RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 METTL3Q86U44 580 aaKnown RBP17.52■□□□□ 0.4
HDAC7-227ENST00000548080 DCLK2Q8N568 766 aa17.52■□□□□ 0.4
HDAC7-227ENST00000548080 OR2AP1Q8NGE2 309 aa17.52■□□□□ 0.4
HDAC7-227ENST00000548080 OMDQ99983 421 aa17.52■□□□□ 0.4
HDAC7-227ENST00000548080 MLPHQ9BV36 600 aaPredicted RBP17.52■□□□□ 0.4
HDAC7-227ENST00000548080 SLC25A51Q9H1U9 297 aa17.52■□□□□ 0.4
HDAC7-227ENST00000548080 WSB2Q9NYS7 404 aaPredicted RBP17.52■□□□□ 0.4
HDAC7-227ENST00000548080 NINJ2Q9NZG7 142 aa17.52■□□□□ 0.4
HDAC7-227ENST00000548080 IL36AQ9UHA7 158 aa17.52■□□□□ 0.4
HDAC7-227ENST00000548080 PPM1HQ9ULR3 514 aa17.52■□□□□ 0.4
HDAC7-227ENST00000548080 PLAAQ9Y263 795 aa17.52■□□□□ 0.4
HDAC7-227ENST00000548080 AAR2Q9Y312 384 aaKnown RBP17.52■□□□□ 0.4
HDAC7-227ENST00000548080 TTLL3Q9Y4R7 772 aa17.52■□□□□ 0.4
HDAC7-227ENST00000548080 ATXN2Q99700 1313 aaKnown RBP17.52■□□□□ 0.39
HDAC7-227ENST00000548080 FAM47DPA6NHR8 397 aa17.51■□□□□ 0.39
HDAC7-227ENST00000548080 MUSKO15146 869 aa17.51■□□□□ 0.39
HDAC7-227ENST00000548080 NDUFS2O75306 463 aa17.51■□□□□ 0.39
HDAC7-227ENST00000548080 ANXA9O76027 345 aa17.51■□□□□ 0.39
HDAC7-227ENST00000548080 SUN1O94901 812 aa17.51■□□□□ 0.39
HDAC7-227ENST00000548080 ADH1BP00325 375 aa17.51■□□□□ 0.39
HDAC7-227ENST00000548080 MLNP12872 115 aa17.51■□□□□ 0.39
HDAC7-227ENST00000548080 PLA2G5P39877 138 aa17.51■□□□□ 0.39
HDAC7-227ENST00000548080 PTGER3P43115 390 aa17.51■□□□□ 0.39
HDAC7-227ENST00000548080 CNTN1Q12860 1018 aa17.51■□□□□ 0.39
HDAC7-227ENST00000548080 SLC29A2Q14542 456 aa17.51■□□□□ 0.39
HDAC7-227ENST00000548080 INO80DQ53TQ3 878 aaPredicted RBP17.51■□□□□ 0.39
HDAC7-227ENST00000548080 DENND2CQ68D51 928 aa17.51■□□□□ 0.39
HDAC7-227ENST00000548080 LRRC8BQ6P9F7 803 aa17.51■□□□□ 0.39
HDAC7-227ENST00000548080 LRIG3Q6UXM1 1119 aa17.51■□□□□ 0.39
HDAC7-227ENST00000548080 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.51■□□□□ 0.39
HDAC7-227ENST00000548080 ZNF534Q76KX8 674 aa17.51■□□□□ 0.39
HDAC7-227ENST00000548080 DSG4Q86SJ6 1040 aa17.51■□□□□ 0.39
HDAC7-227ENST00000548080 ZBED8Q8IZ13 594 aa17.51■□□□□ 0.39
HDAC7-227ENST00000548080 BBS5Q8N3I7 341 aa17.51■□□□□ 0.39
HDAC7-227ENST00000548080 ISG20Q96AZ6 181 aaKnown RBP17.51■□□□□ 0.39
HDAC7-227ENST00000548080 OXNAD1Q96HP4 312 aaPredicted RBP17.51■□□□□ 0.39
HDAC7-227ENST00000548080 C9orf72Q96LT7 481 aa17.51■□□□□ 0.39
HDAC7-227ENST00000548080 TTC25Q96NG3 672 aa17.51■□□□□ 0.39
HDAC7-227ENST00000548080 ZIM3Q96PE6 472 aa17.51■□□□□ 0.39
HDAC7-227ENST00000548080 HEPHQ9BQS7 1158 aa17.51■□□□□ 0.39
HDAC7-227ENST00000548080 SMOC1Q9H4F8 434 aa17.51■□□□□ 0.39
HDAC7-227ENST00000548080 LRRC40Q9H9A6 602 aa17.51■□□□□ 0.39
HDAC7-227ENST00000548080 HAUS2Q9NVX0 235 aa17.51■□□□□ 0.39
HDAC7-227ENST00000548080 OTOGLQ3ZCN5 2332 aa17.51■□□□□ 0.39
HDAC7-227ENST00000548080 EP300Q09472 2414 aaPredicted RBP17.51■□□□□ 0.39
HDAC7-227ENST00000548080 C1QTNF3-AMACRE9PGA6 284 aa17.5■□□□□ 0.39
HDAC7-227ENST00000548080 AVILO75366 819 aa17.5■□□□□ 0.39
HDAC7-227ENST00000548080 BANF1O75531 89 aa17.5■□□□□ 0.39
HDAC7-227ENST00000548080 PIGNO95427 931 aa17.5■□□□□ 0.39
HDAC7-227ENST00000548080 IGSF6O95976 241 aa17.5■□□□□ 0.39
HDAC7-227ENST00000548080 GSRP00390 522 aa17.5■□□□□ 0.39
HDAC7-227ENST00000548080 MAGEA3P43357 314 aa17.5■□□□□ 0.39
HDAC7-227ENST00000548080 GEMP55040 296 aa17.5■□□□□ 0.39
HDAC7-227ENST00000548080 SNRPD1P62314 119 aaKnown RBP17.5■□□□□ 0.39
HDAC7-227ENST00000548080 FAM193AP78312 1265 aa17.5■□□□□ 0.39
HDAC7-227ENST00000548080 ZBTB16Q05516 673 aa17.5■□□□□ 0.39
HDAC7-227ENST00000548080 ITKQ08881 620 aa17.5■□□□□ 0.39
HDAC7-227ENST00000548080 SPARCL1Q14515 664 aa17.5■□□□□ 0.39
HDAC7-227ENST00000548080 ZNF235Q14590 738 aa17.5■□□□□ 0.39
HDAC7-227ENST00000548080 FASTKD3Q14CZ7 662 aaKnown RBP17.5■□□□□ 0.39
HDAC7-227ENST00000548080 MYLK3Q32MK0 819 aa17.5■□□□□ 0.39
HDAC7-227ENST00000548080 HP1BP3Q5SSJ5 553 aaPredicted RBP17.5■□□□□ 0.39
HDAC7-227ENST00000548080 LPCAT2Q7L5N7 544 aa17.5■□□□□ 0.39
HDAC7-227ENST00000548080 SLC41A1Q8IVJ1 513 aa17.5■□□□□ 0.39
HDAC7-227ENST00000548080 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.5■□□□□ 0.39
HDAC7-227ENST00000548080 HSPA12BQ96MM6 686 aa17.5■□□□□ 0.39
HDAC7-227ENST00000548080 CINPQ9BW66 212 aaPredicted RBP17.5■□□□□ 0.39
HDAC7-227ENST00000548080 C6orf106Q9H6K1 298 aaPredicted RBP17.5■□□□□ 0.39
HDAC7-227ENST00000548080 UBP1Q9NZI7 540 aa17.5■□□□□ 0.39
HDAC7-227ENST00000548080 SEPT3Q9UH03 358 aa17.5■□□□□ 0.39
HDAC7-227ENST00000548080 NCKAP1Q9Y2A7 1128 aa17.5■□□□□ 0.39
HDAC7-227ENST00000548080 NFS1Q9Y697 457 aa17.5■□□□□ 0.39
HDAC7-227ENST00000548080 RALGAPA1Q6GYQ0 2036 aa17.5■□□□□ 0.39
HDAC7-227ENST00000548080 ANKRD36A6QL64 1941 aa17.5■□□□□ 0.39
HDAC7-227ENST00000548080 TNRC6BQ9UPQ9 1833 aaKnown RBP17.5■□□□□ 0.39
HDAC7-227ENST00000548080 RIF1Q5UIP0 2472 aaKnown RBP17.5■□□□□ 0.39
HDAC7-227ENST00000548080 GFRA3O60609 400 aa17.5■□□□□ 0.39
HDAC7-227ENST00000548080 UGT2B4P06133 528 aa17.5■□□□□ 0.39
HDAC7-227ENST00000548080 NUDT17P0C025 328 aa17.5■□□□□ 0.39
HDAC7-227ENST00000548080 C5AR1P21730 350 aa17.5■□□□□ 0.39
HDAC7-227ENST00000548080 GRIA1P42261 906 aa17.5■□□□□ 0.39
HDAC7-227ENST00000548080 CCDC38Q502W7 563 aa17.5■□□□□ 0.39
HDAC7-227ENST00000548080 LAIR1Q6GTX8 287 aa17.5■□□□□ 0.39
HDAC7-227ENST00000548080 SLC36A4Q6YBV0 504 aa17.5■□□□□ 0.39
HDAC7-227ENST00000548080 ALYREFQ86V81 257 aaKnown RBP17.5■□□□□ 0.39
HDAC7-227ENST00000548080 ANKMY2Q8IV38 441 aa17.5■□□□□ 0.39
HDAC7-227ENST00000548080 PGBD5Q8N414 524 aa17.5■□□□□ 0.39
HDAC7-227ENST00000548080 FBXO36Q8NEA4 188 aa17.5■□□□□ 0.39
HDAC7-227ENST00000548080 SPATA22Q8NHS9 363 aa17.5■□□□□ 0.39
HDAC7-227ENST00000548080 PYROXD1Q8WU10 500 aa17.5■□□□□ 0.39
HDAC7-227ENST00000548080 VOPP1Q96AW1 172 aa17.5■□□□□ 0.39
HDAC7-227ENST00000548080 LRRC39Q96DD0 335 aa17.5■□□□□ 0.39
HDAC7-227ENST00000548080 IMP4Q96G21 291 aaKnown RBP17.5■□□□□ 0.39
HDAC7-227ENST00000548080 ZC3H10Q96K80 434 aaKnown RBP17.5■□□□□ 0.39
HDAC7-227ENST00000548080 RUFY1Q96T51 708 aa17.5■□□□□ 0.39
HDAC7-227ENST00000548080 ARRDC1-AS1Q9H2J1 176 aa17.5■□□□□ 0.39
HDAC7-227ENST00000548080 NCDNQ9UBB6 729 aa17.5■□□□□ 0.39
HDAC7-227ENST00000548080 CXorf51AA0A1B0GTR3 108 aa17.49■□□□□ 0.39
HDAC7-227ENST00000548080 AGPSO00116 658 aa17.49■□□□□ 0.39
HDAC7-227ENST00000548080 RHOBTB1O94844 696 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms