RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 FUT4P22083 530 aa13.79□□□□□ -0.2
HDAC7-228ENST00000548938 UGT1A1P22309 533 aa13.79□□□□□ -0.2
HDAC7-228ENST00000548938 UGT1A4P22310 534 aa13.79□□□□□ -0.2
HDAC7-228ENST00000548938 DCKP27707 260 aa13.79□□□□□ -0.2
HDAC7-228ENST00000548938 UGT1A3P35503 534 aa13.79□□□□□ -0.2
HDAC7-228ENST00000548938 UGT1A5P35504 534 aa13.79□□□□□ -0.2
HDAC7-228ENST00000548938 MAPK10P53779 464 aa13.79□□□□□ -0.2
HDAC7-228ENST00000548938 ZNF829Q3KNS6 432 aaPredicted RBP13.79□□□□□ -0.2
HDAC7-228ENST00000548938 PCID2Q5JVF3 399 aa13.79□□□□□ -0.2
HDAC7-228ENST00000548938 CHST15Q7LFX5 561 aaPredicted RBP13.79□□□□□ -0.2
HDAC7-228ENST00000548938 CTU1Q7Z7A3 348 aaKnown RBP13.79□□□□□ -0.2
HDAC7-228ENST00000548938 SIX6OS1Q8N1H7 587 aa13.79□□□□□ -0.2
HDAC7-228ENST00000548938 IPMKQ8NFU5 416 aa13.79□□□□□ -0.2
HDAC7-228ENST00000548938 BRI3BPQ8WY22 251 aa13.79□□□□□ -0.2
HDAC7-228ENST00000548938 TANKQ92844 425 aa13.79□□□□□ -0.2
HDAC7-228ENST00000548938 MPHOSPH6Q99547 160 aaKnown RBP13.79□□□□□ -0.2
HDAC7-228ENST00000548938 DOK1Q99704 481 aa13.79□□□□□ -0.2
HDAC7-228ENST00000548938 SOX17Q9H6I2 414 aaPredicted RBP13.79□□□□□ -0.2
HDAC7-228ENST00000548938 MRGBPQ9NV56 204 aa13.79□□□□□ -0.2
HDAC7-228ENST00000548938 MTF2Q9Y483 593 aaPredicted RBP13.79□□□□□ -0.2
HDAC7-228ENST00000548938 RAD54BQ9Y620 910 aa13.79□□□□□ -0.2
HDAC7-228ENST00000548938 A0A087X1B8 175 aa13.78□□□□□ -0.2
HDAC7-228ENST00000548938 CCL15-CCL14A0A0B4J2E2 113 aa13.78□□□□□ -0.2
HDAC7-228ENST00000548938 UBFD1O14562 309 aaKnown RBP13.78□□□□□ -0.2
HDAC7-228ENST00000548938 LGALS2P05162 132 aa13.78□□□□□ -0.2
HDAC7-228ENST00000548938 INHBBP09529 407 aa13.78□□□□□ -0.2
HDAC7-228ENST00000548938 ZNF286BP0CG31 522 aa13.78□□□□□ -0.2
HDAC7-228ENST00000548938 CPB1P15086 417 aa13.78□□□□□ -0.2
HDAC7-228ENST00000548938 CD151P48509 253 aa13.78□□□□□ -0.2
HDAC7-228ENST00000548938 SLC12A2P55011 1212 aa13.78□□□□□ -0.2
HDAC7-228ENST00000548938 C21orf59P57076 290 aa13.78□□□□□ -0.2
HDAC7-228ENST00000548938 RELAQ04206 551 aa13.78□□□□□ -0.2
HDAC7-228ENST00000548938 CCL15Q16663 113 aa13.78□□□□□ -0.2
HDAC7-228ENST00000548938 DCDC5Q6ZRR9 648 aa13.78□□□□□ -0.2
HDAC7-228ENST00000548938 CMTR2Q8IYT2 770 aaKnown RBP13.78□□□□□ -0.2
HDAC7-228ENST00000548938 PNPLA1Q8N8W4 532 aa13.78□□□□□ -0.2
HDAC7-228ENST00000548938 GPRC5AQ8NFJ5 357 aa13.78□□□□□ -0.2
HDAC7-228ENST00000548938 ZNF419Q96HQ0 510 aaPredicted RBP13.78□□□□□ -0.2
HDAC7-228ENST00000548938 C3orf30Q96M34 536 aa13.78□□□□□ -0.2
HDAC7-228ENST00000548938 TRIM8Q9BZR9 551 aa13.78□□□□□ -0.2
HDAC7-228ENST00000548938 EML4Q9HC35 981 aaKnown RBP13.78□□□□□ -0.2
HDAC7-228ENST00000548938 COQ6Q9Y2Z9 468 aa13.78□□□□□ -0.2
HDAC7-228ENST00000548938 DERAQ9Y315 318 aa13.78□□□□□ -0.2
HDAC7-228ENST00000548938 EI24O14681 340 aa13.78□□□□□ -0.2
HDAC7-228ENST00000548938 CLOCKO15516 846 aa13.78□□□□□ -0.2
HDAC7-228ENST00000548938 XPOTO43592 962 aaKnown RBP13.78□□□□□ -0.2
HDAC7-228ENST00000548938 YAP1P46937 504 aaKnown RBP13.78□□□□□ -0.2
HDAC7-228ENST00000548938 TNK2Q07912 1038 aa13.78□□□□□ -0.2
HDAC7-228ENST00000548938 CAPRIN1Q14444 709 aaKnown RBP13.78□□□□□ -0.2
HDAC7-228ENST00000548938 NEDD8Q15843 81 aa13.78□□□□□ -0.2
HDAC7-228ENST00000548938 ATP6AP1Q15904 470 aa13.78□□□□□ -0.2
HDAC7-228ENST00000548938 FAM83EQ2M2I3 478 aa13.78□□□□□ -0.2
HDAC7-228ENST00000548938 ZNF789Q5FWF6 425 aa13.78□□□□□ -0.2
HDAC7-228ENST00000548938 NANOGP8Q6NSW7 305 aa13.78□□□□□ -0.2
HDAC7-228ENST00000548938 OSTM1Q86WC4 334 aa13.78□□□□□ -0.2
HDAC7-228ENST00000548938 B3GALNT2Q8NCR0 500 aa13.78□□□□□ -0.2
HDAC7-228ENST00000548938 ZNF420Q8TAQ5 688 aaPredicted RBP13.78□□□□□ -0.2
HDAC7-228ENST00000548938 DPF3Q92784 378 aa13.78□□□□□ -0.2
HDAC7-228ENST00000548938 OLFM1Q99784 485 aa13.78□□□□□ -0.2
HDAC7-228ENST00000548938 TBL1YQ9BQ87 522 aa13.78□□□□□ -0.2
HDAC7-228ENST00000548938 GPATCH1Q9BRR8 931 aaKnown RBP13.78□□□□□ -0.2
HDAC7-228ENST00000548938 DUSP16Q9BY84 665 aa13.78□□□□□ -0.2
HDAC7-228ENST00000548938 RHOBTB2Q9BYZ6 727 aa13.78□□□□□ -0.2
HDAC7-228ENST00000548938 PLEKHA5Q9HAU0 1116 aa13.78□□□□□ -0.2
HDAC7-228ENST00000548938 GOLGA2P5Q9HBQ8 144 aa13.78□□□□□ -0.2
HDAC7-228ENST00000548938 SELENONQ9NZV5 590 aa13.78□□□□□ -0.2
HDAC7-228ENST00000548938 MAP10Q9P2G4 905 aa13.78□□□□□ -0.2
HDAC7-228ENST00000548938 GIMAP2Q9UG22 337 aa13.78□□□□□ -0.2
HDAC7-228ENST00000548938 TRAF6Q9Y4K3 522 aa13.78□□□□□ -0.2
HDAC7-228ENST00000548938 TSC2P49815 1807 aa13.78□□□□□ -0.2
HDAC7-228ENST00000548938 FUOMA2VDF0 154 aa13.77□□□□□ -0.2
HDAC7-228ENST00000548938 K7EPI3 171 aa13.77□□□□□ -0.2
HDAC7-228ENST00000548938 FUCA1P04066 466 aa13.77□□□□□ -0.2
HDAC7-228ENST00000548938 OCM2P0CE71 109 aa13.77□□□□□ -0.2
HDAC7-228ENST00000548938 OCMP0CE72 109 aaPredicted RBP13.77□□□□□ -0.2
HDAC7-228ENST00000548938 CHRM3P20309 590 aa13.77□□□□□ -0.2
HDAC7-228ENST00000548938 PSMA4P25789 261 aaKnown RBP13.77□□□□□ -0.2
HDAC7-228ENST00000548938 KPNA2P52292 529 aaKnown RBP13.77□□□□□ -0.2
HDAC7-228ENST00000548938 ATP1A4Q13733 1029 aa13.77□□□□□ -0.2
HDAC7-228ENST00000548938 DCAF4L1Q3SXM0 396 aa13.77□□□□□ -0.2
HDAC7-228ENST00000548938 ARHGAP36Q6ZRI8 547 aa13.77□□□□□ -0.2
HDAC7-228ENST00000548938 KCTD8Q6ZWB6 473 aa13.77□□□□□ -0.2
HDAC7-228ENST00000548938 LARP4Q71RC2 724 aaKnown RBP eCLIP13.77□□□□□ -0.2
HDAC7-228ENST00000548938 LINC00523Q86TU6 105 aa13.77□□□□□ -0.2
HDAC7-228ENST00000548938 RSPH1Q8WYR4 309 aa13.77□□□□□ -0.2
HDAC7-228ENST00000548938 SEPT8Q92599 483 aa13.77□□□□□ -0.2
HDAC7-228ENST00000548938 NTAN1Q96AB6 310 aa13.77□□□□□ -0.2
HDAC7-228ENST00000548938 ZUFSPQ96AP4 578 aa13.77□□□□□ -0.2
HDAC7-228ENST00000548938 VAT1Q99536 393 aa13.77□□□□□ -0.2
HDAC7-228ENST00000548938 FICDQ9BVA6 458 aa13.77□□□□□ -0.2
HDAC7-228ENST00000548938 NXF3Q9H4D5 531 aaKnown RBP13.77□□□□□ -0.2
HDAC7-228ENST00000548938 GSTO2Q9H4Y5 243 aa13.77□□□□□ -0.2
HDAC7-228ENST00000548938 RRAGCQ9HB90 399 aa13.77□□□□□ -0.2
HDAC7-228ENST00000548938 YJEFN3A6XGL0 299 aa13.77□□□□□ -0.21
HDAC7-228ENST00000548938 J3QRK9 145 aa13.77□□□□□ -0.21
HDAC7-228ENST00000548938 SERPINB7O75635 380 aa13.77□□□□□ -0.21
HDAC7-228ENST00000548938 NPR3P17342 541 aa13.77□□□□□ -0.21
HDAC7-228ENST00000548938 GPX3P22352 226 aa13.77□□□□□ -0.21
HDAC7-228ENST00000548938 AKAP5P24588 427 aa13.77□□□□□ -0.21
HDAC7-228ENST00000548938 FASP25445 335 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms