RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 SNRPD1P62314 119 aaKnown RBP11.5□□□□□ -0.57
TMEM116-218ENST00000552839 ARF5P84085 180 aa11.5□□□□□ -0.57
TMEM116-218ENST00000552839 PPIDQ08752 370 aaKnown RBP11.5□□□□□ -0.57
TMEM116-218ENST00000552839 XRCC4Q13426 336 aa11.5□□□□□ -0.57
TMEM116-218ENST00000552839 SNX1Q13596 522 aa11.5□□□□□ -0.57
TMEM116-218ENST00000552839 RFTN1Q14699 578 aaPredicted RBP11.5□□□□□ -0.57
TMEM116-218ENST00000552839 LBRQ14739 615 aaKnown RBP11.5□□□□□ -0.57
TMEM116-218ENST00000552839 DLG2Q15700 870 aa11.5□□□□□ -0.57
TMEM116-218ENST00000552839 TBC1D25Q3MII6 688 aa11.5□□□□□ -0.57
TMEM116-218ENST00000552839 SLC45A4Q5BKX6 768 aa11.5□□□□□ -0.57
TMEM116-218ENST00000552839 MARC1Q5VT66 337 aa11.5□□□□□ -0.57
TMEM116-218ENST00000552839 PAPD7Q5XG87 772 aaKnown RBP11.5□□□□□ -0.57
TMEM116-218ENST00000552839 AFMIDQ63HM1 303 aa11.5□□□□□ -0.57
TMEM116-218ENST00000552839 ARHGAP36Q6ZRI8 547 aa11.5□□□□□ -0.57
TMEM116-218ENST00000552839 DSG4Q86SJ6 1040 aa11.5□□□□□ -0.57
TMEM116-218ENST00000552839 SH2D3CQ8N5H7 860 aa11.5□□□□□ -0.57
TMEM116-218ENST00000552839 PCDH20Q8N6Y1 951 aaKnown RBP11.5□□□□□ -0.57
TMEM116-218ENST00000552839 CCDC89Q8N998 374 aa11.5□□□□□ -0.57
TMEM116-218ENST00000552839 GANCQ8TET4 914 aa11.5□□□□□ -0.57
TMEM116-218ENST00000552839 COG1Q8WTW3 980 aa11.5□□□□□ -0.57
TMEM116-218ENST00000552839 C1orf54Q8WWF1 131 aa11.5□□□□□ -0.57
TMEM116-218ENST00000552839 OR8D1Q8WZ84 308 aa11.5□□□□□ -0.57
TMEM116-218ENST00000552839 LRRC45Q96CN5 670 aa11.5□□□□□ -0.57
TMEM116-218ENST00000552839 LGMNQ99538 433 aa11.5□□□□□ -0.57
TMEM116-218ENST00000552839 TM6SF2Q9BZW4 377 aa11.5□□□□□ -0.57
TMEM116-218ENST00000552839 CEP44Q9C0F1 390 aa11.5□□□□□ -0.57
TMEM116-218ENST00000552839 NOL6Q9H6R4 1146 aaKnown RBP11.5□□□□□ -0.57
TMEM116-218ENST00000552839 GDF3Q9NR23 364 aa11.5□□□□□ -0.57
TMEM116-218ENST00000552839 RNF14Q9UBS8 474 aa11.5□□□□□ -0.57
TMEM116-218ENST00000552839 SCML1Q9UN30 329 aa11.5□□□□□ -0.57
TMEM116-218ENST00000552839 TTC34A8MYJ7 566 aa11.49□□□□□ -0.57
TMEM116-218ENST00000552839 ERVH48-1M5A8F1 160 aa11.49□□□□□ -0.57
TMEM116-218ENST00000552839 KCNK1O00180 336 aa11.49□□□□□ -0.57
TMEM116-218ENST00000552839 ZNF185O15231 689 aa11.49□□□□□ -0.57
TMEM116-218ENST00000552839 MATN3O15232 486 aa11.49□□□□□ -0.57
TMEM116-218ENST00000552839 YKT6O15498 198 aa11.49□□□□□ -0.57
TMEM116-218ENST00000552839 KCNN4O15554 427 aa11.49□□□□□ -0.57
TMEM116-218ENST00000552839 SIN3BO75182 1162 aa11.49□□□□□ -0.57
TMEM116-218ENST00000552839 IFNB1P01574 187 aa11.49□□□□□ -0.57
TMEM116-218ENST00000552839 SRCP12931 536 aa11.49□□□□□ -0.57
TMEM116-218ENST00000552839 PRLRP16471 622 aa11.49□□□□□ -0.57
TMEM116-218ENST00000552839 CKMT2P17540 419 aa11.49□□□□□ -0.57
TMEM116-218ENST00000552839 CA4P22748 312 aa11.49□□□□□ -0.57
TMEM116-218ENST00000552839 ADCY2Q08462 1091 aa11.49□□□□□ -0.57
TMEM116-218ENST00000552839 CST6Q15828 149 aa11.49□□□□□ -0.57
TMEM116-218ENST00000552839 INO80DQ53TQ3 878 aaPredicted RBP11.49□□□□□ -0.57
TMEM116-218ENST00000552839 ITPRIPL1Q6GPH6 555 aa11.49□□□□□ -0.57
TMEM116-218ENST00000552839 Q6ZVU0 165 aa11.49□□□□□ -0.57
TMEM116-218ENST00000552839 KANSL1Q7Z3B3 1105 aa11.49□□□□□ -0.57
TMEM116-218ENST00000552839 TP53INP2Q8IXH6 220 aa11.49□□□□□ -0.57
TMEM116-218ENST00000552839 CACTIN-AS1Q8N1I8 211 aa11.49□□□□□ -0.57
TMEM116-218ENST00000552839 RASGEF1CQ8N431 466 aa11.49□□□□□ -0.57
TMEM116-218ENST00000552839 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.49□□□□□ -0.57
TMEM116-218ENST00000552839 KDM1BQ8NB78 822 aa11.49□□□□□ -0.57
TMEM116-218ENST00000552839 ACTRT1Q8TDG2 376 aa11.49□□□□□ -0.57
TMEM116-218ENST00000552839 GRK7Q8WTQ7 553 aa11.49□□□□□ -0.57
TMEM116-218ENST00000552839 HTR3CQ8WXA8 447 aa11.49□□□□□ -0.57
TMEM116-218ENST00000552839 ATG4AQ8WYN0 398 aa11.49□□□□□ -0.57
TMEM116-218ENST00000552839 ALG14Q96F25 216 aa11.49□□□□□ -0.57
TMEM116-218ENST00000552839 MS4A14Q96JA4 679 aa11.49□□□□□ -0.57
TMEM116-218ENST00000552839 LMLNQ96KR4 655 aa11.49□□□□□ -0.57
TMEM116-218ENST00000552839 OLFM3Q96PB7 478 aa11.49□□□□□ -0.57
TMEM116-218ENST00000552839 AP1M1Q9BXS5 423 aa11.49□□□□□ -0.57
TMEM116-218ENST00000552839 KLC2Q9H0B6 622 aa11.49□□□□□ -0.57
TMEM116-218ENST00000552839 TNKS2Q9H2K2 1166 aa11.49□□□□□ -0.57
TMEM116-218ENST00000552839 ZDHHC6Q9H6R6 413 aa11.49□□□□□ -0.57
TMEM116-218ENST00000552839 NT5MQ9NPB1 228 aa11.49□□□□□ -0.57
TMEM116-218ENST00000552839 DYRK4Q9NR20 520 aa11.49□□□□□ -0.57
TMEM116-218ENST00000552839 RBM22Q9NW64 420 aaKnown RBP eCLIP11.49□□□□□ -0.57
TMEM116-218ENST00000552839 CLCA2Q9UQC9 943 aa11.49□□□□□ -0.57
TMEM116-218ENST00000552839 HS3ST2Q9Y278 367 aa11.49□□□□□ -0.57
TMEM116-218ENST00000552839 OR51B4Q9Y5P0 310 aa11.49□□□□□ -0.57
TMEM116-218ENST00000552839 CXorf51AA0A1B0GTR3 108 aa11.48□□□□□ -0.57
TMEM116-218ENST00000552839 TCRBV7S2A1N4TA0A589 114 aa11.48□□□□□ -0.57
TMEM116-218ENST00000552839 GOLGA6CA6NDK9 693 aa11.48□□□□□ -0.57
TMEM116-218ENST00000552839 GOLGA6BA6NDN3 693 aa11.48□□□□□ -0.57
TMEM116-218ENST00000552839 CAPN8A6NHC0 703 aa11.48□□□□□ -0.57
TMEM116-218ENST00000552839 LRRC72A6NJI9 287 aa11.48□□□□□ -0.57
TMEM116-218ENST00000552839 C1QTNF3-AMACRE9PGA6 284 aa11.48□□□□□ -0.57
TMEM116-218ENST00000552839 RNF103O00237 685 aa11.48□□□□□ -0.57
TMEM116-218ENST00000552839 MAFKO60675 156 aa11.48□□□□□ -0.57
TMEM116-218ENST00000552839 RNASEH2AO75792 299 aaKnown RBP11.48□□□□□ -0.57
TMEM116-218ENST00000552839 GAS8O95995 478 aa11.48□□□□□ -0.57
TMEM116-218ENST00000552839 GSRP00390 522 aa11.48□□□□□ -0.57
TMEM116-218ENST00000552839 JCHAINP01591 159 aa11.48□□□□□ -0.57
TMEM116-218ENST00000552839 GOLGA6DP0CG33 693 aa11.48□□□□□ -0.57
TMEM116-218ENST00000552839 CCNB1P14635 433 aa11.48□□□□□ -0.57
TMEM116-218ENST00000552839 XPAP23025 273 aaPredicted RBP11.48□□□□□ -0.57
TMEM116-218ENST00000552839 RXRGP48443 463 aa11.48□□□□□ -0.57
TMEM116-218ENST00000552839 ARRB1P49407 418 aaPredicted RBP11.48□□□□□ -0.57
TMEM116-218ENST00000552839 CCR5P51681 352 aa11.48□□□□□ -0.57
TMEM116-218ENST00000552839 NXPH1P58417 271 aa11.48□□□□□ -0.57
TMEM116-218ENST00000552839 INSM1Q01101 510 aaPredicted RBP11.48□□□□□ -0.57
TMEM116-218ENST00000552839 SFSWAPQ12872 951 aaKnown RBP11.48□□□□□ -0.57
TMEM116-218ENST00000552839 SLC10A2Q12908 348 aaPredicted RBP11.48□□□□□ -0.57
TMEM116-218ENST00000552839 KLF1Q13351 362 aaPredicted RBP11.48□□□□□ -0.57
TMEM116-218ENST00000552839 ILKQ13418 452 aa11.48□□□□□ -0.57
TMEM116-218ENST00000552839 TUBB2AQ13885 445 aa11.48□□□□□ -0.57
TMEM116-218ENST00000552839 PRPSAP1Q14558 356 aa11.48□□□□□ -0.57
TMEM116-218ENST00000552839 HNRNPA1L2Q32P51 320 aaKnown RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms