RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 CD38P28907 300 aa8.42□□□□□ -1.06
PSEN1-209ENST00000553855 MAT2AP31153 395 aaKnown RBP8.42□□□□□ -1.06
PSEN1-209ENST00000553855 GARSP41250 739 aaKnown RBP8.42□□□□□ -1.06
PSEN1-209ENST00000553855 TNNT3P45378 269 aaPredicted RBP8.42□□□□□ -1.06
PSEN1-209ENST00000553855 MMP13P45452 471 aa8.42□□□□□ -1.06
PSEN1-209ENST00000553855 GRIA4P48058 902 aa8.42□□□□□ -1.06
PSEN1-209ENST00000553855 ARSEP51690 589 aa8.42□□□□□ -1.06
PSEN1-209ENST00000553855 LIMK1P53667 647 aa8.42□□□□□ -1.06
PSEN1-209ENST00000553855 DYNLT1P63172 113 aa8.42□□□□□ -1.06
PSEN1-209ENST00000553855 OVGP1Q12889 678 aa8.42□□□□□ -1.06
PSEN1-209ENST00000553855 HNRNPDQ14103 355 aaKnown RBP8.42□□□□□ -1.06
PSEN1-209ENST00000553855 PDK1Q15118 436 aa8.42□□□□□ -1.06
PSEN1-209ENST00000553855 ARTNQ5T4W7 220 aa8.42□□□□□ -1.06
PSEN1-209ENST00000553855 PIP5KL1Q5T9C9 394 aa8.42□□□□□ -1.06
PSEN1-209ENST00000553855 KAZNQ674X7 775 aa8.42□□□□□ -1.06
PSEN1-209ENST00000553855 NCBP2-AS2Q69YL0 99 aa8.42□□□□□ -1.06
PSEN1-209ENST00000553855 NAPEPLDQ6IQ20 393 aa8.42□□□□□ -1.06
PSEN1-209ENST00000553855 MRPL14Q6P1L8 145 aaKnown RBP8.42□□□□□ -1.06
PSEN1-209ENST00000553855 PARS2Q7L3T8 475 aaKnown RBP8.42□□□□□ -1.06
PSEN1-209ENST00000553855 DGLUCYQ7Z3D6 616 aa8.42□□□□□ -1.06
PSEN1-209ENST00000553855 PEX26Q7Z412 305 aa8.42□□□□□ -1.06
PSEN1-209ENST00000553855 CCDC13Q8IYE1 715 aa8.42□□□□□ -1.06
PSEN1-209ENST00000553855 RCOR2Q8IZ40 523 aa8.42□□□□□ -1.06
PSEN1-209ENST00000553855 OXR1Q8N573 874 aa8.42□□□□□ -1.06
PSEN1-209ENST00000553855 NETO2Q8NC67 525 aa8.42□□□□□ -1.06
PSEN1-209ENST00000553855 PCDH19Q8TAB3 1148 aa8.42□□□□□ -1.06
PSEN1-209ENST00000553855 UBE2Q2Q8WVN8 375 aa8.42□□□□□ -1.06
PSEN1-209ENST00000553855 RAPGEF5Q92565 580 aa8.42□□□□□ -1.06
PSEN1-209ENST00000553855 FAF2Q96CS3 445 aa8.42□□□□□ -1.06
PSEN1-209ENST00000553855 PSKH2Q96QS6 385 aa8.42□□□□□ -1.06
PSEN1-209ENST00000553855 POLR1EQ9GZS1 481 aaKnown RBP8.42□□□□□ -1.06
PSEN1-209ENST00000553855 SUV39H2Q9H5I1 410 aa8.42□□□□□ -1.06
PSEN1-209ENST00000553855 GRPEL1Q9HAV7 217 aa8.42□□□□□ -1.06
PSEN1-209ENST00000553855 TM9SF3Q9HD45 589 aa8.42□□□□□ -1.06
PSEN1-209ENST00000553855 DKK3Q9UBP4 350 aa8.42□□□□□ -1.06
PSEN1-209ENST00000553855 LHX3Q9UBR4 397 aa8.42□□□□□ -1.06
PSEN1-209ENST00000553855 AMACRQ9UHK6 382 aa8.42□□□□□ -1.06
PSEN1-209ENST00000553855 HYOU1Q9Y4L1 999 aa8.42□□□□□ -1.06
PSEN1-209ENST00000553855 MUC22E2RYF6 1773 aaPredicted RBP8.42□□□□□ -1.06
PSEN1-209ENST00000553855 CKAP5Q14008 2032 aa8.42□□□□□ -1.06
PSEN1-209ENST00000553855 A0A1B0GVT2 93 aa8.41□□□□□ -1.06
PSEN1-209ENST00000553855 MACROD2A1Z1Q3 448 aa8.41□□□□□ -1.06
PSEN1-209ENST00000553855 GOLGA6L9A6NEM1 432 aa8.41□□□□□ -1.06
PSEN1-209ENST00000553855 MIF4GDA9UHW6 222 aaKnown RBP8.41□□□□□ -1.06
PSEN1-209ENST00000553855 FPGTO14772 594 aa8.41□□□□□ -1.06
PSEN1-209ENST00000553855 SLC31A1O15431 190 aa8.41□□□□□ -1.06
PSEN1-209ENST00000553855 YKT6O15498 198 aa8.41□□□□□ -1.06
PSEN1-209ENST00000553855 PJA2O43164 708 aa8.41□□□□□ -1.06
PSEN1-209ENST00000553855 MFSD11O43934 449 aa8.41□□□□□ -1.06
PSEN1-209ENST00000553855 MAFKO60675 156 aa8.41□□□□□ -1.06
PSEN1-209ENST00000553855 PIGNO95427 931 aa8.41□□□□□ -1.06
PSEN1-209ENST00000553855 IGHV4-34P06331 123 aa8.41□□□□□ -1.06
PSEN1-209ENST00000553855 CCDC175P0C221 793 aa8.41□□□□□ -1.06
PSEN1-209ENST00000553855 HNRNPA2B1P22626 353 aaKnown RBP8.41□□□□□ -1.06
PSEN1-209ENST00000553855 IL4RP24394 825 aa8.41□□□□□ -1.06
PSEN1-209ENST00000553855 GRNP28799 593 aaKnown RBP8.41□□□□□ -1.06
PSEN1-209ENST00000553855 GKP32189 559 aa8.41□□□□□ -1.06
PSEN1-209ENST00000553855 NR2C2P49116 596 aa8.41□□□□□ -1.06
PSEN1-209ENST00000553855 CSNK1EP49674 416 aaKnown RBP8.41□□□□□ -1.06
PSEN1-209ENST00000553855 METAP1P53582 386 aa8.41□□□□□ -1.06
PSEN1-209ENST00000553855 EPHB1P54762 984 aa8.41□□□□□ -1.06
PSEN1-209ENST00000553855 RWDD2BP57060 319 aa8.41□□□□□ -1.06
PSEN1-209ENST00000553855 GALNT2Q10471 571 aa8.41□□□□□ -1.06
PSEN1-209ENST00000553855 AP1B1Q10567 949 aa8.41□□□□□ -1.06
PSEN1-209ENST00000553855 GRIK2Q13002 908 aa8.41□□□□□ -1.06
PSEN1-209ENST00000553855 INAVAQ3KP66 663 aa8.41□□□□□ -1.06
PSEN1-209ENST00000553855 TFDP3Q5H9I0 405 aa8.41□□□□□ -1.06
PSEN1-209ENST00000553855 SPOCD1Q6ZMY3 1216 aa8.41□□□□□ -1.06
PSEN1-209ENST00000553855 ARHGAP36Q6ZRI8 547 aa8.41□□□□□ -1.06
PSEN1-209ENST00000553855 CPNE8Q86YQ8 564 aa8.41□□□□□ -1.06
PSEN1-209ENST00000553855 KATNAL2Q8IYT4 538 aa8.41□□□□□ -1.06
PSEN1-209ENST00000553855 MINDY1Q8N5J2 469 aa8.41□□□□□ -1.06
PSEN1-209ENST00000553855 RNF10Q8N5U6 811 aaKnown RBP8.41□□□□□ -1.06
PSEN1-209ENST00000553855 EXD1Q8NHP7 514 aa8.41□□□□□ -1.06
PSEN1-209ENST00000553855 PDCD6IPQ8WUM4 868 aaKnown RBP8.41□□□□□ -1.06
PSEN1-209ENST00000553855 P3H4Q92791 437 aa8.41□□□□□ -1.06
PSEN1-209ENST00000553855 FAM131CQ96AQ9 280 aa8.41□□□□□ -1.06
PSEN1-209ENST00000553855 KLHDC7BQ96G42 594 aa8.41□□□□□ -1.06
PSEN1-209ENST00000553855 SLC6A18Q96N87 628 aa8.41□□□□□ -1.06
PSEN1-209ENST00000553855 ALS2CR12Q96Q35 445 aa8.41□□□□□ -1.06
PSEN1-209ENST00000553855 NUDCD1Q96RS6 583 aa8.41□□□□□ -1.06
PSEN1-209ENST00000553855 DESI2Q9BSY9 194 aa8.41□□□□□ -1.06
PSEN1-209ENST00000553855 GAREM1Q9H706 876 aa8.41□□□□□ -1.06
PSEN1-209ENST00000553855 NT5MQ9NPB1 228 aa8.41□□□□□ -1.06
PSEN1-209ENST00000553855 GDF3Q9NR23 364 aa8.41□□□□□ -1.06
PSEN1-209ENST00000553855 RBM22Q9NW64 420 aaKnown RBP eCLIP8.41□□□□□ -1.06
PSEN1-209ENST00000553855 FAM8A1Q9UBU6 413 aa8.41□□□□□ -1.06
PSEN1-209ENST00000553855 ANKRD6Q9Y2G4 727 aa8.41□□□□□ -1.06
PSEN1-209ENST00000553855 FADS3Q9Y5Q0 445 aa8.41□□□□□ -1.06
PSEN1-209ENST00000553855 CFAP54Q96N23 3096 aa8.41□□□□□ -1.06
PSEN1-209ENST00000553855 THADAQ6YHU6 1953 aa8.41□□□□□ -1.06
PSEN1-209ENST00000553855 UPK3BL1B0FP48 263 aa8.4□□□□□ -1.06
PSEN1-209ENST00000553855 UPK3BL2E5RIL1 263 aa8.4□□□□□ -1.06
PSEN1-209ENST00000553855 VILLO15195 856 aa8.4□□□□□ -1.06
PSEN1-209ENST00000553855 INSIG1O15503 277 aa8.4□□□□□ -1.06
PSEN1-209ENST00000553855 MTSS1O43312 755 aa8.4□□□□□ -1.06
PSEN1-209ENST00000553855 LATO43561 262 aa8.4□□□□□ -1.06
PSEN1-209ENST00000553855 CST8O60676 142 aa8.4□□□□□ -1.06
PSEN1-209ENST00000553855 SOCS5O75159 536 aa8.4□□□□□ -1.06
PSEN1-209ENST00000553855 ZNF189O75820 626 aaPredicted RBP8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms