RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 POM121L1PQ3SYA9 428 aa10.32□□□□□ -0.76
TRAFD1-208ENST00000552890 ZNF569Q5MCW4 686 aa10.32□□□□□ -0.76
TRAFD1-208ENST00000552890 ARMC3Q5W041 872 aa10.32□□□□□ -0.76
TRAFD1-208ENST00000552890 KYAT3Q6YP21 454 aaKnown RBP10.32□□□□□ -0.76
TRAFD1-208ENST00000552890 ZNF765Q7L2R6 523 aa10.32□□□□□ -0.76
TRAFD1-208ENST00000552890 CPNE8Q86YQ8 564 aa10.32□□□□□ -0.76
TRAFD1-208ENST00000552890 ZCCHC9Q8N567 271 aaKnown RBP10.32□□□□□ -0.76
TRAFD1-208ENST00000552890 CCDC89Q8N998 374 aa10.32□□□□□ -0.76
TRAFD1-208ENST00000552890 GRK7Q8WTQ7 553 aa10.32□□□□□ -0.76
TRAFD1-208ENST00000552890 BTN2A2Q8WVV5 523 aa10.32□□□□□ -0.76
TRAFD1-208ENST00000552890 RMDN1Q96DB5 314 aa10.32□□□□□ -0.76
TRAFD1-208ENST00000552890 SPATA13Q96N96 652 aa10.32□□□□□ -0.76
TRAFD1-208ENST00000552890 LYSMD1Q96S90 227 aa10.32□□□□□ -0.76
TRAFD1-208ENST00000552890 RTKNQ9BST9 563 aa10.32□□□□□ -0.76
TRAFD1-208ENST00000552890 TDRD1Q9BXT4 1180 aaKnown RBP10.32□□□□□ -0.76
TRAFD1-208ENST00000552890 SLC32A1Q9H598 525 aa10.32□□□□□ -0.76
TRAFD1-208ENST00000552890 MAGEE1Q9HCI5 957 aa10.32□□□□□ -0.76
TRAFD1-208ENST00000552890 RSPH14Q9UHP6 348 aa10.32□□□□□ -0.76
TRAFD1-208ENST00000552890 RAPGEFL1Q9UHV5 662 aa10.32□□□□□ -0.76
TRAFD1-208ENST00000552890 ZNF148Q9UQR1 794 aa10.32□□□□□ -0.76
TRAFD1-208ENST00000552890 PCDHGC4Q9Y5F7 938 aa10.32□□□□□ -0.76
TRAFD1-208ENST00000552890 TRPM6Q9BX84 2022 aa10.31□□□□□ -0.76
TRAFD1-208ENST00000552890 A0A0J9YYE9 177 aa10.31□□□□□ -0.76
TRAFD1-208ENST00000552890 NEMP2A6NFY4 417 aa10.31□□□□□ -0.76
TRAFD1-208ENST00000552890 C10orf142B7Z368 130 aa10.31□□□□□ -0.76
TRAFD1-208ENST00000552890 KIF2AO00139 706 aaPredicted RBP10.31□□□□□ -0.76
TRAFD1-208ENST00000552890 PGRMC1O00264 195 aaKnown RBP10.31□□□□□ -0.76
TRAFD1-208ENST00000552890 SLC31A1O15431 190 aa10.31□□□□□ -0.76
TRAFD1-208ENST00000552890 KCNN4O15554 427 aa10.31□□□□□ -0.76
TRAFD1-208ENST00000552890 CEP104O60308 925 aa10.31□□□□□ -0.76
TRAFD1-208ENST00000552890 PIGNO95427 931 aa10.31□□□□□ -0.76
TRAFD1-208ENST00000552890 TRBC1P01850 177 aa10.31□□□□□ -0.76
TRAFD1-208ENST00000552890 FGF1P05230 155 aa10.31□□□□□ -0.76
TRAFD1-208ENST00000552890 CDK4P11802 303 aa10.31□□□□□ -0.76
TRAFD1-208ENST00000552890 CD86P42081 329 aa10.31□□□□□ -0.76
TRAFD1-208ENST00000552890 PAFAH1B1P43034 410 aa10.31□□□□□ -0.76
TRAFD1-208ENST00000552890 LIG3P49916 1009 aa10.31□□□□□ -0.76
TRAFD1-208ENST00000552890 THOP1P52888 689 aa10.31□□□□□ -0.76
TRAFD1-208ENST00000552890 SARNPP82979 210 aaKnown RBP10.31□□□□□ -0.76
TRAFD1-208ENST00000552890 CDK16Q00536 496 aa10.31□□□□□ -0.76
TRAFD1-208ENST00000552890 MTM1Q13496 603 aa10.31□□□□□ -0.76
TRAFD1-208ENST00000552890 LONRF2Q1L5Z9 754 aa10.31□□□□□ -0.76
TRAFD1-208ENST00000552890 PDPK2PQ6A1A2 396 aa10.31□□□□□ -0.76
TRAFD1-208ENST00000552890 NPNTQ6UXI9 565 aa10.31□□□□□ -0.76
TRAFD1-208ENST00000552890 TP53INP2Q8IXH6 220 aa10.31□□□□□ -0.76
TRAFD1-208ENST00000552890 C1orf216Q8TAB5 229 aa10.31□□□□□ -0.76
TRAFD1-208ENST00000552890 ARRDC2Q8TBH0 407 aa10.31□□□□□ -0.76
TRAFD1-208ENST00000552890 TBATAQ96M53 351 aa10.31□□□□□ -0.76
TRAFD1-208ENST00000552890 EDEM2Q9BV94 578 aa10.31□□□□□ -0.76
TRAFD1-208ENST00000552890 TLR10Q9BXR5 811 aa10.31□□□□□ -0.76
TRAFD1-208ENST00000552890 GBA3Q9H227 469 aa10.31□□□□□ -0.76
TRAFD1-208ENST00000552890 LRRC40Q9H9A6 602 aa10.31□□□□□ -0.76
TRAFD1-208ENST00000552890 DNAAF2Q9NVR5 837 aaKnown RBP10.31□□□□□ -0.76
TRAFD1-208ENST00000552890 PKD2L2Q9NZM6 624 aa10.31□□□□□ -0.76
TRAFD1-208ENST00000552890 NCKIPSDQ9NZQ3 722 aa10.31□□□□□ -0.76
TRAFD1-208ENST00000552890 PAK5Q9P286 719 aa10.31□□□□□ -0.76
TRAFD1-208ENST00000552890 PACSIN2Q9UNF0 486 aaPredicted RBP10.31□□□□□ -0.76
TRAFD1-208ENST00000552890 ANKRD6Q9Y2G4 727 aa10.31□□□□□ -0.76
TRAFD1-208ENST00000552890 ACTL7AQ9Y615 435 aa10.31□□□□□ -0.76
TRAFD1-208ENST00000552890 NYNRINQ9P2P1 1898 aaKnown RBP10.31□□□□□ -0.76
TRAFD1-208ENST00000552890 CEP192Q8TEP8 1941 aa10.31□□□□□ -0.76
TRAFD1-208ENST00000552890 SHROOM3Q8TF72 1996 aa10.3□□□□□ -0.76
TRAFD1-208ENST00000552890 IGLON5A6NGN9 336 aa10.3□□□□□ -0.76
TRAFD1-208ENST00000552890 CAPN8A6NHC0 703 aa10.3□□□□□ -0.76
TRAFD1-208ENST00000552890 CACNB4O00305 520 aaPredicted RBP10.3□□□□□ -0.76
TRAFD1-208ENST00000552890 WNT9AO14904 365 aa10.3□□□□□ -0.76
TRAFD1-208ENST00000552890 MUSKO15146 869 aa10.3□□□□□ -0.76
TRAFD1-208ENST00000552890 FZD6O60353 706 aa10.3□□□□□ -0.76
TRAFD1-208ENST00000552890 MAP3K6O95382 1288 aa10.3□□□□□ -0.76
TRAFD1-208ENST00000552890 PAK4O96013 591 aaPredicted RBP10.3□□□□□ -0.76
TRAFD1-208ENST00000552890 FGGP02679 453 aa10.3□□□□□ -0.76
TRAFD1-208ENST00000552890 PECAM1P16284 738 aaPredicted RBP10.3□□□□□ -0.76
TRAFD1-208ENST00000552890 TSHRP16473 764 aa10.3□□□□□ -0.76
TRAFD1-208ENST00000552890 ENGP17813 658 aa10.3□□□□□ -0.76
TRAFD1-208ENST00000552890 RBL1P28749 1068 aa10.3□□□□□ -0.76
TRAFD1-208ENST00000552890 MAT2AP31153 395 aaKnown RBP10.3□□□□□ -0.76
TRAFD1-208ENST00000552890 GKP32189 559 aa10.3□□□□□ -0.76
TRAFD1-208ENST00000552890 RGRP47804 291 aa10.3□□□□□ -0.76
TRAFD1-208ENST00000552890 CCT8P50990 548 aa10.3□□□□□ -0.76
TRAFD1-208ENST00000552890 MAXP61244 160 aa10.3□□□□□ -0.76
TRAFD1-208ENST00000552890 GNG11P61952 73 aa10.3□□□□□ -0.76
TRAFD1-208ENST00000552890 HNRNPKP61978 463 aaKnown RBP eCLIP10.3□□□□□ -0.76
TRAFD1-208ENST00000552890 IRX4P78413 519 aa10.3□□□□□ -0.76
TRAFD1-208ENST00000552890 DPTQ07507 201 aa10.3□□□□□ -0.76
TRAFD1-208ENST00000552890 WASHC5Q12768 1159 aa10.3□□□□□ -0.76
TRAFD1-208ENST00000552890 ZNF211Q13398 564 aaPredicted RBP10.3□□□□□ -0.76
TRAFD1-208ENST00000552890 PUM1Q14671 1186 aaKnown RBP eCLIP10.3□□□□□ -0.76
TRAFD1-208ENST00000552890 ANKRD20A2Q5SQ80 823 aa10.3□□□□□ -0.76
TRAFD1-208ENST00000552890 ANKRD20A1Q5TYW2 823 aa10.3□□□□□ -0.76
TRAFD1-208ENST00000552890 ANKRD20A3Q5VUR7 823 aa10.3□□□□□ -0.76
TRAFD1-208ENST00000552890 LIPIQ6XZB0 460 aa10.3□□□□□ -0.76
TRAFD1-208ENST00000552890 GSTA5Q7RTV2 222 aa10.3□□□□□ -0.76
TRAFD1-208ENST00000552890 ABI3BPQ7Z7G0 1075 aa10.3□□□□□ -0.76
TRAFD1-208ENST00000552890 REXO1L1PQ8IX06 675 aa10.3□□□□□ -0.76
TRAFD1-208ENST00000552890 ZNF567Q8N184 647 aa10.3□□□□□ -0.76
TRAFD1-208ENST00000552890 PGBD5Q8N414 524 aa10.3□□□□□ -0.76
TRAFD1-208ENST00000552890 DEFB119Q8N690 84 aa10.3□□□□□ -0.76
TRAFD1-208ENST00000552890 FRMD1Q8N878 549 aa10.3□□□□□ -0.76
TRAFD1-208ENST00000552890 TMEM145Q8NBT3 493 aa10.3□□□□□ -0.76
TRAFD1-208ENST00000552890 SLC35B2Q8TB61 432 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms