RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 HLA-BQ31612 363 aa7.46□□□□□ -1.22
CPSF7-224ENST00000544990 ODF2Q5BJF6 829 aa7.46□□□□□ -1.22
CPSF7-224ENST00000544990 CFAP58Q5T655 872 aa7.46□□□□□ -1.22
CPSF7-224ENST00000544990 ATXN7L2Q5T6C5 722 aaPredicted RBP7.46□□□□□ -1.22
CPSF7-224ENST00000544990 AFMIDQ63HM1 303 aa7.46□□□□□ -1.22
CPSF7-224ENST00000544990 TXNRD3NBQ6F5E7 133 aa7.46□□□□□ -1.22
CPSF7-224ENST00000544990 NAPEPLDQ6IQ20 393 aa7.46□□□□□ -1.22
CPSF7-224ENST00000544990 KIAA1161Q6NSJ0 714 aa7.46□□□□□ -1.22
CPSF7-224ENST00000544990 GDPD4Q6W3E5 623 aa7.46□□□□□ -1.22
CPSF7-224ENST00000544990 TTC7BQ86TV6 843 aa7.46□□□□□ -1.22
CPSF7-224ENST00000544990 HORMAD1Q86X24 394 aa7.46□□□□□ -1.22
CPSF7-224ENST00000544990 LRRC49Q8IUZ0 686 aa7.46□□□□□ -1.22
CPSF7-224ENST00000544990 ARHGAP12Q8IWW6 846 aa7.46□□□□□ -1.22
CPSF7-224ENST00000544990 CCDC170Q8IYT3 715 aa7.46□□□□□ -1.22
CPSF7-224ENST00000544990 BBS5Q8N3I7 341 aa7.46□□□□□ -1.22
CPSF7-224ENST00000544990 TC2NQ8N9U0 490 aa7.46□□□□□ -1.22
CPSF7-224ENST00000544990 MFSD2AQ8NA29 543 aa7.46□□□□□ -1.22
CPSF7-224ENST00000544990 OR6K2Q8NGY2 324 aa7.46□□□□□ -1.22
CPSF7-224ENST00000544990 HCAR2Q8TDS4 363 aa7.46□□□□□ -1.22
CPSF7-224ENST00000544990 NSMCE1Q8WV22 266 aa7.46□□□□□ -1.22
CPSF7-224ENST00000544990 RFFLQ8WZ73 363 aa7.46□□□□□ -1.22
CPSF7-224ENST00000544990 SLC6A18Q96N87 628 aa7.46□□□□□ -1.22
CPSF7-224ENST00000544990 KLHL32Q96NJ5 620 aa7.46□□□□□ -1.22
CPSF7-224ENST00000544990 ZNF599Q96NL3 588 aa7.46□□□□□ -1.22
CPSF7-224ENST00000544990 CSPG4P5Q96PW8 444 aa7.46□□□□□ -1.22
CPSF7-224ENST00000544990 ORAI3Q9BRQ5 295 aa7.46□□□□□ -1.22
CPSF7-224ENST00000544990 CINPQ9BW66 212 aaPredicted RBP7.46□□□□□ -1.22
CPSF7-224ENST00000544990 CALN1Q9BXU9 219 aa7.46□□□□□ -1.22
CPSF7-224ENST00000544990 CPEB1Q9BZB8 566 aaKnown RBP7.46□□□□□ -1.22
CPSF7-224ENST00000544990 EBF2Q9HAK2 575 aa7.46□□□□□ -1.22
CPSF7-224ENST00000544990 PDFQ9HBH1 243 aa7.46□□□□□ -1.22
CPSF7-224ENST00000544990 PCDH18Q9HCL0 1135 aa7.46□□□□□ -1.22
CPSF7-224ENST00000544990 IPO11Q9UI26 975 aaKnown RBP7.46□□□□□ -1.22
CPSF7-224ENST00000544990 TMEM131Q92545 1883 aa7.46□□□□□ -1.22
CPSF7-224ENST00000544990 SHROOM3Q8TF72 1996 aa7.46□□□□□ -1.22
CPSF7-224ENST00000544990 ANKRD36A6QL64 1941 aa7.45□□□□□ -1.22
CPSF7-224ENST00000544990 A0A1W2PQU0 124 aa7.45□□□□□ -1.22
CPSF7-224ENST00000544990 GOLGA6L6A8MZA4 724 aa7.45□□□□□ -1.22
CPSF7-224ENST00000544990 LCE2BO14633 110 aa7.45□□□□□ -1.22
CPSF7-224ENST00000544990 SLC31A1O15431 190 aa7.45□□□□□ -1.22
CPSF7-224ENST00000544990 GJB3O75712 270 aa7.45□□□□□ -1.22
CPSF7-224ENST00000544990 MTA2O94776 668 aa7.45□□□□□ -1.22
CPSF7-224ENST00000544990 AKT2P31751 481 aa7.45□□□□□ -1.22
CPSF7-224ENST00000544990 GKP32189 559 aa7.45□□□□□ -1.22
CPSF7-224ENST00000544990 HSPA9P38646 679 aaKnown RBP7.45□□□□□ -1.22
CPSF7-224ENST00000544990 ADH7P40394 386 aa7.45□□□□□ -1.22
CPSF7-224ENST00000544990 SLC1A1P43005 524 aa7.45□□□□□ -1.22
CPSF7-224ENST00000544990 CTSKP43235 329 aa7.45□□□□□ -1.22
CPSF7-224ENST00000544990 NOP2P46087 812 aaKnown RBP7.45□□□□□ -1.22
CPSF7-224ENST00000544990 CSNK1DP48730 415 aa7.45□□□□□ -1.22
CPSF7-224ENST00000544990 ST13P50502 369 aaKnown RBP7.45□□□□□ -1.22
CPSF7-224ENST00000544990 SUOXP51687 545 aa7.45□□□□□ -1.22
CPSF7-224ENST00000544990 TAS2R38P59533 333 aa7.45□□□□□ -1.22
CPSF7-224ENST00000544990 NSUN2Q08J23 767 aaKnown RBP eCLIP7.45□□□□□ -1.22
CPSF7-224ENST00000544990 SGCGQ13326 291 aa7.45□□□□□ -1.22
CPSF7-224ENST00000544990 DPYSL3Q14195 570 aa7.45□□□□□ -1.22
CPSF7-224ENST00000544990 KIF19Q2TAC6 998 aa7.45□□□□□ -1.22
CPSF7-224ENST00000544990 ATP13A4Q4VNC1 1196 aa7.45□□□□□ -1.22
CPSF7-224ENST00000544990 ANKRD20A8PQ5CZ79 823 aa7.45□□□□□ -1.22
CPSF7-224ENST00000544990 PSAPL1Q6NUJ1 521 aa7.45□□□□□ -1.22
CPSF7-224ENST00000544990 PARS2Q7L3T8 475 aaKnown RBP7.45□□□□□ -1.22
CPSF7-224ENST00000544990 SRLQ86TD4 932 aa7.45□□□□□ -1.22
CPSF7-224ENST00000544990 IQCHQ86VS3 1027 aa7.45□□□□□ -1.22
CPSF7-224ENST00000544990 GAS2L3Q86XJ1 694 aa7.45□□□□□ -1.22
CPSF7-224ENST00000544990 TMTC1Q8IUR5 882 aa7.45□□□□□ -1.22
CPSF7-224ENST00000544990 CCNJLQ8IV13 435 aa7.45□□□□□ -1.22
CPSF7-224ENST00000544990 OXR1Q8N573 874 aa7.45□□□□□ -1.22
CPSF7-224ENST00000544990 ATPAF2Q8N5M1 289 aa7.45□□□□□ -1.22
CPSF7-224ENST00000544990 NPWQ8N729 165 aa7.45□□□□□ -1.22
CPSF7-224ENST00000544990 PAF1Q8N7H5 531 aa7.45□□□□□ -1.22
CPSF7-224ENST00000544990 GOLGA6L1Q8N7Z2 621 aa7.45□□□□□ -1.22
CPSF7-224ENST00000544990 TMEM102Q8N9M5 508 aaPredicted RBP7.45□□□□□ -1.22
CPSF7-224ENST00000544990 OR2I1PQ8NGU4 316 aa7.45□□□□□ -1.22
CPSF7-224ENST00000544990 FAM71BQ8TC56 605 aa7.45□□□□□ -1.22
CPSF7-224ENST00000544990 KLHDC7BQ96G42 594 aa7.45□□□□□ -1.22
CPSF7-224ENST00000544990 ZNF641Q96N77 438 aaPredicted RBP7.45□□□□□ -1.22
CPSF7-224ENST00000544990 PANX2Q96RD6 677 aa7.45□□□□□ -1.22
CPSF7-224ENST00000544990 TUBGCP5Q96RT8 1024 aa7.45□□□□□ -1.22
CPSF7-224ENST00000544990 ZNF670Q9BS34 389 aa7.45□□□□□ -1.22
CPSF7-224ENST00000544990 GDF3Q9NR23 364 aa7.45□□□□□ -1.22
CPSF7-224ENST00000544990 TM7SF3Q9NS93 570 aa7.45□□□□□ -1.22
CPSF7-224ENST00000544990 ETNK2Q9NVF9 386 aa7.45□□□□□ -1.22
CPSF7-224ENST00000544990 HAUS2Q9NVX0 235 aa7.45□□□□□ -1.22
CPSF7-224ENST00000544990 DKK3Q9UBP4 350 aa7.45□□□□□ -1.22
CPSF7-224ENST00000544990 LHX3Q9UBR4 397 aa7.45□□□□□ -1.22
CPSF7-224ENST00000544990 GDF2Q9UK05 429 aaPredicted RBP7.45□□□□□ -1.22
CPSF7-224ENST00000544990 PCDHGB2Q9Y5G2 931 aa7.45□□□□□ -1.22
CPSF7-224ENST00000544990 FADS3Q9Y5Q0 445 aa7.45□□□□□ -1.22
CPSF7-224ENST00000544990 SNX11Q9Y5W9 270 aa7.45□□□□□ -1.22
CPSF7-224ENST00000544990 SLCO1B1Q9Y6L6 691 aa7.45□□□□□ -1.22
CPSF7-224ENST00000544990 PCNX2A6NKB5 2137 aa7.45□□□□□ -1.22
CPSF7-224ENST00000544990 A0A1W2PR77 199 aa7.44□□□□□ -1.22
CPSF7-224ENST00000544990 MED19A0JLT2 244 aaPredicted RBP7.44□□□□□ -1.22
CPSF7-224ENST00000544990 ADARB2-AS1A8MUL3 147 aa7.44□□□□□ -1.22
CPSF7-224ENST00000544990 TLR4O00206 839 aa7.44□□□□□ -1.22
CPSF7-224ENST00000544990 RNF103O00237 685 aa7.44□□□□□ -1.22
CPSF7-224ENST00000544990 TERTO14746 1132 aaKnown RBP7.44□□□□□ -1.22
CPSF7-224ENST00000544990 YKT6O15498 198 aa7.44□□□□□ -1.22
CPSF7-224ENST00000544990 FLRT2O43155 660 aa7.44□□□□□ -1.22
CPSF7-224ENST00000544990 NEBLO76041 1014 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms