RNA–Protein interactions for RNA: ENST00000547862.6

SSH1-207, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-207ENST00000547862 RBM43Q6ZSC3 357 aaKnown RBP20.49■□□□□ 0.87
SSH1-207ENST00000547862 SRLQ86TD4 932 aa20.49■□□□□ 0.87
SSH1-207ENST00000547862 AOPEPQ8N6M6 819 aa20.49■□□□□ 0.87
SSH1-207ENST00000547862 Q8N9G6 341 aaPredicted RBP20.49■□□□□ 0.87
SSH1-207ENST00000547862 ATL2Q8NHH9 583 aa20.49■□□□□ 0.87
SSH1-207ENST00000547862 GRAMD1AQ96CP6 724 aa20.49■□□□□ 0.87
SSH1-207ENST00000547862 MRPL40Q9NQ50 206 aaKnown RBP20.49■□□□□ 0.87
SSH1-207ENST00000547862 HELZ2Q9BYK8 2649 aaKnown RBP20.49■□□□□ 0.87
SSH1-207ENST00000547862 CDRT15L2A8MXV6 281 aa20.48■□□□□ 0.87
SSH1-207ENST00000547862 TNFP01375 233 aa20.48■□□□□ 0.87
SSH1-207ENST00000547862 RALGDSQ12967 914 aa20.48■□□□□ 0.87
SSH1-207ENST00000547862 MTM1Q13496 603 aa20.48■□□□□ 0.87
SSH1-207ENST00000547862 NPWQ8N729 165 aa20.48■□□□□ 0.87
SSH1-207ENST00000547862 OR1E3Q8WZA6 343 aa20.48■□□□□ 0.87
SSH1-207ENST00000547862 ZNF641Q96N77 438 aaPredicted RBP20.48■□□□□ 0.87
SSH1-207ENST00000547862 TUBGCP5Q96RT8 1024 aa20.48■□□□□ 0.87
SSH1-207ENST00000547862 TRIM7Q9C029 511 aa20.48■□□□□ 0.87
SSH1-207ENST00000547862 SEMA4CQ9C0C4 833 aa20.48■□□□□ 0.87
SSH1-207ENST00000547862 FGF22Q9HCT0 170 aa20.48■□□□□ 0.87
SSH1-207ENST00000547862 UNC13CQ8NB66 2214 aa20.47■□□□□ 0.87
SSH1-207ENST00000547862 CACNB4O00305 520 aaPredicted RBP20.47■□□□□ 0.87
SSH1-207ENST00000547862 NTN3O00634 580 aaPredicted RBP20.47■□□□□ 0.87
SSH1-207ENST00000547862 RECQL5O94762 991 aaPredicted RBP20.47■□□□□ 0.87
SSH1-207ENST00000547862 CCDC172P0C7W6 258 aa20.47■□□□□ 0.87
SSH1-207ENST00000547862 ATP1A3P13637 1013 aa20.47■□□□□ 0.87
SSH1-207ENST00000547862 KRT10P13645 584 aa20.47■□□□□ 0.87
SSH1-207ENST00000547862 HTR7P34969 479 aa20.47■□□□□ 0.87
SSH1-207ENST00000547862 INHBCP55103 352 aa20.47■□□□□ 0.87
SSH1-207ENST00000547862 BCL2L1Q07817 233 aa20.47■□□□□ 0.87
SSH1-207ENST00000547862 CLN3Q13286 438 aa20.47■□□□□ 0.87
SSH1-207ENST00000547862 MAMLD1Q13495 774 aa20.47■□□□□ 0.87
SSH1-207ENST00000547862 RFX8Q6ZV50 586 aa20.47■□□□□ 0.87
SSH1-207ENST00000547862 TAF8Q7Z7C8 310 aa20.47■□□□□ 0.87
SSH1-207ENST00000547862 SFTPA2Q8IWL1 248 aa20.47■□□□□ 0.87
SSH1-207ENST00000547862 FBXO39Q8N4B4 442 aa20.47■□□□□ 0.87
SSH1-207ENST00000547862 CCDC97Q96F63 343 aaPredicted RBP20.47■□□□□ 0.87
SSH1-207ENST00000547862 LIN37Q96GY3 246 aaPredicted RBP20.47■□□□□ 0.87
SSH1-207ENST00000547862 DONSONQ9NYP3 566 aa20.47■□□□□ 0.87
SSH1-207ENST00000547862 ATXN7L1Q9ULK2 861 aaPredicted RBP20.47■□□□□ 0.87
SSH1-207ENST00000547862 ARHGEF17Q96PE2 2063 aaPredicted RBP20.46■□□□□ 0.87
SSH1-207ENST00000547862 TTC24A2A3L6 582 aaPredicted RBP20.46■□□□□ 0.87
SSH1-207ENST00000547862 TMEM202A6NGA9 273 aa20.46■□□□□ 0.87
SSH1-207ENST00000547862 PLD2O14939 933 aa20.46■□□□□ 0.87
SSH1-207ENST00000547862 TEX33O43247 280 aa20.46■□□□□ 0.87
SSH1-207ENST00000547862 ITGA2BP08514 1039 aa20.46■□□□□ 0.87
SSH1-207ENST00000547862 ERCC2P18074 760 aa20.46■□□□□ 0.87
SSH1-207ENST00000547862 SCNN1BP51168 640 aa20.46■□□□□ 0.87
SSH1-207ENST00000547862 ACOX1Q15067 660 aa20.46■□□□□ 0.87
SSH1-207ENST00000547862 ASIC2Q16515 512 aa20.46■□□□□ 0.87
SSH1-207ENST00000547862 ERMARDQ5T6L9 678 aa20.46■□□□□ 0.87
SSH1-207ENST00000547862 DENND2CQ68D51 928 aa20.46■□□□□ 0.87
SSH1-207ENST00000547862 LVRNQ6Q4G3 990 aa20.46■□□□□ 0.87
SSH1-207ENST00000547862 CCDC81Q6ZN84 652 aa20.46■□□□□ 0.87
SSH1-207ENST00000547862 RAB11FIP2Q7L804 512 aa20.46■□□□□ 0.87
SSH1-207ENST00000547862 APTXQ7Z2E3 356 aaKnown RBP20.46■□□□□ 0.87
SSH1-207ENST00000547862 CLEC14AQ86T13 490 aa20.46■□□□□ 0.87
SSH1-207ENST00000547862 CCNJLQ8IV13 435 aa20.46■□□□□ 0.87
SSH1-207ENST00000547862 ARHGAP12Q8IWW6 846 aa20.46■□□□□ 0.87
SSH1-207ENST00000547862 OR56A4Q8NGH8 313 aa20.46■□□□□ 0.87
SSH1-207ENST00000547862 HCAR2Q8TDS4 363 aa20.46■□□□□ 0.87
SSH1-207ENST00000547862 PDCD6IPQ8WUM4 868 aaKnown RBP20.46■□□□□ 0.87
SSH1-207ENST00000547862 FUBP1Q96AE4 644 aaKnown RBP20.46■□□□□ 0.87
SSH1-207ENST00000547862 STRADBQ9C0K7 418 aa20.46■□□□□ 0.87
SSH1-207ENST00000547862 LRRN3Q9H3W5 708 aa20.46■□□□□ 0.87
SSH1-207ENST00000547862 PARVAQ9NVD7 372 aa20.46■□□□□ 0.87
SSH1-207ENST00000547862 PISDQ9UG56 409 aa20.46■□□□□ 0.87
SSH1-207ENST00000547862 CFAP46Q8IYW2 2715 aa20.46■□□□□ 0.87
SSH1-207ENST00000547862 ZNF462Q96JM2 2506 aa20.46■□□□□ 0.87
SSH1-207ENST00000547862 A0A1W2PQM1 296 aa20.45■□□□□ 0.86
SSH1-207ENST00000547862 LRRC53A6NM62 1247 aa20.45■□□□□ 0.86
SSH1-207ENST00000547862 PRPSAP2O60256 369 aa20.45■□□□□ 0.86
SSH1-207ENST00000547862 UGT1A5P35504 534 aa20.45■□□□□ 0.86
SSH1-207ENST00000547862 KIAA1024LP59773 190 aa20.45■□□□□ 0.86
SSH1-207ENST00000547862 SKOR1P84550 965 aa20.45■□□□□ 0.86
SSH1-207ENST00000547862 NCAPHQ15003 741 aa20.45■□□□□ 0.86
SSH1-207ENST00000547862 LIPIQ6XZB0 460 aa20.45■□□□□ 0.86
SSH1-207ENST00000547862 TP53INP2Q8IXH6 220 aa20.45■□□□□ 0.86
SSH1-207ENST00000547862 ARFGAP1Q8N6T3 406 aa20.45■□□□□ 0.86
SSH1-207ENST00000547862 FAM46DQ8NEK8 389 aa20.45■□□□□ 0.86
SSH1-207ENST00000547862 ZNF653Q96CK0 615 aa20.45■□□□□ 0.86
SSH1-207ENST00000547862 RBM15Q96T37 977 aaKnown RBP eCLIP20.45■□□□□ 0.86
SSH1-207ENST00000547862 HSD3B7Q9H2F3 369 aa20.45■□□□□ 0.86
SSH1-207ENST00000547862 CYP4F12Q9HCS2 524 aa20.45■□□□□ 0.86
SSH1-207ENST00000547862 GOLGA6CA6NDK9 693 aa20.44■□□□□ 0.86
SSH1-207ENST00000547862 GOLGA6BA6NDN3 693 aa20.44■□□□□ 0.86
SSH1-207ENST00000547862 PYCARD-AS1I3L0S3 204 aa20.44■□□□□ 0.86
SSH1-207ENST00000547862 K7ENP7 123 aa20.44■□□□□ 0.86
SSH1-207ENST00000547862 RNF8O76064 485 aa20.44■□□□□ 0.86
SSH1-207ENST00000547862 JMJD7P0C870 316 aa20.44■□□□□ 0.86
SSH1-207ENST00000547862 GOLGA6DP0CG33 693 aa20.44■□□□□ 0.86
SSH1-207ENST00000547862 MIPP30301 263 aa20.44■□□□□ 0.86
SSH1-207ENST00000547862 SLC5A2P31639 672 aa20.44■□□□□ 0.86
SSH1-207ENST00000547862 INO80CQ6PI98 192 aaPredicted RBP20.44■□□□□ 0.86
SSH1-207ENST00000547862 DPPA4Q7L190 304 aa20.44■□□□□ 0.86
SSH1-207ENST00000547862 PELI3Q8N2H9 469 aa20.44■□□□□ 0.86
SSH1-207ENST00000547862 CCL4L1Q8NHW4 92 aa20.44■□□□□ 0.86
SSH1-207ENST00000547862 TTC9Q92623 222 aa20.44■□□□□ 0.86
SSH1-207ENST00000547862 GBP4Q96PP9 640 aa20.44■□□□□ 0.86
SSH1-207ENST00000547862 TMEM168Q9H0V1 697 aa20.44■□□□□ 0.86
SSH1-207ENST00000547862 WDR26Q9H7D7 661 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms