RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 LRRN4Q8WUT4 740 aa15.8■□□□□ 0.12
CCDC78-216ENST00000544996 RBM41Q96IZ5 413 aaKnown RBP15.8■□□□□ 0.12
CCDC78-216ENST00000544996 MBNL1Q9NR56 388 aaKnown RBP15.8■□□□□ 0.12
CCDC78-216ENST00000544996 REXO2Q9Y3B8 237 aaKnown RBP15.8■□□□□ 0.12
CCDC78-216ENST00000544996 DUSP10Q9Y6W6 482 aa15.8■□□□□ 0.12
CCDC78-216ENST00000544996 NEMP2A6NFY4 417 aa15.79■□□□□ 0.12
CCDC78-216ENST00000544996 GOLGA8CPA6NN73 597 aa15.79■□□□□ 0.12
CCDC78-216ENST00000544996 CST8O60676 142 aa15.79■□□□□ 0.12
CCDC78-216ENST00000544996 RECQL5O94762 991 aaPredicted RBP15.79■□□□□ 0.12
CCDC78-216ENST00000544996 LDOC1O95751 146 aaPredicted RBP15.79■□□□□ 0.12
CCDC78-216ENST00000544996 CSF2P04141 144 aa15.79■□□□□ 0.12
CCDC78-216ENST00000544996 HLA-DQB2P05538 268 aa15.79■□□□□ 0.12
CCDC78-216ENST00000544996 NME1P15531 152 aaKnown RBP15.79■□□□□ 0.12
CCDC78-216ENST00000544996 TGM2P21980 687 aa15.79■□□□□ 0.12
CCDC78-216ENST00000544996 DGKAP23743 735 aa15.79■□□□□ 0.12
CCDC78-216ENST00000544996 GSDMDP57764 484 aa15.79■□□□□ 0.12
CCDC78-216ENST00000544996 IFI35P80217 286 aaPredicted RBP15.79■□□□□ 0.12
CCDC78-216ENST00000544996 DSC2Q02487 901 aa15.79■□□□□ 0.12
CCDC78-216ENST00000544996 KIF5AQ12840 1032 aa15.79■□□□□ 0.12
CCDC78-216ENST00000544996 ACOX1Q15067 660 aa15.79■□□□□ 0.12
CCDC78-216ENST00000544996 IRF4Q15306 451 aa15.79■□□□□ 0.12
CCDC78-216ENST00000544996 TAZQ16635 292 aa15.79■□□□□ 0.12
CCDC78-216ENST00000544996 WSCD2Q2TBF2 565 aa15.79■□□□□ 0.12
CCDC78-216ENST00000544996 KAZNQ674X7 775 aa15.79■□□□□ 0.12
CCDC78-216ENST00000544996 USP45Q70EL2 814 aa15.79■□□□□ 0.12
CCDC78-216ENST00000544996 TMEM139Q8IV31 216 aa15.79■□□□□ 0.12
CCDC78-216ENST00000544996 EXD1Q8NHP7 514 aa15.79■□□□□ 0.12
CCDC78-216ENST00000544996 CNDP2Q96KP4 475 aaKnown RBP15.79■□□□□ 0.12
CCDC78-216ENST00000544996 OLFM3Q96PB7 478 aa15.79■□□□□ 0.12
CCDC78-216ENST00000544996 LACRTQ9GZZ8 138 aa15.79■□□□□ 0.12
CCDC78-216ENST00000544996 KCTD5Q9NXV2 234 aa15.79■□□□□ 0.12
CCDC78-216ENST00000544996 B4GALT6Q9UBX8 382 aa15.79■□□□□ 0.12
CCDC78-216ENST00000544996 SALL4Q9UJQ4 1053 aa15.79■□□□□ 0.12
CCDC78-216ENST00000544996 NCOR2Q9Y618 2525 aa15.79■□□□□ 0.12
CCDC78-216ENST00000544996 SPTBN2O15020 2390 aa15.78■□□□□ 0.12
CCDC78-216ENST00000544996 PJA2O43164 708 aa15.78■□□□□ 0.12
CCDC78-216ENST00000544996 PIAS2O75928 621 aa15.78■□□□□ 0.12
CCDC78-216ENST00000544996 ATXN1LP0C7T5 689 aaKnown RBP15.78■□□□□ 0.12
CCDC78-216ENST00000544996 ALPPL2P10696 532 aa15.78■□□□□ 0.12
CCDC78-216ENST00000544996 HTR1BP28222 390 aa15.78■□□□□ 0.12
CCDC78-216ENST00000544996 VIPR1P32241 457 aa15.78■□□□□ 0.12
CCDC78-216ENST00000544996 PEX5P50542 639 aa15.78■□□□□ 0.12
CCDC78-216ENST00000544996 EPHB1P54762 984 aa15.78■□□□□ 0.12
CCDC78-216ENST00000544996 ARHGEF7Q14155 803 aa15.78■□□□□ 0.12
CCDC78-216ENST00000544996 INPP5AQ14642 412 aa15.78■□□□□ 0.12
CCDC78-216ENST00000544996 ZNF542PQ5EBM4 170 aa15.78■□□□□ 0.12
CCDC78-216ENST00000544996 NPNTQ6UXI9 565 aa15.78■□□□□ 0.12
CCDC78-216ENST00000544996 KANSL1Q7Z3B3 1105 aa15.78■□□□□ 0.12
CCDC78-216ENST00000544996 SLCO6A1Q86UG4 719 aa15.78■□□□□ 0.12
CCDC78-216ENST00000544996 SLC25A45Q8N413 288 aa15.78■□□□□ 0.12
CCDC78-216ENST00000544996 PNPLA1Q8N8W4 532 aa15.78■□□□□ 0.12
CCDC78-216ENST00000544996 ATL2Q8NHH9 583 aa15.78■□□□□ 0.12
CCDC78-216ENST00000544996 BTN2A2Q8WVV5 523 aa15.78■□□□□ 0.12
CCDC78-216ENST00000544996 ADAMTS14Q8WXS8 1223 aa15.78■□□□□ 0.12
CCDC78-216ENST00000544996 P3H4Q92791 437 aa15.78■□□□□ 0.12
CCDC78-216ENST00000544996 SCRN2Q96FV2 425 aa15.78■□□□□ 0.12
CCDC78-216ENST00000544996 IL12RB2Q99665 862 aa15.78■□□□□ 0.12
CCDC78-216ENST00000544996 SEPT10Q9P0V9 454 aa15.78■□□□□ 0.12
CCDC78-216ENST00000544996 TRPM6Q9BX84 2022 aa15.78■□□□□ 0.12
CCDC78-216ENST00000544996 KNL1Q8NG31 2342 aa15.77■□□□□ 0.12
CCDC78-216ENST00000544996 CCDC66A2RUB6 948 aa15.77■□□□□ 0.12
CCDC78-216ENST00000544996 ENC1O14682 589 aa15.77■□□□□ 0.12
CCDC78-216ENST00000544996 HYAL3O43820 417 aaPredicted RBP15.77■□□□□ 0.12
CCDC78-216ENST00000544996 HEXIM1O94992 359 aaKnown RBP15.77■□□□□ 0.12
CCDC78-216ENST00000544996 PCCBP05166 539 aa15.77■□□□□ 0.12
CCDC78-216ENST00000544996 JUNDP17535 347 aa15.77■□□□□ 0.12
CCDC78-216ENST00000544996 CTNNA1P35221 906 aaKnown RBP15.77■□□□□ 0.12
CCDC78-216ENST00000544996 CETN2P41208 172 aa15.77■□□□□ 0.12
CCDC78-216ENST00000544996 MARCKSL1P49006 195 aa15.77■□□□□ 0.12
CCDC78-216ENST00000544996 COPS2P61201 443 aa15.77■□□□□ 0.12
CCDC78-216ENST00000544996 RPL26P61254 145 aaKnown RBP15.77■□□□□ 0.12
CCDC78-216ENST00000544996 ZNF211Q13398 564 aaPredicted RBP15.77■□□□□ 0.12
CCDC78-216ENST00000544996 MTM1Q13496 603 aa15.77■□□□□ 0.12
CCDC78-216ENST00000544996 LLGL1Q15334 1064 aa15.77■□□□□ 0.12
CCDC78-216ENST00000544996 CCDC157Q569K6 752 aa15.77■□□□□ 0.12
CCDC78-216ENST00000544996 MACC1Q6ZN28 852 aa15.77■□□□□ 0.12
CCDC78-216ENST00000544996 RAB44Q7Z6P3 723 aaPredicted RBP15.77■□□□□ 0.12
CCDC78-216ENST00000544996 SYCE1Q8N0S2 351 aa15.77■□□□□ 0.12
CCDC78-216ENST00000544996 CHCHD4Q8N4Q1 142 aa15.77■□□□□ 0.12
CCDC78-216ENST00000544996 ARRDC2Q8TBH0 407 aa15.77■□□□□ 0.12
CCDC78-216ENST00000544996 TFB1MQ8WVM0 346 aaKnown RBP15.77■□□□□ 0.12
CCDC78-216ENST00000544996 PIH1D2Q8WWB5 315 aa15.77■□□□□ 0.12
CCDC78-216ENST00000544996 KRT35Q92764 455 aa15.77■□□□□ 0.12
CCDC78-216ENST00000544996 MCCC1Q96RQ3 725 aaPredicted RBP15.77■□□□□ 0.12
CCDC78-216ENST00000544996 APOOQ9BUR5 198 aa15.77■□□□□ 0.12
CCDC78-216ENST00000544996 SCNM1Q9BWG6 230 aa15.77■□□□□ 0.12
CCDC78-216ENST00000544996 SLC13A1Q9BZW2 595 aa15.77■□□□□ 0.12
CCDC78-216ENST00000544996 SAE1Q9UBE0 346 aaPredicted RBP15.77■□□□□ 0.12
CCDC78-216ENST00000544996 RPL26L1Q9UNX3 145 aaKnown RBP15.77■□□□□ 0.12
CCDC78-216ENST00000544996 PPIL1Q9Y3C6 166 aa15.77■□□□□ 0.12
CCDC78-216ENST00000544996 PCDHA3Q9Y5H8 950 aa15.77■□□□□ 0.12
CCDC78-216ENST00000544996 TMEM131Q92545 1883 aa15.76■□□□□ 0.11
CCDC78-216ENST00000544996 hCG_1818297A0A087WSY0 165 aa15.76■□□□□ 0.11
CCDC78-216ENST00000544996 MACROD2A1Z1Q3 448 aa15.76■□□□□ 0.11
CCDC78-216ENST00000544996 NPIPB15A6NHN6 443 aaPredicted RBP15.76■□□□□ 0.11
CCDC78-216ENST00000544996 PSMD11O00231 422 aa15.76■□□□□ 0.11
CCDC78-216ENST00000544996 FFAR2O15552 330 aa15.76■□□□□ 0.11
CCDC78-216ENST00000544996 MTSS1O43312 755 aa15.76■□□□□ 0.11
CCDC78-216ENST00000544996 FZD6O60353 706 aa15.76■□□□□ 0.11
CCDC78-216ENST00000544996 PDHA1P08559 390 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms