RNA–Protein interactions for RNA: ENST00000544913.2

HMGCS2-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

TSL 2 BASIC

Gene HMGCS2, Length 1,925 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-204ENST00000544913 KLC4Q9NSK0 619 aa7.05□□□□□ -1.28
HMGCS2-204ENST00000544913 THG1LQ9NWX6 298 aaKnown RBP7.05□□□□□ -1.28
HMGCS2-204ENST00000544913 SYBUQ9NX95 663 aa7.05□□□□□ -1.28
HMGCS2-204ENST00000544913 CHMP2BQ9UQN3 213 aa7.05□□□□□ -1.28
HMGCS2-204ENST00000544913 TTLL3Q9Y4R7 772 aa7.05□□□□□ -1.28
HMGCS2-204ENST00000544913 CKAP5Q14008 2032 aa7.05□□□□□ -1.28
HMGCS2-204ENST00000544913 TCRBV9S1A1TA0A576 114 aa7.05□□□□□ -1.28
HMGCS2-204ENST00000544913 TTC34A8MYJ7 566 aa7.05□□□□□ -1.28
HMGCS2-204ENST00000544913 HTRA2O43464 458 aaPredicted RBP7.05□□□□□ -1.28
HMGCS2-204ENST00000544913 NARSO43776 548 aaKnown RBP7.05□□□□□ -1.28
HMGCS2-204ENST00000544913 EDF1O60869 148 aaKnown RBP7.05□□□□□ -1.28
HMGCS2-204ENST00000544913 TGDSO95455 350 aa7.05□□□□□ -1.28
HMGCS2-204ENST00000544913 PRKCGP05129 697 aa7.05□□□□□ -1.28
HMGCS2-204ENST00000544913 ATP5BP06576 529 aaKnown RBP7.05□□□□□ -1.28
HMGCS2-204ENST00000544913 ASGR2P07307 311 aa7.05□□□□□ -1.28
HMGCS2-204ENST00000544913 DLDP09622 509 aaKnown RBP7.05□□□□□ -1.28
HMGCS2-204ENST00000544913 TROVE2P10155 538 aaKnown RBP eCLIP7.05□□□□□ -1.28
HMGCS2-204ENST00000544913 TPH1P17752 444 aa7.05□□□□□ -1.28
HMGCS2-204ENST00000544913 ARNTP27540 789 aa7.05□□□□□ -1.28
HMGCS2-204ENST00000544913 HNRNPH1P31943 449 aaKnown RBP7.05□□□□□ -1.28
HMGCS2-204ENST00000544913 SLC8A1P32418 973 aa7.05□□□□□ -1.28
HMGCS2-204ENST00000544913 EIF2DP41214 584 aaKnown RBP7.05□□□□□ -1.28
HMGCS2-204ENST00000544913 GEMP55040 296 aa7.05□□□□□ -1.28
HMGCS2-204ENST00000544913 BNIP1Q12981 228 aa7.05□□□□□ -1.28
HMGCS2-204ENST00000544913 ENPP2Q13822 863 aa7.05□□□□□ -1.28
HMGCS2-204ENST00000544913 SLC1A5Q15758 541 aa7.05□□□□□ -1.28
HMGCS2-204ENST00000544913 SIRPB2Q5JXA9 342 aa7.05□□□□□ -1.28
HMGCS2-204ENST00000544913 UNC5AQ6ZN44 842 aa7.05□□□□□ -1.28
HMGCS2-204ENST00000544913 DPY19L3Q6ZPD9 716 aa7.05□□□□□ -1.28
HMGCS2-204ENST00000544913 Q6ZVU0 165 aa7.05□□□□□ -1.28
HMGCS2-204ENST00000544913 UNC5BQ8IZJ1 945 aa7.05□□□□□ -1.28
HMGCS2-204ENST00000544913 CPA6Q8N4T0 437 aa7.05□□□□□ -1.28
HMGCS2-204ENST00000544913 ZNF557Q8N988 423 aaPredicted RBP7.05□□□□□ -1.28
HMGCS2-204ENST00000544913 BANPQ8N9N5 519 aa7.05□□□□□ -1.28
HMGCS2-204ENST00000544913 CCDC63Q8NA47 563 aa7.05□□□□□ -1.28
HMGCS2-204ENST00000544913 CHST14Q8NCH0 376 aa7.05□□□□□ -1.28
HMGCS2-204ENST00000544913 OR2A12Q8NGT7 310 aa7.05□□□□□ -1.28
HMGCS2-204ENST00000544913 GSDMBQ8TAX9 411 aa7.05□□□□□ -1.28
HMGCS2-204ENST00000544913 GDAP1Q8TB36 358 aa7.05□□□□□ -1.28
HMGCS2-204ENST00000544913 WFIKKN2Q8TEU8 576 aa7.05□□□□□ -1.28
HMGCS2-204ENST00000544913 SPOCK2Q92563 424 aa7.05□□□□□ -1.28
HMGCS2-204ENST00000544913 CDKL2Q92772 493 aa7.05□□□□□ -1.28
HMGCS2-204ENST00000544913 ECHDC3Q96DC8 303 aa7.05□□□□□ -1.28
HMGCS2-204ENST00000544913 ZNF778Q96MU6 729 aa7.05□□□□□ -1.28
HMGCS2-204ENST00000544913 EBNA1BP2Q99848 306 aaKnown RBP7.05□□□□□ -1.28
HMGCS2-204ENST00000544913 PAIP2Q9BPZ3 127 aaKnown RBP7.05□□□□□ -1.28
HMGCS2-204ENST00000544913 CEP44Q9C0F1 390 aa7.05□□□□□ -1.28
HMGCS2-204ENST00000544913 IQCGQ9H095 443 aaKnown RBP7.05□□□□□ -1.28
HMGCS2-204ENST00000544913 TRPV5Q9NQA5 729 aa7.05□□□□□ -1.28
HMGCS2-204ENST00000544913 SMYD2Q9NRG4 433 aa7.05□□□□□ -1.28
HMGCS2-204ENST00000544913 TXLNGQ9NUQ3 528 aa7.05□□□□□ -1.28
HMGCS2-204ENST00000544913 MKS1Q9NXB0 559 aa7.05□□□□□ -1.28
HMGCS2-204ENST00000544913 ELOVL2Q9NXB9 296 aa7.05□□□□□ -1.28
HMGCS2-204ENST00000544913 LIMD1Q9UGP4 676 aa7.05□□□□□ -1.28
HMGCS2-204ENST00000544913 ZC3H7BQ9UGR2 993 aaKnown RBP7.05□□□□□ -1.28
HMGCS2-204ENST00000544913 PHTF1Q9UMS5 762 aa7.05□□□□□ -1.28
HMGCS2-204ENST00000544913 AAR2Q9Y312 384 aaKnown RBP7.05□□□□□ -1.28
HMGCS2-204ENST00000544913 SPO11Q9Y5K1 396 aa7.05□□□□□ -1.28
HMGCS2-204ENST00000544913 ZCWPW2A0A1B0GU75 182 aa7.04□□□□□ -1.28
HMGCS2-204ENST00000544913 VGLL3A8MV65 326 aa7.04□□□□□ -1.28
HMGCS2-204ENST00000544913 WASH3PC4AMC7 463 aa7.04□□□□□ -1.28
HMGCS2-204ENST00000544913 K7EQS6 105 aa7.04□□□□□ -1.28
HMGCS2-204ENST00000544913 KLF11O14901 512 aa7.04□□□□□ -1.28
HMGCS2-204ENST00000544913 CHUKO15111 745 aa7.04□□□□□ -1.28
HMGCS2-204ENST00000544913 PIAS1O75925 651 aa7.04□□□□□ -1.28
HMGCS2-204ENST00000544913 KAT7O95251 611 aa7.04□□□□□ -1.28
HMGCS2-204ENST00000544913 GSRP00390 522 aa7.04□□□□□ -1.28
HMGCS2-204ENST00000544913 EPOP01588 193 aa7.04□□□□□ -1.28
HMGCS2-204ENST00000544913 CTSLP07711 333 aa7.04□□□□□ -1.28
HMGCS2-204ENST00000544913 PSMA3P25788 255 aa7.04□□□□□ -1.28
HMGCS2-204ENST00000544913 CTHP32929 405 aa7.04□□□□□ -1.28
HMGCS2-204ENST00000544913 RPA3P35244 121 aaPredicted RBP7.04□□□□□ -1.28
HMGCS2-204ENST00000544913 KIR2DL1P43626 348 aaPredicted RBP7.04□□□□□ -1.28
HMGCS2-204ENST00000544913 SCNN1BP51168 640 aa7.04□□□□□ -1.28
HMGCS2-204ENST00000544913 SESN2P58004 480 aaPredicted RBP7.04□□□□□ -1.28
HMGCS2-204ENST00000544913 RHOAP61586 193 aa7.04□□□□□ -1.28
HMGCS2-204ENST00000544913 AP1S1P61966 158 aa7.04□□□□□ -1.28
HMGCS2-204ENST00000544913 EFTUD2Q15029 972 aaKnown RBP eCLIP7.04□□□□□ -1.28
HMGCS2-204ENST00000544913 DLG2Q15700 870 aa7.04□□□□□ -1.28
HMGCS2-204ENST00000544913 PCSK7Q16549 785 aa7.04□□□□□ -1.28
HMGCS2-204ENST00000544913 GRAMD4Q6IC98 578 aa7.04□□□□□ -1.28
HMGCS2-204ENST00000544913 NAPEPLDQ6IQ20 393 aa7.04□□□□□ -1.28
HMGCS2-204ENST00000544913 PTCRAQ6ISU1 281 aaPredicted RBP7.04□□□□□ -1.28
HMGCS2-204ENST00000544913 TRMT10BQ6PF06 316 aaKnown RBP7.04□□□□□ -1.28
HMGCS2-204ENST00000544913 LVRNQ6Q4G3 990 aa7.04□□□□□ -1.28
HMGCS2-204ENST00000544913 TMEM135Q86UB9 458 aa7.04□□□□□ -1.28
HMGCS2-204ENST00000544913 CAMK1DQ8IU85 385 aa7.04□□□□□ -1.28
HMGCS2-204ENST00000544913 ZNF687Q8N1G0 1237 aa7.04□□□□□ -1.28
HMGCS2-204ENST00000544913 ZNF366Q8N895 744 aa7.04□□□□□ -1.28
HMGCS2-204ENST00000544913 OR2AP1Q8NGE2 309 aa7.04□□□□□ -1.28
HMGCS2-204ENST00000544913 RAB3IL1Q8TBN0 382 aa7.04□□□□□ -1.28
HMGCS2-204ENST00000544913 MZB1Q8WU39 189 aa7.04□□□□□ -1.28
HMGCS2-204ENST00000544913 PTPRN2Q92932 1015 aa7.04□□□□□ -1.28
HMGCS2-204ENST00000544913 APOPT1Q96IL0 206 aa7.04□□□□□ -1.28
HMGCS2-204ENST00000544913 FCRL3Q96P31 734 aaPredicted RBP7.04□□□□□ -1.28
HMGCS2-204ENST00000544913 LRRC37BQ96QE4 947 aa7.04□□□□□ -1.28
HMGCS2-204ENST00000544913 RAB3IPQ96QF0 476 aaPredicted RBP7.04□□□□□ -1.28
HMGCS2-204ENST00000544913 ACOX2Q99424 681 aa7.04□□□□□ -1.28
HMGCS2-204ENST00000544913 CD248Q9HCU0 757 aa7.04□□□□□ -1.28
HMGCS2-204ENST00000544913 SLC40A1Q9NP59 571 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms