RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 PELI3Q8N2H9 469 aa6.52□□□□□ -1.37
SNHG1-225ENST00000545920 CCDC185Q8N715 623 aa6.52□□□□□ -1.37
SNHG1-225ENST00000545920 C12orf29Q8N999 325 aa6.52□□□□□ -1.37
SNHG1-225ENST00000545920 PPHLN1Q8NEY8 458 aaKnown RBP6.52□□□□□ -1.37
SNHG1-225ENST00000545920 BHLHE22Q8NFJ8 381 aaPredicted RBP6.52□□□□□ -1.37
SNHG1-225ENST00000545920 TSPAN14Q8NG11 270 aa6.52□□□□□ -1.37
SNHG1-225ENST00000545920 PEX13Q92968 403 aa6.52□□□□□ -1.37
SNHG1-225ENST00000545920 EME1Q96AY2 570 aa6.52□□□□□ -1.37
SNHG1-225ENST00000545920 SGF29Q96ES7 293 aa6.52□□□□□ -1.37
SNHG1-225ENST00000545920 SLC45A3Q96JT2 553 aa6.52□□□□□ -1.37
SNHG1-225ENST00000545920 RHOVQ96L33 236 aa6.52□□□□□ -1.37
SNHG1-225ENST00000545920 FCRL3Q96P31 734 aaPredicted RBP6.52□□□□□ -1.37
SNHG1-225ENST00000545920 OR52B2Q96RD2 323 aa6.52□□□□□ -1.37
SNHG1-225ENST00000545920 FCRL5Q96RD9 977 aa6.52□□□□□ -1.37
SNHG1-225ENST00000545920 RANBP9Q96S59 729 aa6.52□□□□□ -1.37
SNHG1-225ENST00000545920 LGMNQ99538 433 aa6.52□□□□□ -1.37
SNHG1-225ENST00000545920 MRPL45Q9BRJ2 306 aaKnown RBP6.52□□□□□ -1.37
SNHG1-225ENST00000545920 OXCT2Q9BYC2 517 aaPredicted RBP6.52□□□□□ -1.37
SNHG1-225ENST00000545920 RNPEPQ9H4A4 650 aa6.52□□□□□ -1.37
SNHG1-225ENST00000545920 CLK4Q9HAZ1 481 aaKnown RBP6.52□□□□□ -1.37
SNHG1-225ENST00000545920 MAGEE1Q9HCI5 957 aa6.52□□□□□ -1.37
SNHG1-225ENST00000545920 FBXW11Q9UKB1 542 aa6.52□□□□□ -1.37
SNHG1-225ENST00000545920 CDH7Q9ULB5 785 aa6.52□□□□□ -1.37
SNHG1-225ENST00000545920 NDUFAF1Q9Y375 327 aa6.52□□□□□ -1.37
SNHG1-225ENST00000545920 BRWD3Q6RI45 1802 aa6.52□□□□□ -1.37
SNHG1-225ENST00000545920 LRRC37A2A6NM11 1700 aa6.51□□□□□ -1.37
SNHG1-225ENST00000545920 LCTP09848 1927 aa6.51□□□□□ -1.37
SNHG1-225ENST00000545920 ARHGEF37A1IGU5 675 aa6.51□□□□□ -1.37
SNHG1-225ENST00000545920 CDC14CA4D256 554 aa6.51□□□□□ -1.37
SNHG1-225ENST00000545920 TCAF2A6NFQ2 919 aa6.51□□□□□ -1.37
SNHG1-225ENST00000545920 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.51□□□□□ -1.37
SNHG1-225ENST00000545920 H3BNH8 94 aa6.51□□□□□ -1.37
SNHG1-225ENST00000545920 TRIM24O15164 1050 aa6.51□□□□□ -1.37
SNHG1-225ENST00000545920 UBDO15205 165 aa6.51□□□□□ -1.37
SNHG1-225ENST00000545920 ATXN7O15265 892 aaPredicted RBP6.51□□□□□ -1.37
SNHG1-225ENST00000545920 GREM1O60565 184 aa6.51□□□□□ -1.37
SNHG1-225ENST00000545920 CBFA2T3O75081 653 aa6.51□□□□□ -1.37
SNHG1-225ENST00000545920 SRP72O76094 671 aaKnown RBP6.51□□□□□ -1.37
SNHG1-225ENST00000545920 VAPBO95292 243 aa6.51□□□□□ -1.37
SNHG1-225ENST00000545920 ARIH2O95376 493 aa6.51□□□□□ -1.37
SNHG1-225ENST00000545920 NPPAP01160 153 aa6.51□□□□□ -1.37
SNHG1-225ENST00000545920 SNRPB2P08579 225 aaKnown RBP6.51□□□□□ -1.37
SNHG1-225ENST00000545920 IQCF3P0C7M6 154 aa6.51□□□□□ -1.37
SNHG1-225ENST00000545920 FAM200BP0CF97 657 aa6.51□□□□□ -1.37
SNHG1-225ENST00000545920 SLC35E2BP0CK96 405 aa6.51□□□□□ -1.37
SNHG1-225ENST00000545920 UMPSP11172 480 aa6.51□□□□□ -1.37
SNHG1-225ENST00000545920 HSD17B1P14061 328 aa6.51□□□□□ -1.37
SNHG1-225ENST00000545920 ERCC2P18074 760 aa6.51□□□□□ -1.37
SNHG1-225ENST00000545920 CDH2P19022 906 aaPredicted RBP6.51□□□□□ -1.37
SNHG1-225ENST00000545920 LHX1P48742 406 aa6.51□□□□□ -1.37
SNHG1-225ENST00000545920 SLC12A2P55011 1212 aa6.51□□□□□ -1.37
SNHG1-225ENST00000545920 FCGRTP55899 365 aa6.51□□□□□ -1.37
SNHG1-225ENST00000545920 STX1BP61266 288 aa6.51□□□□□ -1.37
SNHG1-225ENST00000545920 MRPS22P82650 360 aaKnown RBP6.51□□□□□ -1.37
SNHG1-225ENST00000545920 MPP1Q00013 466 aa6.51□□□□□ -1.37
SNHG1-225ENST00000545920 NFKB2Q00653 900 aa6.51□□□□□ -1.37
SNHG1-225ENST00000545920 MYBPC1Q00872 1141 aa6.51□□□□□ -1.37
SNHG1-225ENST00000545920 NRG1Q02297 640 aaPredicted RBP6.51□□□□□ -1.37
SNHG1-225ENST00000545920 TNP2Q05952 138 aa6.51□□□□□ -1.37
SNHG1-225ENST00000545920 FSTL1Q12841 308 aa6.51□□□□□ -1.37
SNHG1-225ENST00000545920 MTA1Q13330 715 aa6.51□□□□□ -1.37
SNHG1-225ENST00000545920 SERINC3Q13530 473 aa6.51□□□□□ -1.37
SNHG1-225ENST00000545920 CEACAM7Q14002 265 aa6.51□□□□□ -1.37
SNHG1-225ENST00000545920 COL9A2Q14055 689 aaPredicted RBP6.51□□□□□ -1.37
SNHG1-225ENST00000545920 BTG3Q14201 252 aaPredicted RBP6.51□□□□□ -1.37
SNHG1-225ENST00000545920 INPP5AQ14642 412 aa6.51□□□□□ -1.37
SNHG1-225ENST00000545920 ACAP2Q15057 778 aa6.51□□□□□ -1.37
SNHG1-225ENST00000545920 MGAT5BQ3V5L5 792 aa6.51□□□□□ -1.37
SNHG1-225ENST00000545920 DCAF6Q58WW2 860 aa6.51□□□□□ -1.37
SNHG1-225ENST00000545920 PPM1JQ5JR12 505 aa6.51□□□□□ -1.37
SNHG1-225ENST00000545920 BRMS1LQ5PSV4 323 aa6.51□□□□□ -1.37
SNHG1-225ENST00000545920 PM20D1Q6GTS8 502 aa6.51□□□□□ -1.37
SNHG1-225ENST00000545920 KRT80Q6KB66 452 aa6.51□□□□□ -1.37
SNHG1-225ENST00000545920 NAPRTQ6XQN6 538 aa6.51□□□□□ -1.37
SNHG1-225ENST00000545920 LINC00299Q6ZSB3 139 aa6.51□□□□□ -1.37
SNHG1-225ENST00000545920 CMC1Q7Z7K0 106 aa6.51□□□□□ -1.37
SNHG1-225ENST00000545920 PIGZQ86VD9 579 aa6.51□□□□□ -1.37
SNHG1-225ENST00000545920 FAM131BQ86XD5 332 aa6.51□□□□□ -1.37
SNHG1-225ENST00000545920 CAMK1DQ8IU85 385 aa6.51□□□□□ -1.37
SNHG1-225ENST00000545920 TRIML2Q8N7C3 387 aa6.51□□□□□ -1.37
SNHG1-225ENST00000545920 KDM1BQ8NB78 822 aa6.51□□□□□ -1.37
SNHG1-225ENST00000545920 PDPRQ8NCN5 879 aa6.51□□□□□ -1.37
SNHG1-225ENST00000545920 B3GALNT2Q8NCR0 500 aa6.51□□□□□ -1.37
SNHG1-225ENST00000545920 C2CD4AQ8NCU7 369 aaPredicted RBP6.51□□□□□ -1.37
SNHG1-225ENST00000545920 OR52K1Q8NGK4 314 aa6.51□□□□□ -1.37
SNHG1-225ENST00000545920 ZFP28Q8NHY6 868 aa6.51□□□□□ -1.37
SNHG1-225ENST00000545920 MAPK15Q8TD08 544 aa6.51□□□□□ -1.37
SNHG1-225ENST00000545920 DPF3Q92784 378 aa6.51□□□□□ -1.37
SNHG1-225ENST00000545920 RCN3Q96D15 328 aa6.51□□□□□ -1.37
SNHG1-225ENST00000545920 RMND5BQ96G75 393 aaPredicted RBP6.51□□□□□ -1.37
SNHG1-225ENST00000545920 EAF1Q96JC9 268 aaPredicted RBP6.51□□□□□ -1.37
SNHG1-225ENST00000545920 SCYL1Q96KG9 808 aa6.51□□□□□ -1.37
SNHG1-225ENST00000545920 CAMKK2Q96RR4 588 aa6.51□□□□□ -1.37
SNHG1-225ENST00000545920 GAS2L1Q99501 681 aaPredicted RBP6.51□□□□□ -1.37
SNHG1-225ENST00000545920 CCT7Q99832 543 aa6.51□□□□□ -1.37
SNHG1-225ENST00000545920 TUBA1CQ9BQE3 449 aa6.51□□□□□ -1.37
SNHG1-225ENST00000545920 C9orf16Q9BUW7 83 aa6.51□□□□□ -1.37
SNHG1-225ENST00000545920 MAGEB5Q9BZ81 275 aa6.51□□□□□ -1.37
SNHG1-225ENST00000545920 SENP6Q9GZR1 1112 aaPredicted RBP6.51□□□□□ -1.37
SNHG1-225ENST00000545920 PLGRKTQ9HBL7 147 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms