1-206ENST00000553930 HOXC4P09017 264 aaPredicted RBP17.6■□□□□ 0.41
SDR39U1-206ENST00000553930 FAM228BP0C875 321 aa17.6■□□□□ 0.41
SDR39U1-206ENST00000553930 GM2AP17900 193 aa17.6■□□□□ 0.41
SDR39U1-206ENST00000553930 KELP23276 732 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms