RNA–Protein interactions for RNA: ENST00000544552.5

PAAF1-214, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-214ENST00000544552 TRAF2Q12933 501 aa12.8□□□□□ -0.36
PAAF1-214ENST00000544552 STX3Q13277 289 aa12.8□□□□□ -0.36
PAAF1-214ENST00000544552 PCLAFQ15004 111 aa12.8□□□□□ -0.36
PAAF1-214ENST00000544552 CHI3L2Q15782 390 aa12.8□□□□□ -0.36
PAAF1-214ENST00000544552 ZNF77Q15935 545 aa12.8□□□□□ -0.36
PAAF1-214ENST00000544552 LRIT3Q3SXY7 679 aa12.8□□□□□ -0.36
PAAF1-214ENST00000544552 MBLAC2Q68D91 279 aa12.8□□□□□ -0.36
PAAF1-214ENST00000544552 MRNIPQ6NTE8 343 aa12.8□□□□□ -0.36
PAAF1-214ENST00000544552 PTAR1Q7Z6K3 402 aaPredicted RBP12.8□□□□□ -0.36
PAAF1-214ENST00000544552 MFSD6LQ8IWD5 586 aa12.8□□□□□ -0.36
PAAF1-214ENST00000544552 OR6Y1Q8NGX8 325 aa12.8□□□□□ -0.36
PAAF1-214ENST00000544552 RDH11Q8TC12 318 aa12.8□□□□□ -0.36
PAAF1-214ENST00000544552 C10orf82Q8WW14 230 aa12.8□□□□□ -0.36
PAAF1-214ENST00000544552 ISG20Q96AZ6 181 aaKnown RBP12.8□□□□□ -0.36
PAAF1-214ENST00000544552 ZNF707Q96C28 371 aaPredicted RBP12.8□□□□□ -0.36
PAAF1-214ENST00000544552 CDKN2AIPNLQ96HQ2 116 aa12.8□□□□□ -0.36
PAAF1-214ENST00000544552 DNAJC1Q96KC8 554 aaKnown RBP12.8□□□□□ -0.36
PAAF1-214ENST00000544552 SMG9Q9H0W8 520 aaKnown RBP12.8□□□□□ -0.36
PAAF1-214ENST00000544552 ACTR5Q9H9F9 607 aaPredicted RBP12.8□□□□□ -0.36
PAAF1-214ENST00000544552 SLC28A3Q9HAS3 691 aa12.8□□□□□ -0.36
PAAF1-214ENST00000544552 NMRAL1Q9HBL8 299 aa12.8□□□□□ -0.36
PAAF1-214ENST00000544552 INTS6Q9UL03 887 aaKnown RBP12.8□□□□□ -0.36
PAAF1-214ENST00000544552 FCF1Q9Y324 198 aaKnown RBP12.8□□□□□ -0.36
PAAF1-214ENST00000544552 HCFC2Q9Y5Z7 792 aa12.8□□□□□ -0.36
PAAF1-214ENST00000544552 PDE4DIPQ5VU43 2346 aa12.79□□□□□ -0.36
PAAF1-214ENST00000544552 A0A087X1B8 175 aa12.79□□□□□ -0.36
PAAF1-214ENST00000544552 CSPG5O95196 566 aa12.79□□□□□ -0.36
PAAF1-214ENST00000544552 GOT2P00505 430 aaKnown RBP12.79□□□□□ -0.36
PAAF1-214ENST00000544552 SERPINE1P05121 402 aa12.79□□□□□ -0.36
PAAF1-214ENST00000544552 LPOP22079 712 aaPredicted RBP12.79□□□□□ -0.36
PAAF1-214ENST00000544552 CD70P32970 193 aa12.79□□□□□ -0.36
PAAF1-214ENST00000544552 SLC26A3P40879 764 aa12.79□□□□□ -0.36
PAAF1-214ENST00000544552 USP4Q13107 963 aa12.79□□□□□ -0.36
PAAF1-214ENST00000544552 DMC1Q14565 340 aa12.79□□□□□ -0.36
PAAF1-214ENST00000544552 TSNAXIP1Q2TAA8 658 aa12.79□□□□□ -0.36
PAAF1-214ENST00000544552 CNSTQ6PJW8 725 aa12.79□□□□□ -0.36
PAAF1-214ENST00000544552 RAPH1Q70E73 1250 aa12.79□□□□□ -0.36
PAAF1-214ENST00000544552 GLT6D1Q7Z4J2 308 aa12.79□□□□□ -0.36
PAAF1-214ENST00000544552 GRASPQ7Z6J2 395 aaPredicted RBP12.79□□□□□ -0.36
PAAF1-214ENST00000544552 RNF135Q8IUD6 432 aa12.79□□□□□ -0.36
PAAF1-214ENST00000544552 SLC41A1Q8IVJ1 513 aa12.79□□□□□ -0.36
PAAF1-214ENST00000544552 TTC16Q8NEE8 873 aa12.79□□□□□ -0.36
PAAF1-214ENST00000544552 LPCAT1Q8NF37 534 aa12.79□□□□□ -0.36
PAAF1-214ENST00000544552 MDGA1Q8NFP4 955 aa12.79□□□□□ -0.36
PAAF1-214ENST00000544552 OR4L1Q8NH43 312 aa12.79□□□□□ -0.36
PAAF1-214ENST00000544552 IRF7Q92985 503 aa12.79□□□□□ -0.36
PAAF1-214ENST00000544552 BHMTQ93088 406 aa12.79□□□□□ -0.36
PAAF1-214ENST00000544552 TSPAN17Q96FV3 270 aa12.79□□□□□ -0.36
PAAF1-214ENST00000544552 TSNARE1Q96NA8 513 aa12.79□□□□□ -0.36
PAAF1-214ENST00000544552 TCF12Q99081 682 aa12.79□□□□□ -0.36
PAAF1-214ENST00000544552 OMDQ99983 421 aa12.79□□□□□ -0.36
PAAF1-214ENST00000544552 NKX2-4Q9H2Z4 354 aa12.79□□□□□ -0.36
PAAF1-214ENST00000544552 MAGEE1Q9HCI5 957 aa12.79□□□□□ -0.36
PAAF1-214ENST00000544552 SPHK2Q9NRA0 654 aa12.79□□□□□ -0.36
PAAF1-214ENST00000544552 PLK2Q9NYY3 685 aa12.79□□□□□ -0.36
PAAF1-214ENST00000544552 COLQQ9Y215 455 aaPredicted RBP12.79□□□□□ -0.36
PAAF1-214ENST00000544552 HS3ST2Q9Y278 367 aa12.79□□□□□ -0.36
PAAF1-214ENST00000544552 SPO11Q9Y5K1 396 aa12.79□□□□□ -0.36
PAAF1-214ENST00000544552 ANKRD36A6QL64 1941 aa12.78□□□□□ -0.36
PAAF1-214ENST00000544552 CCDC162PA2VCL2 907 aa12.78□□□□□ -0.36
PAAF1-214ENST00000544552 H7C0S8 307 aa12.78□□□□□ -0.36
PAAF1-214ENST00000544552 SLC9A3R1O14745 358 aaPredicted RBP12.78□□□□□ -0.36
PAAF1-214ENST00000544552 CD3EAPO15446 510 aaKnown RBP12.78□□□□□ -0.36
PAAF1-214ENST00000544552 HTRA2O43464 458 aaPredicted RBP12.78□□□□□ -0.36
PAAF1-214ENST00000544552 SOCS5O75159 536 aa12.78□□□□□ -0.36
PAAF1-214ENST00000544552 DCTN3O75935 186 aa12.78□□□□□ -0.36
PAAF1-214ENST00000544552 KLHL2O95198 593 aa12.78□□□□□ -0.36
PAAF1-214ENST00000544552 F7P08709 466 aaPredicted RBP12.78□□□□□ -0.36
PAAF1-214ENST00000544552 FGF3P11487 239 aaPredicted RBP12.78□□□□□ -0.36
PAAF1-214ENST00000544552 HLA-FP30511 346 aa12.78□□□□□ -0.36
PAAF1-214ENST00000544552 GRIA4P48058 902 aa12.78□□□□□ -0.36
PAAF1-214ENST00000544552 PRKAA2P54646 552 aa12.78□□□□□ -0.36
PAAF1-214ENST00000544552 SLC12A2P55011 1212 aa12.78□□□□□ -0.36
PAAF1-214ENST00000544552 TAS2R39P59534 338 aa12.78□□□□□ -0.36
PAAF1-214ENST00000544552 TYSND1Q2T9J0 566 aa12.78□□□□□ -0.36
PAAF1-214ENST00000544552 GALNTL6Q49A17 601 aa12.78□□□□□ -0.36
PAAF1-214ENST00000544552 PITRM1Q5JRX3 1037 aa12.78□□□□□ -0.36
PAAF1-214ENST00000544552 SPDYAQ5MJ70 313 aa12.78□□□□□ -0.36
PAAF1-214ENST00000544552 ARMC12Q5T9G4 340 aa12.78□□□□□ -0.36
PAAF1-214ENST00000544552 PPP2R2DQ66LE6 453 aa12.78□□□□□ -0.36
PAAF1-214ENST00000544552 SDCCAG8Q86SQ7 713 aaPredicted RBP12.78□□□□□ -0.36
PAAF1-214ENST00000544552 TMEM25Q86YD3 366 aa12.78□□□□□ -0.36
PAAF1-214ENST00000544552 CEP97Q8IW35 865 aa12.78□□□□□ -0.36
PAAF1-214ENST00000544552 ADGRG2Q8IZP9 1017 aa12.78□□□□□ -0.36
PAAF1-214ENST00000544552 TMEM151AQ8N4L1 468 aa12.78□□□□□ -0.36
PAAF1-214ENST00000544552 OR13C4Q8NGS5 318 aa12.78□□□□□ -0.36
PAAF1-214ENST00000544552 RIN3Q8TB24 985 aa12.78□□□□□ -0.36
PAAF1-214ENST00000544552 ELMO2Q96JJ3 720 aa12.78□□□□□ -0.36
PAAF1-214ENST00000544552 RMDN2Q96LZ7 410 aa12.78□□□□□ -0.36
PAAF1-214ENST00000544552 SLC2A11Q9BYW1 496 aa12.78□□□□□ -0.36
PAAF1-214ENST00000544552 LMAN2LQ9H0V9 348 aa12.78□□□□□ -0.36
PAAF1-214ENST00000544552 FBXO6Q9NRD1 293 aaPredicted RBP12.78□□□□□ -0.36
PAAF1-214ENST00000544552 ZNF358Q9NW07 568 aa12.78□□□□□ -0.36
PAAF1-214ENST00000544552 MARK1Q9P0L2 795 aa12.78□□□□□ -0.36
PAAF1-214ENST00000544552 VWA7Q9Y334 891 aa12.78□□□□□ -0.36
PAAF1-214ENST00000544552 TARM1B6A8C7 271 aa12.77□□□□□ -0.36
PAAF1-214ENST00000544552 G3V2L1 256 aa12.77□□□□□ -0.36
PAAF1-214ENST00000544552 K7ERQ8 282 aa12.77□□□□□ -0.36
PAAF1-214ENST00000544552 TRAFD1O14545 582 aaPredicted RBP12.77□□□□□ -0.36
PAAF1-214ENST00000544552 AURKAO14965 403 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms