RNA–Protein interactions for RNA: ENST00000550274.1

LETMD1-222, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 809 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-222ENST00000550274 SUV39H2Q9H5I1 410 aa12.67□□□□□ -0.38
LETMD1-222ENST00000550274 FGF22Q9HCT0 170 aa12.67□□□□□ -0.38
LETMD1-222ENST00000550274 MRPL40Q9NQ50 206 aaKnown RBP12.67□□□□□ -0.38
LETMD1-222ENST00000550274 ADAM22Q9P0K1 906 aa12.67□□□□□ -0.38
LETMD1-222ENST00000550274 UBA2Q9UBT2 640 aaPredicted RBP12.67□□□□□ -0.38
LETMD1-222ENST00000550274 ACSL6Q9UKU0 697 aa12.67□□□□□ -0.38
LETMD1-222ENST00000550274 FZD10Q9ULW2 581 aa12.67□□□□□ -0.38
LETMD1-222ENST00000550274 LOXL2Q9Y4K0 774 aa12.67□□□□□ -0.38
LETMD1-222ENST00000550274 TCRBV5S1A1TA0A578 114 aa12.66□□□□□ -0.38
LETMD1-222ENST00000550274 TMEM202A6NGA9 273 aa12.66□□□□□ -0.38
LETMD1-222ENST00000550274 TMX2-CTNND1H3BSU7 103 aa12.66□□□□□ -0.38
LETMD1-222ENST00000550274 J3KR12 359 aa12.66□□□□□ -0.38
LETMD1-222ENST00000550274 ETV5P41161 510 aa12.66□□□□□ -0.38
LETMD1-222ENST00000550274 NSFP46459 744 aaKnown RBP12.66□□□□□ -0.38
LETMD1-222ENST00000550274 RPL7AP62424 266 aaKnown RBP12.66□□□□□ -0.38
LETMD1-222ENST00000550274 RALGDSQ12967 914 aa12.66□□□□□ -0.38
LETMD1-222ENST00000550274 NFATC3Q12968 1075 aa12.66□□□□□ -0.38
LETMD1-222ENST00000550274 MTM1Q13496 603 aa12.66□□□□□ -0.38
LETMD1-222ENST00000550274 CLEC16AQ2KHT3 1053 aa12.66□□□□□ -0.38
LETMD1-222ENST00000550274 CERCAMQ5T4B2 595 aa12.66□□□□□ -0.38
LETMD1-222ENST00000550274 MON1BQ7L1V2 547 aa12.66□□□□□ -0.38
LETMD1-222ENST00000550274 PRICKLE2Q7Z3G6 844 aa12.66□□□□□ -0.38
LETMD1-222ENST00000550274 TMPRSS9Q7Z410 1059 aa12.66□□□□□ -0.38
LETMD1-222ENST00000550274 PHF13Q86YI8 300 aaPredicted RBP12.66□□□□□ -0.38
LETMD1-222ENST00000550274 CAMK1DQ8IU85 385 aa12.66□□□□□ -0.38
LETMD1-222ENST00000550274 Q8N9G6 341 aaPredicted RBP12.66□□□□□ -0.38
LETMD1-222ENST00000550274 HCAR2Q8TDS4 363 aa12.66□□□□□ -0.38
LETMD1-222ENST00000550274 TMEM74Q96NL1 305 aa12.66□□□□□ -0.38
LETMD1-222ENST00000550274 LRRC19Q9H756 370 aa12.66□□□□□ -0.38
LETMD1-222ENST00000550274 CATSPERBQ9H7T0 1116 aa12.66□□□□□ -0.38
LETMD1-222ENST00000550274 DACH1Q9UI36 760 aa12.66□□□□□ -0.38
LETMD1-222ENST00000550274 ATP8A1Q9Y2Q0 1164 aa12.66□□□□□ -0.38
LETMD1-222ENST00000550274 DGKBQ9Y6T7 804 aa12.66□□□□□ -0.38
LETMD1-222ENST00000550274 PRAMEF33A0A0G2JMD5 474 aa12.65□□□□□ -0.38
LETMD1-222ENST00000550274 SIGLEC16A6NMB1 481 aa12.65□□□□□ -0.38
LETMD1-222ENST00000550274 NVLO15381 856 aaKnown RBP12.65□□□□□ -0.38
LETMD1-222ENST00000550274 PRAMEF10O60809 474 aa12.65□□□□□ -0.38
LETMD1-222ENST00000550274 PRAMEF11O60813 436 aa12.65□□□□□ -0.38
LETMD1-222ENST00000550274 WISP1O95388 367 aa12.65□□□□□ -0.38
LETMD1-222ENST00000550274 TNFP01375 233 aa12.65□□□□□ -0.38
LETMD1-222ENST00000550274 JMJD7P0C870 316 aa12.65□□□□□ -0.38
LETMD1-222ENST00000550274 LIPCP11150 499 aa12.65□□□□□ -0.38
LETMD1-222ENST00000550274 GM2AP17900 193 aa12.65□□□□□ -0.38
LETMD1-222ENST00000550274 ZNF143P52747 638 aaPredicted RBP12.65□□□□□ -0.38
LETMD1-222ENST00000550274 KCNC4Q03721 635 aa12.65□□□□□ -0.38
LETMD1-222ENST00000550274 ZFP36L1Q07352 338 aaKnown RBP12.65□□□□□ -0.38
LETMD1-222ENST00000550274 KRT31Q15323 416 aa12.65□□□□□ -0.38
LETMD1-222ENST00000550274 ERAP2Q6P179 960 aa12.65□□□□□ -0.38
LETMD1-222ENST00000550274 BRAT1Q6PJG6 821 aa12.65□□□□□ -0.38
LETMD1-222ENST00000550274 OGFOD3Q6PK18 319 aa12.65□□□□□ -0.38
LETMD1-222ENST00000550274 USP53Q70EK8 1073 aa12.65□□□□□ -0.38
LETMD1-222ENST00000550274 SPRED1Q7Z699 444 aa12.65□□□□□ -0.38
LETMD1-222ENST00000550274 VASH2Q86V25 355 aa12.65□□□□□ -0.38
LETMD1-222ENST00000550274 PELI3Q8N2H9 469 aa12.65□□□□□ -0.38
LETMD1-222ENST00000550274 FAM46DQ8NEK8 389 aa12.65□□□□□ -0.38
LETMD1-222ENST00000550274 OR6C4Q8NGE1 309 aa12.65□□□□□ -0.38
LETMD1-222ENST00000550274 OR56A4Q8NGH8 313 aa12.65□□□□□ -0.38
LETMD1-222ENST00000550274 ATL2Q8NHH9 583 aa12.65□□□□□ -0.38
LETMD1-222ENST00000550274 CCL4L1Q8NHW4 92 aa12.65□□□□□ -0.38
LETMD1-222ENST00000550274 EXTL1Q92935 676 aa12.65□□□□□ -0.38
LETMD1-222ENST00000550274 SGF29Q96ES7 293 aa12.65□□□□□ -0.38
LETMD1-222ENST00000550274 CELF6Q96J87 481 aaKnown RBP12.65□□□□□ -0.38
LETMD1-222ENST00000550274 ZNF641Q96N77 438 aaPredicted RBP12.65□□□□□ -0.38
LETMD1-222ENST00000550274 MCEEQ96PE7 176 aa12.65□□□□□ -0.38
LETMD1-222ENST00000550274 TRIM4Q9C037 500 aa12.65□□□□□ -0.38
LETMD1-222ENST00000550274 TMEM168Q9H0V1 697 aa12.65□□□□□ -0.38
LETMD1-222ENST00000550274 FOXJ2Q9P0K8 574 aa12.65□□□□□ -0.38
LETMD1-222ENST00000550274 APPL1Q9UKG1 709 aa12.65□□□□□ -0.38
LETMD1-222ENST00000550274 SIK3Q9Y2K2 1263 aa12.65□□□□□ -0.38
LETMD1-222ENST00000550274 RNF215Q9Y6U7 377 aa12.65□□□□□ -0.38
LETMD1-222ENST00000550274 NBASA2RRP1 2371 aa12.65□□□□□ -0.38
LETMD1-222ENST00000550274 B4DGG1 531 aa12.64□□□□□ -0.39
LETMD1-222ENST00000550274 FGF10O15520 208 aaPredicted RBP12.64□□□□□ -0.39
LETMD1-222ENST00000550274 RECQL5O94762 991 aaPredicted RBP12.64□□□□□ -0.39
LETMD1-222ENST00000550274 CALB1P05937 261 aa12.64□□□□□ -0.39
LETMD1-222ENST00000550274 GLB1P16278 677 aa12.64□□□□□ -0.39
LETMD1-222ENST00000550274 WT1P19544 449 aaPredicted RBP12.64□□□□□ -0.39
LETMD1-222ENST00000550274 STAT1P42224 750 aa12.64□□□□□ -0.39
LETMD1-222ENST00000550274 KIAA1024LP59773 190 aa12.64□□□□□ -0.39
LETMD1-222ENST00000550274 NFKB2Q00653 900 aa12.64□□□□□ -0.39
LETMD1-222ENST00000550274 OGDHQ02218 1023 aa12.64□□□□□ -0.39
LETMD1-222ENST00000550274 HLTFQ14527 1009 aaKnown RBP eCLIP12.64□□□□□ -0.39
LETMD1-222ENST00000550274 GRM3Q14832 879 aa12.64□□□□□ -0.39
LETMD1-222ENST00000550274 C14orf28Q4W4Y0 310 aa12.64□□□□□ -0.39
LETMD1-222ENST00000550274 PPP1R15BQ5SWA1 713 aa12.64□□□□□ -0.39
LETMD1-222ENST00000550274 CFAP58Q5T655 872 aa12.64□□□□□ -0.39
LETMD1-222ENST00000550274 CDKAL1Q5VV42 579 aa12.64□□□□□ -0.39
LETMD1-222ENST00000550274 DNAJC24Q6P3W2 148 aa12.64□□□□□ -0.39
LETMD1-222ENST00000550274 TAF8Q7Z7C8 310 aa12.64□□□□□ -0.39
LETMD1-222ENST00000550274 SRLQ86TD4 932 aa12.64□□□□□ -0.39
LETMD1-222ENST00000550274 ZFAND4Q86XD8 727 aa12.64□□□□□ -0.39
LETMD1-222ENST00000550274 SLITRK4Q8IW52 837 aa12.64□□□□□ -0.39
LETMD1-222ENST00000550274 TSEN2Q8NCE0 465 aaKnown RBP12.64□□□□□ -0.39
LETMD1-222ENST00000550274 NSMCE3Q96MG7 304 aa12.64□□□□□ -0.39
LETMD1-222ENST00000550274 TUBGCP5Q96RT8 1024 aa12.64□□□□□ -0.39
LETMD1-222ENST00000550274 LGR4Q9BXB1 951 aa12.64□□□□□ -0.39
LETMD1-222ENST00000550274 SLC39A8Q9C0K1 460 aa12.64□□□□□ -0.39
LETMD1-222ENST00000550274 GPATCH2LQ9NWQ4 482 aa12.64□□□□□ -0.39
LETMD1-222ENST00000550274 LRRK2Q5S007 2527 aa12.63□□□□□ -0.39
LETMD1-222ENST00000550274 C9orf172C9J069 976 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms