RNA–Protein interactions for RNA: ENST00000548283.6

TMEM116-206, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 3,640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-206ENST00000548283 A0A1W2PPH5 198 aa7.3□□□□□ -1.24
TMEM116-206ENST00000548283 C3orf80F5H4A9 247 aa7.3□□□□□ -1.24
TMEM116-206ENST00000548283 MOSPD3O75425 235 aa7.3□□□□□ -1.24
TMEM116-206ENST00000548283 SNX4O95219 450 aa7.3□□□□□ -1.24
TMEM116-206ENST00000548283 ZSCAN5DPP0CG00 497 aa7.3□□□□□ -1.24
TMEM116-206ENST00000548283 CSF2RAP15509 400 aa7.3□□□□□ -1.24
TMEM116-206ENST00000548283 DPP6P42658 865 aa7.3□□□□□ -1.24
TMEM116-206ENST00000548283 PRIM2P49643 509 aa7.3□□□□□ -1.24
TMEM116-206ENST00000548283 TIGD7Q6NT04 549 aaPredicted RBP7.3□□□□□ -1.24
TMEM116-206ENST00000548283 MARK2Q7KZI7 788 aaKnown RBP7.3□□□□□ -1.24
TMEM116-206ENST00000548283 SETD3Q86TU7 594 aaPredicted RBP7.3□□□□□ -1.24
TMEM116-206ENST00000548283 EPHX4Q8IUS5 362 aa7.3□□□□□ -1.24
TMEM116-206ENST00000548283 NKAPQ8N5F7 415 aaKnown RBP7.3□□□□□ -1.24
TMEM116-206ENST00000548283 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.3□□□□□ -1.24
TMEM116-206ENST00000548283 LEMD2Q8NC56 503 aa7.3□□□□□ -1.24
TMEM116-206ENST00000548283 CCDC197Q8NCU1 140 aa7.3□□□□□ -1.24
TMEM116-206ENST00000548283 OR6Y1Q8NGX8 325 aa7.3□□□□□ -1.24
TMEM116-206ENST00000548283 DTX3LQ8TDB6 740 aa7.3□□□□□ -1.24
TMEM116-206ENST00000548283 BRSK1Q8TDC3 778 aa7.3□□□□□ -1.24
TMEM116-206ENST00000548283 FAM193BQ96PV7 902 aaPredicted RBP7.3□□□□□ -1.24
TMEM116-206ENST00000548283 TRIB3Q96RU7 358 aa7.3□□□□□ -1.24
TMEM116-206ENST00000548283 RAD9AQ99638 391 aa7.3□□□□□ -1.24
TMEM116-206ENST00000548283 NAT9Q9BTE0 207 aa7.3□□□□□ -1.24
TMEM116-206ENST00000548283 KIFC1Q9BW19 673 aa7.3□□□□□ -1.24
TMEM116-206ENST00000548283 CATSPERBQ9H7T0 1116 aa7.3□□□□□ -1.24
TMEM116-206ENST00000548283 TRPV4Q9HBA0 871 aa7.3□□□□□ -1.24
TMEM116-206ENST00000548283 NOP53Q9NZM5 478 aaKnown RBP7.3□□□□□ -1.24
TMEM116-206ENST00000548283 GMIPQ9P107 970 aa7.3□□□□□ -1.24
TMEM116-206ENST00000548283 UNC5CO95185 931 aa7.29□□□□□ -1.24
TMEM116-206ENST00000548283 PAPSS2O95340 614 aaPredicted RBP7.29□□□□□ -1.24
TMEM116-206ENST00000548283 ARL4AP40617 200 aa7.29□□□□□ -1.24
TMEM116-206ENST00000548283 HTR3AP46098 478 aa7.29□□□□□ -1.24
TMEM116-206ENST00000548283 SCNN1BP51168 640 aa7.29□□□□□ -1.24
TMEM116-206ENST00000548283 LIMK1P53667 647 aa7.29□□□□□ -1.24
TMEM116-206ENST00000548283 PLTPP55058 493 aa7.29□□□□□ -1.24
TMEM116-206ENST00000548283 ATP11AP98196 1134 aa7.29□□□□□ -1.24
TMEM116-206ENST00000548283 CDK18Q07002 472 aa7.29□□□□□ -1.24
TMEM116-206ENST00000548283 USP4Q13107 963 aa7.29□□□□□ -1.24
TMEM116-206ENST00000548283 CALCOCO2Q13137 446 aa7.29□□□□□ -1.24
TMEM116-206ENST00000548283 SGCGQ13326 291 aa7.29□□□□□ -1.24
TMEM116-206ENST00000548283 TDGQ13569 410 aa7.29□□□□□ -1.24
TMEM116-206ENST00000548283 KRT81Q14533 505 aa7.29□□□□□ -1.24
TMEM116-206ENST00000548283 SLC44A1Q8WWI5 657 aa7.29□□□□□ -1.24
TMEM116-206ENST00000548283 HDAC2Q92769 488 aaKnown RBP7.29□□□□□ -1.24
TMEM116-206ENST00000548283 IMP4Q96G21 291 aaKnown RBP7.29□□□□□ -1.24
TMEM116-206ENST00000548283 KLHL5Q96PQ7 755 aa7.29□□□□□ -1.24
TMEM116-206ENST00000548283 LMAN2LQ9H0V9 348 aa7.29□□□□□ -1.24
TMEM116-206ENST00000548283 SYNDIG1Q9H7V2 258 aa7.29□□□□□ -1.24
TMEM116-206ENST00000548283 VPS37BQ9H9H4 285 aa7.29□□□□□ -1.24
TMEM116-206ENST00000548283 RNPEPL1Q9HAU8 725 aa7.29□□□□□ -1.24
TMEM116-206ENST00000548283 TMPRSS4Q9NRS4 437 aa7.29□□□□□ -1.24
TMEM116-206ENST00000548283 ACTR10Q9NZ32 417 aa7.29□□□□□ -1.24
TMEM116-206ENST00000548283 MARK1Q9P0L2 795 aa7.29□□□□□ -1.24
TMEM116-206ENST00000548283 SENP1Q9P0U3 644 aa7.29□□□□□ -1.24
TMEM116-206ENST00000548283 SAE1Q9UBE0 346 aaPredicted RBP7.29□□□□□ -1.24
TMEM116-206ENST00000548283 ZNF510Q9Y2H8 683 aa7.29□□□□□ -1.24
TMEM116-206ENST00000548283 MAGEB16A2A368 324 aa7.29□□□□□ -1.24
TMEM116-206ENST00000548283 C2orf71A6NGG8 1288 aa7.29□□□□□ -1.24
TMEM116-206ENST00000548283 MROH6A6NGR9 719 aa7.29□□□□□ -1.24
TMEM116-206ENST00000548283 NUDT19A8MXV4 375 aa7.29□□□□□ -1.24
TMEM116-206ENST00000548283 FAM25EA8MYX2 175 aa7.29□□□□□ -1.24
TMEM116-206ENST00000548283 TPP1O14773 563 aa7.29□□□□□ -1.24
TMEM116-206ENST00000548283 ZMPSTE24O75844 475 aa7.29□□□□□ -1.24
TMEM116-206ENST00000548283 EPOP01588 193 aa7.29□□□□□ -1.24
TMEM116-206ENST00000548283 ACADSP16219 412 aa7.29□□□□□ -1.24
TMEM116-206ENST00000548283 CD9P21926 228 aa7.29□□□□□ -1.24
TMEM116-206ENST00000548283 AMPD1P23109 780 aa7.29□□□□□ -1.24
TMEM116-206ENST00000548283 BMP8BP34820 402 aa7.29□□□□□ -1.24
TMEM116-206ENST00000548283 GRIK1P39086 918 aa7.29□□□□□ -1.24
TMEM116-206ENST00000548283 WDR4P57081 412 aaKnown RBP7.29□□□□□ -1.24
TMEM116-206ENST00000548283 FPGSQ05932 587 aa7.29□□□□□ -1.24
TMEM116-206ENST00000548283 IL10RBQ08334 325 aa7.29□□□□□ -1.24
TMEM116-206ENST00000548283 DNAJC3Q13217 504 aa7.29□□□□□ -1.24
TMEM116-206ENST00000548283 HNRNPDQ14103 355 aaKnown RBP7.29□□□□□ -1.24
TMEM116-206ENST00000548283 CCDC85BQ15834 202 aaPredicted RBP7.29□□□□□ -1.24
TMEM116-206ENST00000548283 MINDY4Q4G0A6 757 aa7.29□□□□□ -1.24
TMEM116-206ENST00000548283 NUP54Q7Z3B4 507 aa7.29□□□□□ -1.24
TMEM116-206ENST00000548283 IGDCC3Q8IVU1 814 aa7.29□□□□□ -1.24
TMEM116-206ENST00000548283 HERC6Q8IVU3 1022 aa7.29□□□□□ -1.24
TMEM116-206ENST00000548283 CBARPQ8N350 705 aaPredicted RBP7.29□□□□□ -1.24
TMEM116-206ENST00000548283 GOLM1Q8NBJ4 401 aa7.29□□□□□ -1.24
TMEM116-206ENST00000548283 PRICKLE1Q96MT3 831 aaPredicted RBP7.29□□□□□ -1.24
TMEM116-206ENST00000548283 RBM15Q96T37 977 aaKnown RBP eCLIP7.29□□□□□ -1.24
TMEM116-206ENST00000548283 CCDC68Q9H2F9 335 aa7.29□□□□□ -1.24
TMEM116-206ENST00000548283 ETNK1Q9HBU6 452 aa7.29□□□□□ -1.24
TMEM116-206ENST00000548283 TREX1Q9NSU2 369 aa7.29□□□□□ -1.24
TMEM116-206ENST00000548283 SPATS2LQ9NUQ6 558 aaKnown RBP7.29□□□□□ -1.24
TMEM116-206ENST00000548283 FGFR1OP2Q9NVK5 253 aa7.29□□□□□ -1.24
TMEM116-206ENST00000548283 GRHPRQ9UBQ7 328 aa7.29□□□□□ -1.24
TMEM116-206ENST00000548283 YIPF1Q9Y548 306 aa7.29□□□□□ -1.24
TMEM116-206ENST00000548283 INSL5Q9Y5Q6 135 aa7.29□□□□□ -1.24
TMEM116-206ENST00000548283 CD160O95971 181 aa7.29□□□□□ -1.24
TMEM116-206ENST00000548283 HNRNPA1P09651 372 aaKnown RBP eCLIP7.29□□□□□ -1.24
TMEM116-206ENST00000548283 OR4Q2P0C623 313 aa7.29□□□□□ -1.24
TMEM116-206ENST00000548283 CES1P23141 567 aa7.29□□□□□ -1.24
TMEM116-206ENST00000548283 ALDH7A1P49419 539 aaKnown RBP7.29□□□□□ -1.24
TMEM116-206ENST00000548283 ARL4CP56559 192 aa7.29□□□□□ -1.24
TMEM116-206ENST00000548283 ERVK-21P61565 698 aa7.29□□□□□ -1.24
TMEM116-206ENST00000548283 COG7P83436 770 aa7.29□□□□□ -1.24
TMEM116-206ENST00000548283 GPS1Q13098 491 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms