RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 BNIP1Q12981 228 aa7.36□□□□□ -1.23
ATXN3-221ENST00000553498 STX3Q13277 289 aa7.36□□□□□ -1.23
ATXN3-221ENST00000553498 POU6F1Q14863 301 aa7.36□□□□□ -1.23
ATXN3-221ENST00000553498 TBCCQ15814 346 aa7.36□□□□□ -1.23
ATXN3-221ENST00000553498 MPPE1Q53F39 396 aa7.36□□□□□ -1.23
ATXN3-221ENST00000553498 FAM91A1Q658Y4 838 aa7.36□□□□□ -1.23
ATXN3-221ENST00000553498 PDE12Q6L8Q7 609 aaKnown RBP7.36□□□□□ -1.23
ATXN3-221ENST00000553498 CGB2Q6NT52 195 aa7.36□□□□□ -1.23
ATXN3-221ENST00000553498 MRNIPQ6NTE8 343 aa7.36□□□□□ -1.23
ATXN3-221ENST00000553498 RETSATQ6NUM9 610 aa7.36□□□□□ -1.23
ATXN3-221ENST00000553498 NEPROQ6NW34 567 aa7.36□□□□□ -1.23
ATXN3-221ENST00000553498 LRRC69Q6ZNQ3 347 aa7.36□□□□□ -1.23
ATXN3-221ENST00000553498 FAM47EQ6ZV65 393 aa7.36□□□□□ -1.23
ATXN3-221ENST00000553498 HTR3DQ70Z44 454 aa7.36□□□□□ -1.23
ATXN3-221ENST00000553498 ZC3HC1Q86WB0 502 aaKnown RBP7.36□□□□□ -1.23
ATXN3-221ENST00000553498 WDR75Q8IWA0 830 aaKnown RBP7.36□□□□□ -1.23
ATXN3-221ENST00000553498 ALDH16A1Q8IZ83 802 aa7.36□□□□□ -1.23
ATXN3-221ENST00000553498 GPR150Q8NGU9 434 aa7.36□□□□□ -1.23
ATXN3-221ENST00000553498 PPP1R14CQ8TAE6 165 aa7.36□□□□□ -1.23
ATXN3-221ENST00000553498 STYXQ8WUJ0 223 aa7.36□□□□□ -1.23
ATXN3-221ENST00000553498 CCDC126Q96EE4 140 aa7.36□□□□□ -1.23
ATXN3-221ENST00000553498 TMA16Q96EY4 203 aaKnown RBP7.36□□□□□ -1.23
ATXN3-221ENST00000553498 ZNF419Q96HQ0 510 aaPredicted RBP7.36□□□□□ -1.23
ATXN3-221ENST00000553498 VPS39Q96JC1 886 aa7.36□□□□□ -1.23
ATXN3-221ENST00000553498 PRICKLE1Q96MT3 831 aaPredicted RBP7.36□□□□□ -1.23
ATXN3-221ENST00000553498 NUDCD1Q96RS6 583 aa7.36□□□□□ -1.23
ATXN3-221ENST00000553498 TCF12Q99081 682 aa7.36□□□□□ -1.23
ATXN3-221ENST00000553498 SEMA3CQ99985 751 aa7.36□□□□□ -1.23
ATXN3-221ENST00000553498 APOL2Q9BQE5 337 aa7.36□□□□□ -1.23
ATXN3-221ENST00000553498 TRIM56Q9BRZ2 755 aaKnown RBP7.36□□□□□ -1.23
ATXN3-221ENST00000553498 ADGRE3Q9BY15 652 aa7.36□□□□□ -1.23
ATXN3-221ENST00000553498 UGT1A7Q9HAW7 530 aa7.36□□□□□ -1.23
ATXN3-221ENST00000553498 UGT1A10Q9HAW8 530 aa7.36□□□□□ -1.23
ATXN3-221ENST00000553498 UGT1A8Q9HAW9 530 aa7.36□□□□□ -1.23
ATXN3-221ENST00000553498 POPDC3Q9HBV1 291 aa7.36□□□□□ -1.23
ATXN3-221ENST00000553498 IARS2Q9NSE4 1012 aaKnown RBP7.36□□□□□ -1.23
ATXN3-221ENST00000553498 UBP1Q9NZI7 540 aa7.36□□□□□ -1.23
ATXN3-221ENST00000553498 HACD3Q9P035 362 aa7.36□□□□□ -1.23
ATXN3-221ENST00000553498 RPL26L1Q9UNX3 145 aaKnown RBP7.36□□□□□ -1.23
ATXN3-221ENST00000553498 PSAT1Q9Y617 370 aa7.36□□□□□ -1.23
ATXN3-221ENST00000553498 TRIP12Q14669 1992 aaPredicted RBP7.36□□□□□ -1.23
ATXN3-221ENST00000553498 TANC1Q9C0D5 1861 aa7.36□□□□□ -1.23
ATXN3-221ENST00000553498 SLCO1B7G3V0H7 640 aa7.35□□□□□ -1.23
ATXN3-221ENST00000553498 H0YHG0 523 aa7.35□□□□□ -1.23
ATXN3-221ENST00000553498 TRAFD1O14545 582 aaPredicted RBP7.35□□□□□ -1.23
ATXN3-221ENST00000553498 KHNYNO15037 678 aaKnown RBP7.35□□□□□ -1.23
ATXN3-221ENST00000553498 OIP5O43482 229 aa7.35□□□□□ -1.23
ATXN3-221ENST00000553498 TGM5O43548 720 aa7.35□□□□□ -1.23
ATXN3-221ENST00000553498 CCDC22O60826 627 aa7.35□□□□□ -1.23
ATXN3-221ENST00000553498 LUC7L3O95232 432 aaKnown RBP7.35□□□□□ -1.23
ATXN3-221ENST00000553498 VAPBO95292 243 aa7.35□□□□□ -1.23
ATXN3-221ENST00000553498 CXCL14O95715 111 aa7.35□□□□□ -1.23
ATXN3-221ENST00000553498 GLUD1P00367 558 aa7.35□□□□□ -1.23
ATXN3-221ENST00000553498 CYBBP04839 570 aa7.35□□□□□ -1.23
ATXN3-221ENST00000553498 RB1P06400 928 aa7.35□□□□□ -1.23
ATXN3-221ENST00000553498 CNPP09543 421 aaKnown RBP7.35□□□□□ -1.23
ATXN3-221ENST00000553498 HNRNPA1P09651 372 aaKnown RBP eCLIP7.35□□□□□ -1.23
ATXN3-221ENST00000553498 ATXN1LP0C7T5 689 aaKnown RBP7.35□□□□□ -1.23
ATXN3-221ENST00000553498 HSPA8P11142 646 aaKnown RBP7.35□□□□□ -1.23
ATXN3-221ENST00000553498 CPA3P15088 417 aa7.35□□□□□ -1.23
ATXN3-221ENST00000553498 STMN1P16949 149 aa7.35□□□□□ -1.23
ATXN3-221ENST00000553498 CR2P20023 1033 aa7.35□□□□□ -1.23
ATXN3-221ENST00000553498 OGNP20774 298 aaKnown RBP7.35□□□□□ -1.23
ATXN3-221ENST00000553498 BGNP21810 368 aa7.35□□□□□ -1.23
ATXN3-221ENST00000553498 ITGB8P26012 769 aa7.35□□□□□ -1.23
ATXN3-221ENST00000553498 ACVRL1P37023 503 aa7.35□□□□□ -1.23
ATXN3-221ENST00000553498 ARFIP2P53365 341 aa7.35□□□□□ -1.23
ATXN3-221ENST00000553498 EPHA5P54756 1037 aa7.35□□□□□ -1.23
ATXN3-221ENST00000553498 SLC12A2P55011 1212 aa7.35□□□□□ -1.23
ATXN3-221ENST00000553498 AP1S1P61966 158 aa7.35□□□□□ -1.23
ATXN3-221ENST00000553498 OCRLQ01968 901 aa7.35□□□□□ -1.23
ATXN3-221ENST00000553498 DSC2Q02487 901 aa7.35□□□□□ -1.23
ATXN3-221ENST00000553498 MSLNQ13421 630 aaPredicted RBP7.35□□□□□ -1.23
ATXN3-221ENST00000553498 USP10Q14694 798 aaKnown RBP7.35□□□□□ -1.23
ATXN3-221ENST00000553498 CHI3L2Q15782 390 aa7.35□□□□□ -1.23
ATXN3-221ENST00000553498 CNGA3Q16281 694 aa7.35□□□□□ -1.23
ATXN3-221ENST00000553498 FASTKD1Q53R41 847 aaKnown RBP7.35□□□□□ -1.23
ATXN3-221ENST00000553498 SIRPB2Q5JXA9 342 aa7.35□□□□□ -1.23
ATXN3-221ENST00000553498 N4BP2L1Q5TBK1 243 aaPredicted RBP7.35□□□□□ -1.23
ATXN3-221ENST00000553498 CXorf57Q6NSI4 855 aaKnown RBP7.35□□□□□ -1.23
ATXN3-221ENST00000553498 ESRP1Q6NXG1 681 aaKnown RBP7.35□□□□□ -1.23
ATXN3-221ENST00000553498 CDHR3Q6ZTQ4 885 aa7.35□□□□□ -1.23
ATXN3-221ENST00000553498 TMC7Q7Z402 723 aa7.35□□□□□ -1.23
ATXN3-221ENST00000553498 SDCCAG8Q86SQ7 713 aaPredicted RBP7.35□□□□□ -1.23
ATXN3-221ENST00000553498 TMEM150AQ86TG1 271 aa7.35□□□□□ -1.23
ATXN3-221ENST00000553498 UNC5BQ8IZJ1 945 aa7.35□□□□□ -1.23
ATXN3-221ENST00000553498 DCAF4L2Q8NA75 395 aa7.35□□□□□ -1.23
ATXN3-221ENST00000553498 PPP4R1Q8TF05 950 aa7.35□□□□□ -1.23
ATXN3-221ENST00000553498 C10orf82Q8WW14 230 aa7.35□□□□□ -1.23
ATXN3-221ENST00000553498 HERVK_113Q902F9 699 aa7.35□□□□□ -1.23
ATXN3-221ENST00000553498 INPP5DQ92835 1189 aa7.35□□□□□ -1.23
ATXN3-221ENST00000553498 SAMD11Q96NU1 681 aa7.35□□□□□ -1.23
ATXN3-221ENST00000553498 KLHL5Q96PQ7 755 aa7.35□□□□□ -1.23
ATXN3-221ENST00000553498 TRIB3Q96RU7 358 aa7.35□□□□□ -1.23
ATXN3-221ENST00000553498 AGAP2Q99490 1192 aa7.35□□□□□ -1.23
ATXN3-221ENST00000553498 RNF38Q9H0F5 515 aa7.35□□□□□ -1.23
ATXN3-221ENST00000553498 WWP1Q9H0M0 922 aa7.35□□□□□ -1.23
ATXN3-221ENST00000553498 MUC3BQ9H195 1237 aa7.35□□□□□ -1.23
ATXN3-221ENST00000553498 NMRAL1Q9HBL8 299 aa7.35□□□□□ -1.23
ATXN3-221ENST00000553498 SLCO1B3Q9NPD5 702 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms