RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 ERP27Q96DN0 273 aa4.93□□□□□ -1.62
SCAF11-212ENST00000549162 DEFB118Q96PH6 123 aa4.93□□□□□ -1.62
SCAF11-212ENST00000549162 NELL2Q99435 816 aa4.93□□□□□ -1.62
SCAF11-212ENST00000549162 ELAC2Q9BQ52 826 aaKnown RBP4.93□□□□□ -1.62
SCAF11-212ENST00000549162 MENTQ9BUN1 341 aa4.93□□□□□ -1.62
SCAF11-212ENST00000549162 C1orf21Q9H246 121 aa4.93□□□□□ -1.62
SCAF11-212ENST00000549162 MMRN2Q9H8L6 949 aa4.93□□□□□ -1.62
SCAF11-212ENST00000549162 GLOD4Q9HC38 313 aa4.93□□□□□ -1.62
SCAF11-212ENST00000549162 TAS2R13Q9NYV9 303 aa4.93□□□□□ -1.62
SCAF11-212ENST00000549162 SPATA7Q9P0W8 599 aa4.93□□□□□ -1.62
SCAF11-212ENST00000549162 SUN2Q9UH99 717 aa4.93□□□□□ -1.62
SCAF11-212ENST00000549162 MTF2Q9Y483 593 aaPredicted RBP4.93□□□□□ -1.62
SCAF11-212ENST00000549162 IKBKGQ9Y6K9 419 aa4.93□□□□□ -1.62
SCAF11-212ENST00000549162 PIAS3Q9Y6X2 628 aa4.93□□□□□ -1.62
SCAF11-212ENST00000549162 TRAV19A0A0A6YYK7 116 aa4.92□□□□□ -1.62
SCAF11-212ENST00000549162 YJEFN3A6XGL0 299 aa4.92□□□□□ -1.62
SCAF11-212ENST00000549162 E7ENQ6 273 aa4.92□□□□□ -1.62
SCAF11-212ENST00000549162 TOX3O15405 576 aaPredicted RBP4.92□□□□□ -1.62
SCAF11-212ENST00000549162 NOBOXO60393 691 aa4.92□□□□□ -1.62
SCAF11-212ENST00000549162 URODP06132 367 aa4.92□□□□□ -1.62
SCAF11-212ENST00000549162 CYP2F1P24903 491 aa4.92□□□□□ -1.62
SCAF11-212ENST00000549162 ADRA1DP25100 572 aa4.92□□□□□ -1.62
SCAF11-212ENST00000549162 ATP5C1P36542 298 aaKnown RBP4.92□□□□□ -1.62
SCAF11-212ENST00000549162 HSD17B2P37059 387 aa4.92□□□□□ -1.62
SCAF11-212ENST00000549162 ID4P47928 161 aa4.92□□□□□ -1.62
SCAF11-212ENST00000549162 OVGP1Q12889 678 aa4.92□□□□□ -1.62
SCAF11-212ENST00000549162 PCBP2Q15366 365 aaKnown RBP eCLIP4.92□□□□□ -1.62
SCAF11-212ENST00000549162 TOMM20Q15388 145 aa4.92□□□□□ -1.62
SCAF11-212ENST00000549162 GALNTL6Q49A17 601 aa4.92□□□□□ -1.62
SCAF11-212ENST00000549162 NAA35Q5VZE5 725 aa4.92□□□□□ -1.62
SCAF11-212ENST00000549162 GAREM2Q75VX8 874 aa4.92□□□□□ -1.62
SCAF11-212ENST00000549162 PEX26Q7Z412 305 aa4.92□□□□□ -1.62
SCAF11-212ENST00000549162 PRPF39Q86UA1 669 aaKnown RBP4.92□□□□□ -1.62
SCAF11-212ENST00000549162 STK40Q8N2I9 435 aa4.92□□□□□ -1.62
SCAF11-212ENST00000549162 TCAIMQ8N3R3 496 aa4.92□□□□□ -1.62
SCAF11-212ENST00000549162 CAMKK1Q8N5S9 505 aa4.92□□□□□ -1.62
SCAF11-212ENST00000549162 NATD1Q8N6N6 113 aa4.92□□□□□ -1.62
SCAF11-212ENST00000549162 TFB1MQ8WVM0 346 aaKnown RBP4.92□□□□□ -1.62
SCAF11-212ENST00000549162 NECAB3Q96P71 396 aaPredicted RBP4.92□□□□□ -1.62
SCAF11-212ENST00000549162 LRRC1Q9BTT6 524 aa4.92□□□□□ -1.62
SCAF11-212ENST00000549162 FAM207AQ9NSI2 230 aaPredicted RBP4.92□□□□□ -1.62
SCAF11-212ENST00000549162 OGFRQ9NZT2 677 aa4.92□□□□□ -1.62
SCAF11-212ENST00000549162 CTNNAL1Q9UBT7 734 aa4.92□□□□□ -1.62
SCAF11-212ENST00000549162 DNAJB4Q9UDY4 337 aa4.92□□□□□ -1.62
SCAF11-212ENST00000549162 PCDHB10Q9UN67 800 aa4.92□□□□□ -1.62
SCAF11-212ENST00000549162 KCNE1BA0A087WTH5 132 aa4.92□□□□□ -1.62
SCAF11-212ENST00000549162 A6NCN8 305 aa4.92□□□□□ -1.62
SCAF11-212ENST00000549162 A8MXQ7 604 aa4.92□□□□□ -1.62
SCAF11-212ENST00000549162 M0QYV0 167 aa4.92□□□□□ -1.62
SCAF11-212ENST00000549162 BIN1O00499 593 aa4.92□□□□□ -1.62
SCAF11-212ENST00000549162 PRICKLE3O43900 615 aaPredicted RBP4.92□□□□□ -1.62
SCAF11-212ENST00000549162 NUAK1O60285 661 aa4.92□□□□□ -1.62
SCAF11-212ENST00000549162 ANKRD34CP0C6C1 535 aa4.92□□□□□ -1.62
SCAF11-212ENST00000549162 HSD3B1P14060 373 aa4.92□□□□□ -1.62
SCAF11-212ENST00000549162 HRH2P25021 359 aa4.92□□□□□ -1.62
SCAF11-212ENST00000549162 ARNTP27540 789 aa4.92□□□□□ -1.62
SCAF11-212ENST00000549162 LCN1P31025 176 aa4.92□□□□□ -1.62
SCAF11-212ENST00000549162 YPEL5P62699 121 aa4.92□□□□□ -1.62
SCAF11-212ENST00000549162 DEFB103AP81534 67 aa4.92□□□□□ -1.62
SCAF11-212ENST00000549162 FNDC3BQ53EP0 1204 aaKnown RBP4.92□□□□□ -1.62
SCAF11-212ENST00000549162 PCID2Q5JVF3 399 aa4.92□□□□□ -1.62
SCAF11-212ENST00000549162 PLEKHS1Q5SXH7 462 aa4.92□□□□□ -1.62
SCAF11-212ENST00000549162 OGFOD2Q6N063 350 aa4.92□□□□□ -1.62
SCAF11-212ENST00000549162 OGFOD3Q6PK18 319 aa4.92□□□□□ -1.62
SCAF11-212ENST00000549162 GLRX5Q86SX6 157 aa4.92□□□□□ -1.62
SCAF11-212ENST00000549162 NKAPQ8N5F7 415 aaKnown RBP4.92□□□□□ -1.62
SCAF11-212ENST00000549162 TRAM1L1Q8N609 369 aa4.92□□□□□ -1.62
SCAF11-212ENST00000549162 C19orf47Q8N9M1 422 aaKnown RBP4.92□□□□□ -1.62
SCAF11-212ENST00000549162 HTR3CQ8WXA8 447 aa4.92□□□□□ -1.62
SCAF11-212ENST00000549162 ATP2A3Q93084 1043 aa4.92□□□□□ -1.62
SCAF11-212ENST00000549162 MRGPRX2Q96LB1 330 aa4.92□□□□□ -1.62
SCAF11-212ENST00000549162 RIPOR3Q96MK2 946 aa4.92□□□□□ -1.62
SCAF11-212ENST00000549162 TMEM237Q96Q45 408 aa4.92□□□□□ -1.62
SCAF11-212ENST00000549162 CTRCQ99895 268 aa4.92□□□□□ -1.62
SCAF11-212ENST00000549162 TCAF1Q9Y4C2 921 aa4.92□□□□□ -1.62
SCAF11-212ENST00000549162 PRRT4C9JH25 899 aa4.92□□□□□ -1.62
SCAF11-212ENST00000549162 PI4K2BG5E9Z4 385 aa4.92□□□□□ -1.62
SCAF11-212ENST00000549162 DDX39AO00148 427 aaKnown RBP4.92□□□□□ -1.62
SCAF11-212ENST00000549162 MAN2B1O00754 1011 aa4.92□□□□□ -1.62
SCAF11-212ENST00000549162 CLGNO14967 610 aa4.92□□□□□ -1.62
SCAF11-212ENST00000549162 LDB2O43679 373 aa4.92□□□□□ -1.62
SCAF11-212ENST00000549162 WFS1O76024 890 aa4.92□□□□□ -1.62
SCAF11-212ENST00000549162 IPO7O95373 1038 aaKnown RBP4.92□□□□□ -1.62
SCAF11-212ENST00000549162 MOCS3O95396 460 aa4.92□□□□□ -1.62
SCAF11-212ENST00000549162 MATN4O95460 622 aa4.92□□□□□ -1.62
SCAF11-212ENST00000549162 ECEL1O95672 775 aa4.92□□□□□ -1.62
SCAF11-212ENST00000549162 GLUD1P00367 558 aa4.92□□□□□ -1.62
SCAF11-212ENST00000549162 CNPP09543 421 aaKnown RBP4.92□□□□□ -1.62
SCAF11-212ENST00000549162 VCLP18206 1134 aa4.92□□□□□ -1.62
SCAF11-212ENST00000549162 OXTRP30559 389 aa4.92□□□□□ -1.62
SCAF11-212ENST00000549162 ARSDP51689 593 aa4.92□□□□□ -1.62
SCAF11-212ENST00000549162 STX17P56962 302 aa4.92□□□□□ -1.62
SCAF11-212ENST00000549162 ARF5P84085 180 aa4.92□□□□□ -1.62
SCAF11-212ENST00000549162 GAD2Q05329 585 aa4.92□□□□□ -1.62
SCAF11-212ENST00000549162 ITGA9Q13797 1035 aa4.92□□□□□ -1.62
SCAF11-212ENST00000549162 ZNF460Q14592 562 aa4.92□□□□□ -1.62
SCAF11-212ENST00000549162 PPP6R3Q5H9R7 873 aaPredicted RBP4.92□□□□□ -1.62
SCAF11-212ENST00000549162 MDH1BQ5I0G3 518 aa4.92□□□□□ -1.62
SCAF11-212ENST00000549162 HENMT1Q5T8I9 393 aaKnown RBP4.92□□□□□ -1.62
SCAF11-212ENST00000549162 METTL21CQ5VZV1 264 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms