RNA–Protein interactions for RNA: ENST00000549274.1

SMARCD1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-206ENST00000549274 CPT1BQ92523 772 aa9.82□□□□□ -0.84
SMARCD1-206ENST00000549274 FAM131CQ96AQ9 280 aa9.82□□□□□ -0.84
SMARCD1-206ENST00000549274 MCCC1Q96RQ3 725 aaPredicted RBP9.82□□□□□ -0.84
SMARCD1-206ENST00000549274 TRIB3Q96RU7 358 aa9.82□□□□□ -0.84
SMARCD1-206ENST00000549274 TRIM51Q9BSJ1 452 aa9.82□□□□□ -0.84
SMARCD1-206ENST00000549274 MKRN2Q9H000 416 aaKnown RBP9.82□□□□□ -0.84
SMARCD1-206ENST00000549274 BTBD1Q9H0C5 482 aa9.82□□□□□ -0.84
SMARCD1-206ENST00000549274 EPB41L5Q9HCM4 733 aa9.82□□□□□ -0.84
SMARCD1-206ENST00000549274 CASS4Q9NQ75 786 aa9.82□□□□□ -0.84
SMARCD1-206ENST00000549274 ITM2CQ9NQX7 267 aa9.82□□□□□ -0.84
SMARCD1-206ENST00000549274 USP36Q9P275 1121 aaKnown RBP9.82□□□□□ -0.84
SMARCD1-206ENST00000549274 RIMKLBQ9ULI2 386 aa9.82□□□□□ -0.84
SMARCD1-206ENST00000549274 CHKBQ9Y259 395 aa9.82□□□□□ -0.84
SMARCD1-206ENST00000549274 ZDBF2Q9HCK1 2354 aa9.82□□□□□ -0.84
SMARCD1-206ENST00000549274 NDUFS2O75306 463 aa9.81□□□□□ -0.84
SMARCD1-206ENST00000549274 RNASEH2AO75792 299 aaKnown RBP9.81□□□□□ -0.84
SMARCD1-206ENST00000549274 TTC4O95801 387 aa9.81□□□□□ -0.84
SMARCD1-206ENST00000549274 PAMP19021 973 aa9.81□□□□□ -0.84
SMARCD1-206ENST00000549274 COL9A1P20849 921 aa9.81□□□□□ -0.84
SMARCD1-206ENST00000549274 TNFRSF8P28908 595 aa9.81□□□□□ -0.84
SMARCD1-206ENST00000549274 HADHAP40939 763 aa9.81□□□□□ -0.84
SMARCD1-206ENST00000549274 P2RY2P41231 377 aa9.81□□□□□ -0.84
SMARCD1-206ENST00000549274 DPP6P42658 865 aa9.81□□□□□ -0.84
SMARCD1-206ENST00000549274 RPL21P46778 160 aaKnown RBP9.81□□□□□ -0.84
SMARCD1-206ENST00000549274 ITGA8P53708 1063 aa9.81□□□□□ -0.84
SMARCD1-206ENST00000549274 PTPN5P54829 565 aa9.81□□□□□ -0.84
SMARCD1-206ENST00000549274 RPS21P63220 83 aaKnown RBP9.81□□□□□ -0.84
SMARCD1-206ENST00000549274 ILF2Q12905 390 aaKnown RBP9.81□□□□□ -0.84
SMARCD1-206ENST00000549274 CBLBQ13191 982 aa9.81□□□□□ -0.84
SMARCD1-206ENST00000549274 GAS6Q14393 721 aa9.81□□□□□ -0.84
SMARCD1-206ENST00000549274 HLTFQ14527 1009 aaKnown RBP eCLIP9.81□□□□□ -0.84
SMARCD1-206ENST00000549274 MAP7D1Q3KQU3 841 aa9.81□□□□□ -0.84
SMARCD1-206ENST00000549274 MAP9Q49MG5 647 aa9.81□□□□□ -0.84
SMARCD1-206ENST00000549274 SIRPB2Q5JXA9 342 aa9.81□□□□□ -0.84
SMARCD1-206ENST00000549274 TMEM31Q5JXX7 168 aa9.81□□□□□ -0.84
SMARCD1-206ENST00000549274 SPDYCQ5MJ68 293 aa9.81□□□□□ -0.84
SMARCD1-206ENST00000549274 FAXCQ5TGI0 409 aa9.81□□□□□ -0.84
SMARCD1-206ENST00000549274 DPPA4Q7L190 304 aa9.81□□□□□ -0.84
SMARCD1-206ENST00000549274 WDR5BQ86VZ2 330 aa9.81□□□□□ -0.84
SMARCD1-206ENST00000549274 ZCCHC9Q8N567 271 aaKnown RBP9.81□□□□□ -0.84
SMARCD1-206ENST00000549274 GLIS1Q8NBF1 620 aa9.81□□□□□ -0.84
SMARCD1-206ENST00000549274 OR2T34Q8NGX1 318 aa9.81□□□□□ -0.84
SMARCD1-206ENST00000549274 FAM174AQ8TBP5 190 aa9.81□□□□□ -0.84
SMARCD1-206ENST00000549274 BRSK1Q8TDC3 778 aa9.81□□□□□ -0.84
SMARCD1-206ENST00000549274 CXorf40AQ8TE69 158 aa9.81□□□□□ -0.84
SMARCD1-206ENST00000549274 PIH1D2Q8WWB5 315 aa9.81□□□□□ -0.84
SMARCD1-206ENST00000549274 HHIPQ96QV1 700 aa9.81□□□□□ -0.84
SMARCD1-206ENST00000549274 RANBP9Q96S59 729 aa9.81□□□□□ -0.84
SMARCD1-206ENST00000549274 FMO2Q99518 471 aa9.81□□□□□ -0.84
SMARCD1-206ENST00000549274 TRIM31Q9BZY9 425 aa9.81□□□□□ -0.84
SMARCD1-206ENST00000549274 DPH5Q9H2P9 285 aa9.81□□□□□ -0.84
SMARCD1-206ENST00000549274 MRM3Q9HC36 420 aaKnown RBP9.81□□□□□ -0.84
SMARCD1-206ENST00000549274 UBP1Q9NZI7 540 aa9.81□□□□□ -0.84
SMARCD1-206ENST00000549274 PKD2L2Q9NZM6 624 aa9.81□□□□□ -0.84
SMARCD1-206ENST00000549274 SNX24Q9Y343 169 aa9.81□□□□□ -0.84
SMARCD1-206ENST00000549274 PKP3Q9Y446 797 aa9.81□□□□□ -0.84
SMARCD1-206ENST00000549274 TRPM6Q9BX84 2022 aa9.8□□□□□ -0.84
SMARCD1-206ENST00000549274 A0A1W2PP55 124 aa9.8□□□□□ -0.84
SMARCD1-206ENST00000549274 SDR42E2A6NKP2 422 aa9.8□□□□□ -0.84
SMARCD1-206ENST00000549274 PLRG1O43660 514 aaKnown RBP9.8□□□□□ -0.84
SMARCD1-206ENST00000549274 SPAG6O75602 509 aa9.8□□□□□ -0.84
SMARCD1-206ENST00000549274 RHOXF2BP0C7M4 288 aa9.8□□□□□ -0.84
SMARCD1-206ENST00000549274 ATXN1LP0C7T5 689 aaKnown RBP9.8□□□□□ -0.84
SMARCD1-206ENST00000549274 ELFN1P0C7U0 828 aa9.8□□□□□ -0.84
SMARCD1-206ENST00000549274 TIMP2P16035 220 aa9.8□□□□□ -0.84
SMARCD1-206ENST00000549274 ADRA1DP25100 572 aa9.8□□□□□ -0.84
SMARCD1-206ENST00000549274 IVDP26440 423 aa9.8□□□□□ -0.84
SMARCD1-206ENST00000549274 CD6P30203 668 aa9.8□□□□□ -0.84
SMARCD1-206ENST00000549274 AVPR2P30518 371 aa9.8□□□□□ -0.84
SMARCD1-206ENST00000549274 DRD3P35462 400 aa9.8□□□□□ -0.84
SMARCD1-206ENST00000549274 MMP12P39900 470 aa9.8□□□□□ -0.84
SMARCD1-206ENST00000549274 TPMTP51580 245 aa9.8□□□□□ -0.84
SMARCD1-206ENST00000549274 PLTPP55058 493 aa9.8□□□□□ -0.84
SMARCD1-206ENST00000549274 CNTN1Q12860 1018 aa9.8□□□□□ -0.84
SMARCD1-206ENST00000549274 GALNT3Q14435 633 aa9.8□□□□□ -0.84
SMARCD1-206ENST00000549274 SLMAPQ14BN4 828 aa9.8□□□□□ -0.84
SMARCD1-206ENST00000549274 TAF1AQ15573 450 aaPredicted RBP9.8□□□□□ -0.84
SMARCD1-206ENST00000549274 QPCTQ16769 361 aa9.8□□□□□ -0.84
SMARCD1-206ENST00000549274 SKIDA1Q1XH10 827 aa9.8□□□□□ -0.84
SMARCD1-206ENST00000549274 TMEM52BQ4KMG9 183 aa9.8□□□□□ -0.84
SMARCD1-206ENST00000549274 PCID2Q5JVF3 399 aa9.8□□□□□ -0.84
SMARCD1-206ENST00000549274 AGBL4Q5VU57 503 aa9.8□□□□□ -0.84
SMARCD1-206ENST00000549274 PKN3Q6P5Z2 889 aa9.8□□□□□ -0.84
SMARCD1-206ENST00000549274 ZC3H14Q6PJT7 736 aaKnown RBP9.8□□□□□ -0.84
SMARCD1-206ENST00000549274 GLT6D1Q7Z4J2 308 aa9.8□□□□□ -0.84
SMARCD1-206ENST00000549274 LONP2Q86WA8 852 aa9.8□□□□□ -0.84
SMARCD1-206ENST00000549274 NRSN1Q8IZ57 195 aa9.8□□□□□ -0.84
SMARCD1-206ENST00000549274 MDGA1Q8NFP4 955 aa9.8□□□□□ -0.84
SMARCD1-206ENST00000549274 CADM4Q8NFZ8 388 aa9.8□□□□□ -0.84
SMARCD1-206ENST00000549274 STYXQ8WUJ0 223 aa9.8□□□□□ -0.84
SMARCD1-206ENST00000549274 ASB12Q8WXK4 309 aa9.8□□□□□ -0.84
SMARCD1-206ENST00000549274 FOXJ1Q92949 421 aa9.8□□□□□ -0.84
SMARCD1-206ENST00000549274 ART4Q93070 314 aa9.8□□□□□ -0.84
SMARCD1-206ENST00000549274 ARRDC3Q96B67 414 aa9.8□□□□□ -0.84
SMARCD1-206ENST00000549274 CCDC97Q96F63 343 aaPredicted RBP9.8□□□□□ -0.84
SMARCD1-206ENST00000549274 TTC25Q96NG3 672 aa9.8□□□□□ -0.84
SMARCD1-206ENST00000549274 SERPINB12Q96P63 405 aa9.8□□□□□ -0.84
SMARCD1-206ENST00000549274 RHOXF2Q9BQY4 288 aa9.8□□□□□ -0.84
SMARCD1-206ENST00000549274 COL25A1Q9BXS0 654 aaPredicted RBP9.8□□□□□ -0.84
SMARCD1-206ENST00000549274 GPR63Q9BZJ6 419 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms