RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 NINJ1Q92982 152 aa5.94□□□□□ -1.46
SCAF11-213ENST00000550629 FAM149B1Q96BN6 582 aa5.94□□□□□ -1.46
SCAF11-213ENST00000550629 SERPINB11Q96P15 392 aa5.94□□□□□ -1.46
SCAF11-213ENST00000550629 MCEEQ96PE7 176 aa5.94□□□□□ -1.46
SCAF11-213ENST00000550629 NPY6RQ99463 290 aa5.94□□□□□ -1.46
SCAF11-213ENST00000550629 ELF4Q99607 663 aaPredicted RBP5.94□□□□□ -1.46
SCAF11-213ENST00000550629 NUP85Q9BW27 656 aa5.94□□□□□ -1.46
SCAF11-213ENST00000550629 PACSIN1Q9BY11 444 aa5.94□□□□□ -1.46
SCAF11-213ENST00000550629 NACA2Q9H009 215 aa5.94□□□□□ -1.46
SCAF11-213ENST00000550629 VPS11Q9H270 941 aa5.94□□□□□ -1.46
SCAF11-213ENST00000550629 KIF9Q9HAQ2 790 aa5.94□□□□□ -1.46
SCAF11-213ENST00000550629 OXSMQ9NWU1 459 aa5.94□□□□□ -1.46
SCAF11-213ENST00000550629 OSER1Q9NX31 292 aa5.94□□□□□ -1.46
SCAF11-213ENST00000550629 OBP2AQ9NY56 170 aa5.94□□□□□ -1.46
SCAF11-213ENST00000550629 CTTNBP2NLQ9P2B4 639 aa5.94□□□□□ -1.46
SCAF11-213ENST00000550629 EPS15L1Q9UBC2 864 aa5.94□□□□□ -1.46
SCAF11-213ENST00000550629 CHORDC1Q9UHD1 332 aaPredicted RBP5.94□□□□□ -1.46
SCAF11-213ENST00000550629 IP6K2Q9UHH9 426 aa5.94□□□□□ -1.46
SCAF11-213ENST00000550629 MAGEL2Q9UJ55 1249 aa5.94□□□□□ -1.46
SCAF11-213ENST00000550629 CDH7Q9ULB5 785 aa5.94□□□□□ -1.46
SCAF11-213ENST00000550629 ARHGAP26Q9UNA1 814 aa5.94□□□□□ -1.46
SCAF11-213ENST00000550629 PPP2R2CQ9Y2T4 447 aa5.94□□□□□ -1.46
SCAF11-213ENST00000550629 USP15Q9Y4E8 981 aaPredicted RBP5.94□□□□□ -1.46
SCAF11-213ENST00000550629 SZT2Q5T011 3432 aa5.94□□□□□ -1.46
SCAF11-213ENST00000550629 PRRC2BQ5JSZ5 2229 aaKnown RBP5.94□□□□□ -1.46
SCAF11-213ENST00000550629 C2orf78A6NCI8 922 aa5.93□□□□□ -1.46
SCAF11-213ENST00000550629 H3BQ06 376 aaPredicted RBP5.93□□□□□ -1.46
SCAF11-213ENST00000550629 MBTPS2O43462 519 aa5.93□□□□□ -1.46
SCAF11-213ENST00000550629 FZD7O75084 574 aa5.93□□□□□ -1.46
SCAF11-213ENST00000550629 PROSCO94903 275 aa5.93□□□□□ -1.46
SCAF11-213ENST00000550629 LATS1O95835 1130 aa5.93□□□□□ -1.46
SCAF11-213ENST00000550629 IGLV3-27P01718 113 aa5.93□□□□□ -1.46
SCAF11-213ENST00000550629 LAMP2P13473 410 aa5.93□□□□□ -1.46
SCAF11-213ENST00000550629 CEBPBP17676 345 aa5.93□□□□□ -1.46
SCAF11-213ENST00000550629 POU3F2P20265 443 aaPredicted RBP5.93□□□□□ -1.46
SCAF11-213ENST00000550629 RDXP35241 583 aaKnown RBP5.93□□□□□ -1.46
SCAF11-213ENST00000550629 PCK1P35558 622 aa5.93□□□□□ -1.46
SCAF11-213ENST00000550629 AVPR1AP37288 418 aa5.93□□□□□ -1.46
SCAF11-213ENST00000550629 SLC1A1P43005 524 aa5.93□□□□□ -1.46
SCAF11-213ENST00000550629 CXCR3P49682 368 aa5.93□□□□□ -1.46
SCAF11-213ENST00000550629 PGFP49763 221 aa5.93□□□□□ -1.46
SCAF11-213ENST00000550629 AIF1P55008 147 aa5.93□□□□□ -1.46
SCAF11-213ENST00000550629 RPL7AP62424 266 aaKnown RBP5.93□□□□□ -1.46
SCAF11-213ENST00000550629 NTHL1P78549 312 aa5.93□□□□□ -1.46
SCAF11-213ENST00000550629 HGFACQ04756 655 aa5.93□□□□□ -1.46
SCAF11-213ENST00000550629 DUSP8Q13202 625 aa5.93□□□□□ -1.46
SCAF11-213ENST00000550629 EIF4EBP2Q13542 120 aaPredicted RBP5.93□□□□□ -1.46
SCAF11-213ENST00000550629 TEAD2Q15562 447 aa5.93□□□□□ -1.46
SCAF11-213ENST00000550629 CCDC14Q49A88 953 aa5.93□□□□□ -1.46
SCAF11-213ENST00000550629 C2CD6Q53TS8 623 aa5.93□□□□□ -1.46
SCAF11-213ENST00000550629 BRMS1LQ5PSV4 323 aa5.93□□□□□ -1.46
SCAF11-213ENST00000550629 GPR158Q5T848 1215 aa5.93□□□□□ -1.46
SCAF11-213ENST00000550629 SYPL2Q5VXT5 272 aa5.93□□□□□ -1.46
SCAF11-213ENST00000550629 NUGGCQ68CJ6 796 aa5.93□□□□□ -1.46
SCAF11-213ENST00000550629 TXNDC8Q6A555 127 aa5.93□□□□□ -1.46
SCAF11-213ENST00000550629 ESRP1Q6NXG1 681 aaKnown RBP5.93□□□□□ -1.46
SCAF11-213ENST00000550629 PSTKQ8IV42 348 aaKnown RBP5.93□□□□□ -1.46
SCAF11-213ENST00000550629 DEFB106AQ8N104 65 aa5.93□□□□□ -1.46
SCAF11-213ENST00000550629 NXPE1Q8N323 547 aa5.93□□□□□ -1.46
SCAF11-213ENST00000550629 CELF5Q8N6W0 485 aaKnown RBP5.93□□□□□ -1.46
SCAF11-213ENST00000550629 ACRBPQ8NEB7 543 aa5.93□□□□□ -1.46
SCAF11-213ENST00000550629 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.93□□□□□ -1.46
SCAF11-213ENST00000550629 ITFG1Q8TB96 612 aa5.93□□□□□ -1.46
SCAF11-213ENST00000550629 ZNF564Q8TBZ8 553 aaPredicted RBP5.93□□□□□ -1.46
SCAF11-213ENST00000550629 RXFP2Q8WXD0 754 aa5.93□□□□□ -1.46
SCAF11-213ENST00000550629 NDRG1Q92597 394 aaKnown RBP5.93□□□□□ -1.46
SCAF11-213ENST00000550629 FGF13Q92913 245 aa5.93□□□□□ -1.46
SCAF11-213ENST00000550629 SMARCD2Q92925 531 aa5.93□□□□□ -1.46
SCAF11-213ENST00000550629 AZIN2Q96A70 460 aa5.93□□□□□ -1.46
SCAF11-213ENST00000550629 ARHGEF26Q96DR7 871 aa5.93□□□□□ -1.46
SCAF11-213ENST00000550629 TRIM44Q96DX7 344 aaPredicted RBP5.93□□□□□ -1.46
SCAF11-213ENST00000550629 TCEAL4Q96EI5 215 aa5.93□□□□□ -1.46
SCAF11-213ENST00000550629 PIWIL1Q96J94 861 aaKnown RBP5.93□□□□□ -1.46
SCAF11-213ENST00000550629 TUBGCP5Q96RT8 1024 aa5.93□□□□□ -1.46
SCAF11-213ENST00000550629 DESI2Q9BSY9 194 aa5.93□□□□□ -1.46
SCAF11-213ENST00000550629 SLC46A2Q9BY10 475 aa5.93□□□□□ -1.46
SCAF11-213ENST00000550629 DCLK3Q9C098 648 aa5.93□□□□□ -1.46
SCAF11-213ENST00000550629 POMKQ9H5K3 350 aa5.93□□□□□ -1.46
SCAF11-213ENST00000550629 FAM204AQ9H8W3 233 aa5.93□□□□□ -1.46
SCAF11-213ENST00000550629 TDP1Q9NUW8 608 aa5.93□□□□□ -1.46
SCAF11-213ENST00000550629 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.93□□□□□ -1.46
SCAF11-213ENST00000550629 H2AFY2Q9P0M6 372 aaPredicted RBP5.93□□□□□ -1.46
SCAF11-213ENST00000550629 MYO1AQ9UBC5 1043 aa5.93□□□□□ -1.46
SCAF11-213ENST00000550629 ANAPC7Q9UJX3 599 aa5.93□□□□□ -1.46
SCAF11-213ENST00000550629 NAALADL1Q9UQQ1 740 aa5.93□□□□□ -1.46
SCAF11-213ENST00000550629 ZNF510Q9Y2H8 683 aa5.93□□□□□ -1.46
SCAF11-213ENST00000550629 ZKSCAN5Q9Y2L8 839 aa5.93□□□□□ -1.46
SCAF11-213ENST00000550629 SPO11Q9Y5K1 396 aa5.93□□□□□ -1.46
SCAF11-213ENST00000550629 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.93□□□□□ -1.46
SCAF11-213ENST00000550629 GREB1Q4ZG55 1949 aa5.92□□□□□ -1.46
SCAF11-213ENST00000550629 E2F8A0AVK6 867 aa5.92□□□□□ -1.46
SCAF11-213ENST00000550629 ANHXE9PGG2 379 aa5.92□□□□□ -1.46
SCAF11-213ENST00000550629 M0QYT0 321 aa5.92□□□□□ -1.46
SCAF11-213ENST00000550629 SLC9A3R1O14745 358 aaPredicted RBP5.92□□□□□ -1.46
SCAF11-213ENST00000550629 MUSKO15146 869 aa5.92□□□□□ -1.46
SCAF11-213ENST00000550629 IRAK2O43187 625 aa5.92□□□□□ -1.46
SCAF11-213ENST00000550629 ECI2O75521 394 aa5.92□□□□□ -1.46
SCAF11-213ENST00000550629 GRAP2O75791 330 aa5.92□□□□□ -1.46
SCAF11-213ENST00000550629 RNF8O76064 485 aa5.92□□□□□ -1.46
SCAF11-213ENST00000550629 TRUB2O95900 331 aaKnown RBP5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms