RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 HGSNATQ68CP4 663 aa10.94□□□□□ -0.66
VTI1BP3-201ENST00000550220 IGF2-ASQ6U949 168 aa10.94□□□□□ -0.66
VTI1BP3-201ENST00000550220 ENPP7Q6UWV6 458 aa10.94□□□□□ -0.66
VTI1BP3-201ENST00000550220 RBM44Q6ZP01 1051 aaKnown RBP10.94□□□□□ -0.66
VTI1BP3-201ENST00000550220 CYP4V2Q6ZWL3 525 aaPredicted RBP10.94□□□□□ -0.66
VTI1BP3-201ENST00000550220 DPPA4Q7L190 304 aa10.94□□□□□ -0.66
VTI1BP3-201ENST00000550220 HID1Q8IV36 788 aa10.94□□□□□ -0.66
VTI1BP3-201ENST00000550220 NPWQ8N729 165 aa10.94□□□□□ -0.66
VTI1BP3-201ENST00000550220 ARL10Q8N8L6 244 aa10.94□□□□□ -0.66
VTI1BP3-201ENST00000550220 NETO2Q8NC67 525 aa10.94□□□□□ -0.66
VTI1BP3-201ENST00000550220 ZNF248Q8NDW4 579 aa10.94□□□□□ -0.66
VTI1BP3-201ENST00000550220 WDR92Q96MX6 357 aa10.94□□□□□ -0.66
VTI1BP3-201ENST00000550220 DCBLD2Q96PD2 775 aa10.94□□□□□ -0.66
VTI1BP3-201ENST00000550220 CSPG4P5Q96PW8 444 aa10.94□□□□□ -0.66
VTI1BP3-201ENST00000550220 LRRC61Q9BV99 259 aa10.94□□□□□ -0.66
VTI1BP3-201ENST00000550220 TRIM7Q9C029 511 aa10.94□□□□□ -0.66
VTI1BP3-201ENST00000550220 CBX8Q9HC52 389 aa10.94□□□□□ -0.66
VTI1BP3-201ENST00000550220 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.94□□□□□ -0.66
VTI1BP3-201ENST00000550220 KLQ9UEF7 1012 aa10.94□□□□□ -0.66
VTI1BP3-201ENST00000550220 RALYQ9UKM9 306 aaKnown RBP10.94□□□□□ -0.66
VTI1BP3-201ENST00000550220 PADI4Q9UM07 663 aa10.94□□□□□ -0.66
VTI1BP3-201ENST00000550220 DGKBQ9Y6T7 804 aa10.94□□□□□ -0.66
VTI1BP3-201ENST00000550220 ASXL3Q9C0F0 2248 aa10.94□□□□□ -0.66
VTI1BP3-201ENST00000550220 EIF4E1BA6NMX2 242 aaKnown RBP10.93□□□□□ -0.66
VTI1BP3-201ENST00000550220 TRAFD1O14545 582 aaPredicted RBP10.93□□□□□ -0.66
VTI1BP3-201ENST00000550220 HTRA2O43464 458 aaPredicted RBP10.93□□□□□ -0.66
VTI1BP3-201ENST00000550220 RECQL5O94762 991 aaPredicted RBP10.93□□□□□ -0.66
VTI1BP3-201ENST00000550220 CYP1A2P05177 515 aa10.93□□□□□ -0.66
VTI1BP3-201ENST00000550220 CYP2A6P11509 494 aaPredicted RBP10.93□□□□□ -0.66
VTI1BP3-201ENST00000550220 AMPD1P23109 780 aa10.93□□□□□ -0.66
VTI1BP3-201ENST00000550220 RBMS1P29558 406 aaKnown RBP10.93□□□□□ -0.66
VTI1BP3-201ENST00000550220 TRIM23P36406 574 aa10.93□□□□□ -0.66
VTI1BP3-201ENST00000550220 PBX1P40424 430 aa10.93□□□□□ -0.66
VTI1BP3-201ENST00000550220 RGRP47804 291 aa10.93□□□□□ -0.66
VTI1BP3-201ENST00000550220 PCBP4P57723 403 aaKnown RBP10.93□□□□□ -0.66
VTI1BP3-201ENST00000550220 KIAA1024LP59773 190 aa10.93□□□□□ -0.66
VTI1BP3-201ENST00000550220 SLC10A7Q0GE19 358 aa10.93□□□□□ -0.66
VTI1BP3-201ENST00000550220 C1orf61Q13536 156 aa10.93□□□□□ -0.66
VTI1BP3-201ENST00000550220 PEX6Q13608 980 aa10.93□□□□□ -0.66
VTI1BP3-201ENST00000550220 KRT81Q14533 505 aa10.93□□□□□ -0.66
VTI1BP3-201ENST00000550220 CCDC122Q5T0U0 273 aa10.93□□□□□ -0.66
VTI1BP3-201ENST00000550220 MARC1Q5VT66 337 aa10.93□□□□□ -0.66
VTI1BP3-201ENST00000550220 ALKBH5Q6P6C2 394 aaKnown RBP10.93□□□□□ -0.66
VTI1BP3-201ENST00000550220 LIPIQ6XZB0 460 aa10.93□□□□□ -0.66
VTI1BP3-201ENST00000550220 LUZP1Q86V48 1076 aa10.93□□□□□ -0.66
VTI1BP3-201ENST00000550220 MAP7D3Q8IWC1 876 aa10.93□□□□□ -0.66
VTI1BP3-201ENST00000550220 RBFAQ8N0V3 343 aa10.93□□□□□ -0.66
VTI1BP3-201ENST00000550220 ATPAF2Q8N5M1 289 aa10.93□□□□□ -0.66
VTI1BP3-201ENST00000550220 HSPH1Q92598 858 aa10.93□□□□□ -0.66
VTI1BP3-201ENST00000550220 NUDCD1Q96RS6 583 aa10.93□□□□□ -0.66
VTI1BP3-201ENST00000550220 NUP85Q9BW27 656 aa10.93□□□□□ -0.66
VTI1BP3-201ENST00000550220 THAP2Q9H0W7 228 aa10.93□□□□□ -0.66
VTI1BP3-201ENST00000550220 THSD1Q9NS62 852 aa10.93□□□□□ -0.66
VTI1BP3-201ENST00000550220 ANAPC7Q9UJX3 599 aa10.93□□□□□ -0.66
VTI1BP3-201ENST00000550220 PHTF1Q9UMS5 762 aa10.93□□□□□ -0.66
VTI1BP3-201ENST00000550220 PCDHGA8Q9Y5G5 932 aa10.93□□□□□ -0.66
VTI1BP3-201ENST00000550220 ATRXP46100 2492 aa10.93□□□□□ -0.66
VTI1BP3-201ENST00000550220 LAMA5O15230 3695 aa10.92□□□□□ -0.66
VTI1BP3-201ENST00000550220 PSMD11O00231 422 aa10.92□□□□□ -0.66
VTI1BP3-201ENST00000550220 MUSKO15146 869 aa10.92□□□□□ -0.66
VTI1BP3-201ENST00000550220 ZW10O43264 779 aa10.92□□□□□ -0.66
VTI1BP3-201ENST00000550220 TLX3O43711 291 aaPredicted RBP10.92□□□□□ -0.66
VTI1BP3-201ENST00000550220 MAFKO60675 156 aa10.92□□□□□ -0.66
VTI1BP3-201ENST00000550220 PCCBP05166 539 aa10.92□□□□□ -0.66
VTI1BP3-201ENST00000550220 CR2P20023 1033 aa10.92□□□□□ -0.66
VTI1BP3-201ENST00000550220 TGM2P21980 687 aa10.92□□□□□ -0.66
VTI1BP3-201ENST00000550220 IL1R2P27930 398 aa10.92□□□□□ -0.66
VTI1BP3-201ENST00000550220 MMP13P45452 471 aa10.92□□□□□ -0.66
VTI1BP3-201ENST00000550220 UCNP55089 124 aa10.92□□□□□ -0.66
VTI1BP3-201ENST00000550220 GABREP78334 506 aa10.92□□□□□ -0.66
VTI1BP3-201ENST00000550220 EIF3IQ13347 325 aaKnown RBP10.92□□□□□ -0.66
VTI1BP3-201ENST00000550220 SPIDRQ14159 915 aa10.92□□□□□ -0.66
VTI1BP3-201ENST00000550220 ACOX1Q15067 660 aa10.92□□□□□ -0.66
VTI1BP3-201ENST00000550220 PDK2Q15119 407 aa10.92□□□□□ -0.66
VTI1BP3-201ENST00000550220 ALG11Q2TAA5 492 aa10.92□□□□□ -0.66
VTI1BP3-201ENST00000550220 SMTNL2Q2TAL5 461 aa10.92□□□□□ -0.66
VTI1BP3-201ENST00000550220 SKOR2Q2VWA4 1001 aaPredicted RBP10.92□□□□□ -0.66
VTI1BP3-201ENST00000550220 BROXQ5VW32 411 aa10.92□□□□□ -0.66
VTI1BP3-201ENST00000550220 TIGD7Q6NT04 549 aaPredicted RBP10.92□□□□□ -0.66
VTI1BP3-201ENST00000550220 GUSBP11Q6P575 273 aa10.92□□□□□ -0.66
VTI1BP3-201ENST00000550220 ARHGAP36Q6ZRI8 547 aa10.92□□□□□ -0.66
VTI1BP3-201ENST00000550220 RD3Q7Z3Z2 195 aa10.92□□□□□ -0.66
VTI1BP3-201ENST00000550220 ZSWIM9Q86XI8 627 aa10.92□□□□□ -0.66
VTI1BP3-201ENST00000550220 SLC35F3Q8IY50 421 aa10.92□□□□□ -0.66
VTI1BP3-201ENST00000550220 ARL14Q8N4G2 192 aa10.92□□□□□ -0.66
VTI1BP3-201ENST00000550220 LSM14AQ8ND56 463 aaKnown RBP10.92□□□□□ -0.66
VTI1BP3-201ENST00000550220 OR56A4Q8NGH8 313 aa10.92□□□□□ -0.66
VTI1BP3-201ENST00000550220 CPLX3Q8WVH0 158 aa10.92□□□□□ -0.66
VTI1BP3-201ENST00000550220 TSACCQ96A04 125 aaPredicted RBP10.92□□□□□ -0.66
VTI1BP3-201ENST00000550220 CCDC97Q96F63 343 aaPredicted RBP10.92□□□□□ -0.66
VTI1BP3-201ENST00000550220 UBL7Q96S82 380 aaPredicted RBP10.92□□□□□ -0.66
VTI1BP3-201ENST00000550220 RBM15Q96T37 977 aaKnown RBP eCLIP10.92□□□□□ -0.66
VTI1BP3-201ENST00000550220 MGME1Q9BQP7 344 aa10.92□□□□□ -0.66
VTI1BP3-201ENST00000550220 CLPBQ9H078 707 aa10.92□□□□□ -0.66
VTI1BP3-201ENST00000550220 TCEAL2Q9H3H9 227 aaPredicted RBP10.92□□□□□ -0.66
VTI1BP3-201ENST00000550220 WDR26Q9H7D7 661 aa10.92□□□□□ -0.66
VTI1BP3-201ENST00000550220 PCDH18Q9HCL0 1135 aa10.92□□□□□ -0.66
VTI1BP3-201ENST00000550220 UVRAGQ9P2Y5 699 aa10.92□□□□□ -0.66
VTI1BP3-201ENST00000550220 GULP1Q9UBP9 304 aa10.92□□□□□ -0.66
VTI1BP3-201ENST00000550220 AMACRQ9UHK6 382 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms